MGE detailed information
MGE type: Conjugative plasmid MGE length: 82934 bp
Accession: NZ_CP124443 Location: 1..82934 Organism: Escherichia coli strain AVS0196 Replicon: plasmid pAVS0196-A
Accession: NZ_CP124443 Location: 1..82934 Organism: Escherichia coli strain AVS0196 Replicon: plasmid pAVS0196-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP94_RS25390 (1) | 1..858 | + | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP94_RS25395 (1798) | 1798..2451 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP94_RS25400 (2544) | 2544..2801 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP94_RS25405 (2734) | 2734..3135 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP94_RS25410 (3384) | 3384..3799 | + | 416 | Protein_4 | IS1 family transposase IS1R | Transposase |
| QJP94_RS25415 (3835) | 3835..4221 | - | 387 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP94_RS25420 (4273) | 4273..4977 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP94_RS25425 (5040) | 5040..5276 | - | 237 | Protein_7 | IS6 family transposase IS15 | Transposase |
| QJP94_RS25430 (5273) | 5273..6646 | - | 1374 | WP_000944328.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP94_RS25435 (6633) | 6633..7025 | - | 393 | WP_000659962.1 | F-type conjugal transfer protein TrbF | - |
| QJP94_RS25440 (7006) | 7006..7353 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| QJP94_RS25445 (7283) | 7283..7828 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP94_RS25450 (7815) | 7815..8099 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP94_RS25455 (8226) | 8226..8546 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| QJP94_RS25465 (9494) | 9494..10171 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| QJP94_RS25470 (10305) | 10305..10688 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP94_RS25475 (11031) | 11031..11621 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| QJP94_RS25480 (11918) | 11918..12739 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QJP94_RS25485 (12858) | 12858..13145 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QJP94_RS25490 (13170) | 13170..13376 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| QJP94_RS25495 (13446) | 13446..13619 | + | 174 | Protein_21 | hypothetical protein | - |
| QJP94_RS25500 (13617) | 13617..13847 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP94_RS25505 (14067) | 14067..14192 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP94_RS25510 (14134) | 14134..14283 | - | 150 | Protein_24 | plasmid maintenance protein Mok | - |
| - (14269) | 14269..14309 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (14269) | 14269..14309 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (14269) | 14269..14309 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (14269) | 14269..14309 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - (15753) | 15753..15939 | - | 187 | NuclAT_0 | - | - |
| - (15753) | 15753..15939 | - | 187 | NuclAT_0 | - | - |
| - (15753) | 15753..15939 | - | 187 | NuclAT_0 | - | - |
| - (15753) | 15753..15939 | - | 187 | NuclAT_0 | - | - |
| QJP94_RS25520 (15908) | 15908..16670 | - | 763 | Protein_26 | plasmid SOS inhibition protein A | - |
| QJP94_RS25525 (16667) | 16667..17101 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| QJP94_RS25530 (17156) | 17156..19114 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP94_RS25535 (19180) | 19180..19413 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP94_RS25540 (19476) | 19476..20015 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| QJP94_RS25545 (20041) | 20041..20247 | - | 207 | WP_000547975.1 | hypothetical protein | - |
| QJP94_RS25550 (20160) | 20160..20495 | - | 336 | WP_013023883.1 | hypothetical protein | - |
| QJP94_RS25555 (20488) | 20488..20751 | - | 264 | WP_071781663.1 | hypothetical protein | - |
| QJP94_RS25560 (20658) | 20658..20876 | - | 219 | WP_001496291.1 | hypothetical protein | - |
| QJP94_RS25565 (20902) | 20902..21465 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP94_RS25570 (21513) | 21513..22874 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| QJP94_RS25575 (22926) | 22926..23156 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP94_RS25580 (24191) | 24191..24382 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP94_RS25585 (24379) | 24379..24801 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP94_RS25590 (24848) | 24848..25273 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP94_RS25595 (25690) | 25690..26466 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP94_RS25600 (26517) | 26517..27035 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QJP94_RS25605 (26965) | 26965..27186 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP94_RS25610 (27187) | 27187..27870 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJP94_RS25615 (27947) | 27947..28258 | - | 312 | WP_032143366.1 | hypothetical protein | - |
