MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 69343 bp
Accession: NZ_CP124488 Location: 1..69343 Organism: Escherichia coli strain AVS0542 Replicon: plasmid pAVS0542-A
Accession: NZ_CP124488 Location: 1..69343 Organism: Escherichia coli strain AVS0542 Replicon: plasmid pAVS0542-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP68_RS24250 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QJP68_RS24255 (1263) | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| QJP68_RS24260 (2124) | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| QJP68_RS24265 (2679) | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP68_RS24270 (4074) | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP68_RS24275 (4695) | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QJP68_RS24280 (5440) | 5440..6144 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP68_RS24285 (6204) | 6204..6566 | - | 363 | Protein_7 | transposase | - |
| QJP68_RS24290 (6601) | 6601..7476 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP68_RS24295 (7790) | 7790..8494 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP68_RS24300 (8560) | 8560..9105 | + | 546 | Protein_10 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP68_RS24305 (9141) | 9141..9556 | - | 416 | Protein_11 | IS1 family transposase IS1R | Transposase |
| QJP68_RS24310 (9805) | 9805..10206 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP68_RS24315 (10139) | 10139..10396 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP68_RS24320 (10489) | 10489..11142 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP68_RS24325 (12082) | 12082..12939 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP68_RS24330 (12932) | 12932..13006 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP68_RS24335 (13243) | 13243..13497 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJP68_RS24340 (13794) | 13794..13928 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (13973) | 13973..14033 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13973) | 13973..14033 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13973) | 13973..14033 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (13973) | 13973..14033 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QJP68_RS24345 (14000) | 14000..14286 | - | 287 | Protein_19 | DUF2726 domain-containing protein | - |
| QJP68_RS24350 (14364) | 14364..15977 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP68_RS24355 (16008) | 16008..16358 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP68_RS24360 (16355) | 16355..16780 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP68_RS24365 (17339) | 17339..17551 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP68_RS24370 (17682) | 17682..18242 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP68_RS24375 (18297) | 18297..19043 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJP68_RS24380 (19063) | 19063..24333 | - | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP68_RS24385 (24333) | 24333..26567 | - | 2235 | WP_086908463.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP68_RS24390 (26564) | 26564..27343 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP68_RS24395 (27546) | 27546..28277 | - | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP68_RS24400 (28309) | 28309..28806 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJP68_RS24405 (28825) | 28825..31644 | - | 2820 | WP_001007062.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP68_RS24410 (31641) | 31641..33014 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP68_RS24415 (33001) | 33001..33393 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP68_RS24420 (33374) | 33374..33721 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJP68_RS24425 (33651) | 33651..34196 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP68_RS24430 (34183) | 34183..34467 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP68_RS24435 (34594) | 34594..34914 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QJP68_RS24445 (35715) | 35715..35957 | - | 243 | WP_001617878.1 | hypothetical protein | - |
| QJP68_RS24450 (35983) | 35983..36546 | - | 564 | WP_283187819.1 | class I SAM-dependent methyltransferase | - |
| QJP68_RS24455 (36594) | 36594..37955 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJP68_RS24460 (38007) | 38007..38237 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP68_RS24465 (39272) | 39272..39463 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP68_RS24470 (39460) | 39460..39882 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP68_RS24475 (39929) | 39929..40354 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP68_RS24480 (40771) | 40771..41547 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP68_RS24485 (41598) | 41598..42116 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP68_RS24490 (42046) | 42046..42267 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP68_RS24495 (42268) | 42268..42951 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJP68_RS24500 (43028) | 43028..43339 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJP68_RS24505 (43336) | 43336..44238 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJP68_RS24510 (44933) | 44933..45904 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP68_RS24515 (45904) | 45904..47070 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QJP68_RS24520 (47658) | 47658..48413 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP68_RS24525 (49187) | 49187..49993 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP68_RS24530 (49994) | 49994..50299 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP68_RS24535 (50301) | 50301..50519 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| QJP68_RS24540 (51227) | 51227..52222 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP68_RS24545 (52265) | 52265..53158 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJP68_RS24555 (54206) | 54206..57322 | - | 3117 | WP_001553854.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QJP68_RS24560 (57444) | 57444..58715 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| QJP68_RS24565 (58712) | 58712..60268 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| QJP68_RS24570 (60451) | 60451..60672 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QJP68_RS24575 (60672) | 60672..61052 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP68_RS24580 (61057) | 61057..61236 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP68_RS24585 (61264) | 61264..61542 | + | 279 | Protein_67 | pdcB | - |
| QJP68_RS24590 (61547) | 61547..61960 | + | 414 | Protein_68 | IS3 family transposase ISLad1 | Transposase |
| QJP68_RS24595 (61910) | 61910..62245 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP68_RS24600 (62455) | 62455..63435 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP68_RS24605 (63679) | 63679..65082 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP68_RS24610 (65069) | 65069..66001 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP68_RS24615 (66110) | 66110..66439 | - | 330 | Protein_73 | TOBE domain-containing protein | - |
| QJP68_RS24625 (67300) | 67300..67458 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP68_RS24630 (67617) | 67617..68588 | - | 972 | Protein_76 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|