MGE detailed information
MGE type: Conjugative plasmid MGE length: 95665 bp
Accession: NZ_CP124462 Location: 1..95665 Organism: Escherichia coli strain AVS0947 Replicon: plasmid pAVS0947-B
Accession: NZ_CP124462 Location: 1..95665 Organism: Escherichia coli strain AVS0947 Replicon: plasmid pAVS0947-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP79_RS25075 (1) | 1..1032 | + | 1032 | WP_000907863.1 | plasmid replication initiator RepA | - |
| QJP79_RS25080 (1938) | 1938..2222 | + | 285 | WP_024186511.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QJP79_RS25085 (2222) | 2222..2497 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP79_RS25090 (2572) | 2572..3072 | - | 501 | WP_024230392.1 | hypothetical protein | - |
| QJP79_RS25095 (3128) | 3128..3730 | - | 603 | WP_021560535.1 | ProQ/FINO family protein | - |
| QJP79_RS25100 (3906) | 3906..4241 | - | 336 | WP_242372526.1 | hypothetical protein | - |
| QJP79_RS25105 (4303) | 4303..4944 | - | 642 | WP_001473476.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QJP79_RS25110 (5099) | 5099..8077 | + | 2979 | WP_172905819.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| QJP79_RS25115 (8074) | 8074..8817 | - | 744 | WP_283201918.1 | hypothetical protein | - |
| QJP79_RS25120 (9029) | 9029..9619 | - | 591 | WP_021560534.1 | hypothetical protein | - |
| QJP79_RS25125 (9619) | 9619..9870 | - | 252 | WP_021560533.1 | hypothetical protein | - |
| QJP79_RS25130 (10161) | 10161..11954 | - | 1794 | WP_021560532.1 | DUF262 domain-containing protein | - |
| QJP79_RS25135 (12358) | 12358..13359 | + | 1002 | WP_000138754.1 | DUF4238 domain-containing protein | - |
| QJP79_RS25140 (13372) | 13372..13512 | - | 141 | WP_154071810.1 | hypothetical protein | - |
| QJP79_RS25145 (13543) | 13543..13887 | - | 345 | WP_000793772.1 | hypothetical protein | - |
| QJP79_RS25150 (14384) | 14384..14641 | - | 258 | WP_225379879.1 | hypothetical protein | - |
| QJP79_RS25155 (14682) | 14682..15608 | - | 927 | WP_001280608.1 | hypothetical protein | - |
| QJP79_RS25160 (16139) | 16139..16489 | + | 351 | WP_000493380.1 | hypothetical protein | - |
| QJP79_RS25165 (16548) | 16548..17369 | + | 822 | WP_001316850.1 | hypothetical protein | - |
| QJP79_RS25170 (17369) | 17369..18148 | + | 780 | WP_000147280.1 | site-specific integrase | - |
| QJP79_RS25175 (18327) | 18327..18971 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QJP79_RS25180 (19058) | 19058..19366 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| QJP79_RS25185 (19780) | 19780..20760 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QJP79_RS25190 (20753) | 20753..21169 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QJP79_RS25195 (21171) | 21171..22445 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| QJP79_RS25200 (22445) | 22445..22882 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QJP79_RS25205 (22879) | 22879..23127 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QJP79_RS25210 (23545) | 23545..24447 | + | 903 | WP_283201922.1 | DUF1281 domain-containing protein | - |
| QJP79_RS25215 (24444) | 24444..24755 | + | 312 | WP_032260789.1 | hypothetical protein | - |
| QJP79_RS25220 (24832) | 24832..25515 | + | 684 | WP_000086185.1 | DNA methylase | - |
| QJP79_RS25225 (25516) | 25516..25737 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| QJP79_RS25230 (25750) | 25750..26184 | + | 435 | WP_000274499.1 | DUF1380 family protein | - |
| QJP79_RS25235 (26229) | 26229..26999 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| QJP79_RS25240 (27416) | 27416..27841 | + | 426 | WP_283201919.1 | antirestriction protein | - |
| QJP79_RS25245 (27888) | 27888..28310 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP79_RS25250 (28307) | 28307..28498 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP79_RS25255 (28831) | 28831..28899 | - | 69 | Protein_36 | pilus protein | - |
| QJP79_RS25260 (29268) | 29268..29807 | + | 540 | WP_032151349.1 | single-stranded DNA-binding protein | - |
| QJP79_RS25265 (29870) | 29870..30103 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP79_RS25270 (30169) | 30169..32127 | + | 1959 | WP_283201920.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP79_RS25275 (32182) | 32182..32616 | + | 435 | WP_032151354.1 | conjugation system SOS inhibitor PsiB | - |
| QJP79_RS25280 (32613) | 32613..33332 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QJP79_RS25285 (33329) | 33329..33925 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QJP79_RS25290 (34388) | 34388..34888 | + | 501 | WP_000117621.1 | antirestriction protein ArdA | - |
| QJP79_RS25295 (35617) | 35617..36051 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QJP79_RS25300 (36145) | 36145..36411 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QJP79_RS25305 (36476) | 36476..37402 | + | 927 | WP_000038402.1 | ISNCY family transposase ISRor2 | VF |
| QJP79_RS25310 (37425) | 37425..37622 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| QJP79_RS25315 (37653) | 37653..37904 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QJP79_RS25320 (38484) | 38484..39332 | + | 849 | WP_021560542.1 | DUF4942 domain-containing protein | - |
| QJP79_RS25325 (39418) | 39418..39753 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QJP79_RS25330 (39987) | 39987..40319 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QJP79_RS25335 (40330) | 40330..43029 | + | 2700 | WP_283201921.1 | hypothetical protein | Relaxase |