| QJP94_RS25620 (28255) | 28255..29157 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QJP94_RS25625 (30024) | 30024..30995 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP94_RS25630 (30995) | 30995..32161 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QJP94_RS25635 (32749) | 32749..33504 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP94_RS25640 (34278) | 34278..35084 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP94_RS25645 (35085) | 35085..35390 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP94_RS25650 (35392) | 35392..35610 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| QJP94_RS25655 (36318) | 36318..37313 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJP94_RS25660 (37356) | 37356..38249 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJP94_RS25670 (39139) | 39139..41706 | - | 2568 | Protein_56 | HsdR family type I site-specific deoxyribonuclease | - |
| QJP94_RS25675 (41828) | 41828..43099 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| QJP94_RS25680 (43096) | 43096..44652 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| QJP94_RS25685 (44835) | 44835..45056 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QJP94_RS25690 (45056) | 45056..45436 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJP94_RS25695 (45441) | 45441..45620 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJP94_RS25700 (45648) | 45648..45926 | + | 279 | Protein_62 | pdcB | - |
| QJP94_RS25705 (45931) | 45931..46344 | + | 414 | Protein_63 | IS3 family transposase ISLad1 | Transposase |
| QJP94_RS25710 (46294) | 46294..46629 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJP94_RS25715 (46839) | 46839..47819 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJP94_RS25720 (48063) | 48063..49466 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJP94_RS25725 (49453) | 49453..50385 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJP94_RS25730 (50494) | 50494..50823 | - | 330 | Protein_68 | TOBE domain-containing protein | - |
| QJP94_RS25740 (51684) | 51684..51842 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJP94_RS25745 (52001) | 52001..52480 | - | 480 | Protein_71 | hypothetical protein | - |
| QJP94_RS25750 (52543) | 52543..53247 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP94_RS25755 (53302) | 53302..54924 | - | 1623 | Protein_73 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP94_RS25760 (54971) | 54971..55675 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP94_RS25765 (55736) | 55736..55912 | + | 177 | Protein_75 | replication protein C, IncQ-type | - |
| QJP94_RS25770 (56220) | 56220..57035 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJP94_RS25775 (57096) | 57096..57899 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QJP94_RS25780 (57899) | 57899..58735 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| QJP94_RS25785 (58789) | 58789..59025 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| QJP94_RS25790 (59057) | 59057..59683 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJP94_RS25795 (59789) | 59789..60988 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJP94_RS25800 (61020) | 61020..61352 | - | 333 | Protein_82 | EamA family transporter | - |
| QJP94_RS25805 (61405) | 61405..62109 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP94_RS25810 (62169) | 62169..62531 | - | 363 | Protein_84 | transposase | - |
| QJP94_RS25815 (62566) | 62566..63441 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP94_RS25820 (63755) | 63755..64459 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP94_RS25825 (64506) | 64506..67103 | + | 2598 | Protein_87 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP94_RS25830 (67122) | 67122..67619 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| QJP94_RS25835 (67651) | 67651..68382 | + | 732 | WP_000850429.1 | conjugal transfer complement resistance protein TraT | - |
| QJP94_RS25840 (68585) | 68585..69364 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| QJP94_RS25845 (69361) | 69361..71541 | + | 2181 | WP_016238500.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP94_RS25850 (71541) | 71541..76811 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP94_RS25855 (76831) | 76831..77577 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QJP94_RS25860 (77632) | 77632..78192 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP94_RS25865 (78323) | 78323..78535 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP94_RS25870 (79094) | 79094..79519 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP94_RS25875 (79516) | 79516..79866 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP94_RS25880 (79897) | 79897..81510 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP94_RS25885 (81588) | 81588..81874 | + | 287 | Protein_99 | DUF2726 domain-containing protein | - |
| - (81841) | 81841..81901 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (81841) | 81841..81901 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (81841) | 81841..81901 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| - (81841) | 81841..81901 | - | 61 | NuclAT_2 | - | Antitoxin Detail |
| QJP94_RS25890 (81946) | 81946..82080 | + | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| QJP94_RS25895 (82377) | 82377..82631 | + | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|