| QJP79_RS25340 (43066) | 43066..45357 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QJP79_RS25345 (45350) | 45350..46420 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QJP79_RS25350 (46439) | 46439..47647 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (47827) | 47827..47884 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (47827) | 47827..47884 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (47827) | 47827..47884 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (47827) | 47827..47884 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QJP79_RS25355 (47939) | 47939..48091 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QJP79_RS25360 (48163) | 48163..48414 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QJP79_RS25365 (48913) | 48913..49008 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QJP79_RS25370 (49073) | 49073..49249 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| QJP79_RS25375 (49773) | 49773..50792 | + | 1020 | WP_000875212.1 | IS110 family transposase ISEc66 | Transposase |
| QJP79_RS25380 (51073) | 51073..51282 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QJP79_RS25385 (51354) | 51354..52004 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QJP79_RS25390 (52078) | 52078..54246 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| QJP79_RS25395 (54343) | 54343..54927 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QJP79_RS25400 (54956) | 54956..56158 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QJP79_RS25405 (56125) | 56125..56739 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| QJP79_RS25410 (56739) | 56739..59783 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| QJP79_RS25415 (59873) | 59873..60673 | - | 801 | WP_283201916.1 | IncI1-type conjugal transfer protein TraT | - |
| QJP79_RS25420 (60657) | 60657..60845 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QJP79_RS25425 (60909) | 60909..61313 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| QJP79_RS25430 (61364) | 61364..61891 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QJP79_RS25435 (61891) | 61891..62595 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QJP79_RS25440 (62595) | 62595..63884 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| QJP79_RS25445 (63887) | 63887..64870 | - | 984 | WP_283201917.1 | hypothetical protein | VF |
| QJP79_RS25450 (64881) | 64881..65573 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| QJP79_RS25455 (65570) | 65570..65917 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QJP79_RS25460 (65935) | 65935..69702 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| QJP79_RS25465 (69791) | 69791..70342 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QJP79_RS25470 (70357) | 70357..70647 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QJP79_RS25475 (70644) | 70644..71792 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QJP79_RS25480 (71789) | 71789..72607 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QJP79_RS25485 (72604) | 72604..72978 | - | 375 | Protein_82 | IncI1-type conjugal transfer lipoprotein TraH | - |
| QJP79_RS25495 (74806) | 74806..75390 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QJP79_RS25500 (75450) | 75450..76652 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QJP79_RS25505 (76737) | 76737..77561 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QJP79_RS25510 (77712) | 77712..78866 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QJP79_RS25515 (78865) | 78865..79140 | + | 276 | WP_000958118.1 | hypothetical protein | - |
| QJP79_RS25520 (79137) | 79137..80561 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| QJP79_RS25525 (80561) | 80561..81217 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QJP79_RS25530 (81202) | 81202..81762 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QJP79_RS25535 (81772) | 81772..82386 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QJP79_RS25540 (82404) | 82404..83501 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QJP79_RS25545 (83514) | 83514..85067 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QJP79_RS25550 (85078) | 85078..85530 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QJP79_RS25555 (85517) | 85517..86812 | - | 1296 | WP_021560540.1 | hypothetical protein | VF |
| QJP79_RS25560 (86805) | 86805..88487 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QJP79_RS25565 (88501) | 88501..88938 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QJP79_RS25570 (88938) | 88938..90005 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| QJP79_RS25575 (90679) | 90679..91131 | - | 453 | WP_000008894.1 | hypothetical protein | - |
| QJP79_RS25580 (91174) | 91174..91428 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QJP79_RS25585 (91590) | 91590..92141 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QJP79_RS25590 (92314) | 92314..92997 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QJP79_RS25595 (93250) | 93250..93783 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| QJP79_RS25600 (94225) | 94225..94512 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QJP79_RS25605 (94430) | 94430..94660 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|