MGE detailed information
MGE type: Conjugative plasmid MGE length: 74054 bp
Accession: NZ_CP124407 Location: 1..74054 Organism: Escherichia coli strain AVS0935 Replicon: plasmid pAVS0935-B
Accession: NZ_CP124407 Location: 1..74054 Organism: Escherichia coli strain AVS0935 Replicon: plasmid pAVS0935-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB05_RS24445 (1) | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| QJB05_RS24450 (1768) | 1768..1905 | + | 138 | Protein_1 | XRE family transcriptional regulator | - |
| QJB05_RS24455 (1925) | 1925..2188 | + | 264 | WP_001089473.1 | hypothetical protein | - |
| QJB05_RS24460 (2178) | 2178..2477 | + | 300 | WP_001528606.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QJB05_RS24465 (2513) | 2513..3178 | - | 666 | WP_001535733.1 | hypothetical protein | - |
| QJB05_RS24470 (3366) | 3366..4226 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QJB05_RS24475 (4409) | 4409..4966 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QJB05_RS24480 (5130) | 5130..8135 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJB05_RS24485 (8703) | 8703..9266 | - | 564 | WP_000351266.1 | pentapeptide repeat-containing protein | - |
| QJB05_RS24490 (9270) | 9270..10001 | - | 732 | WP_000155032.1 | ATP-binding cassette domain-containing protein | - |
| QJB05_RS24495 (9998) | 9998..10723 | - | 726 | WP_000258040.1 | microcin B17 immunity protein McbE | - |
| QJB05_RS24500 (10733) | 10733..11872 | - | 1140 | WP_224223109.1 | YcaO-like family protein | - |
| QJB05_RS24505 (11904) | 11904..12722 | - | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| QJB05_RS24510 (12724) | 12724..13578 | - | 855 | WP_016235969.1 | McbB family protein | - |
| QJB05_RS24515 (13638) | 13638..13847 | - | 210 | WP_001535752.1 | microcin B17 family TOMM | - |
| QJB05_RS24520 (14377) | 14377..14829 | + | 453 | WP_000670962.1 | acyltransferase | - |
| QJB05_RS24525 (15232) | 15232..15582 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| QJB05_RS24530 (15585) | 15585..16547 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| QJB05_RS24535 (16695) | 16695..16988 | + | 294 | WP_002430945.1 | hypothetical protein | - |
| QJB05_RS24540 (17083) | 17083..17985 | + | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| QJB05_RS24545 (17982) | 17982..18293 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| QJB05_RS24550 (18369) | 18369..19052 | + | 684 | WP_000086169.1 | DNA methylase | - |
| QJB05_RS24555 (19053) | 19053..19274 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QJB05_RS24560 (19204) | 19204..19722 | + | 519 | WP_227910476.1 | DUF1380 family protein | - |
| QJB05_RS24565 (19767) | 19767..20537 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| QJB05_RS24570 (20953) | 20953..21378 | + | 426 | WP_001198891.1 | antirestriction protein | - |
| QJB05_RS24575 (21425) | 21425..21844 | + | 420 | WP_000271737.1 | DUF1380 family protein | - |
| QJB05_RS24580 (21844) | 21844..22035 | + | 192 | WP_001027049.1 | hypothetical protein | - |
| QJB05_RS24585 (22014) | 22014..22485 | - | 472 | Protein_28 | hypothetical protein | - |
| QJB05_RS24590 (23003) | 23003..23233 | + | 231 | WP_000218644.1 | hypothetical protein | - |
| QJB05_RS24595 (23285) | 23285..24646 | + | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| QJB05_RS24600 (24693) | 24693..25256 | + | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| QJB05_RS24605 (25342) | 25342..25773 | - | 432 | Protein_32 | hypothetical protein | - |
| QJB05_RS24610 (26075) | 26075..26602 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| QJB05_RS24615 (26660) | 26660..26893 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| QJB05_RS24620 (26954) | 26954..28918 | + | 1965 | WP_000117316.1 | ParB/RepB/Spo0J family partition protein | - |
| QJB05_RS24625 (28987) | 28987..29421 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| QJB05_RS24630 (29418) | 29418..30180 | + | 763 | Protein_37 | plasmid SOS inhibition protein A | - |
| QJB05_RS24635 (30158) | 30158..30337 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - (30149) | 30149..30373 | + | 225 | NuclAT_0 | - | - |
| - (30149) | 30149..30373 | + | 225 | NuclAT_0 | - | - |
| - (30149) | 30149..30373 | + | 225 | NuclAT_0 | - | - |
| - (30149) | 30149..30373 | + | 225 | NuclAT_0 | - | - |
| QJB05_RS24640 (30359) | 30359..30508 | + | 150 | Protein_39 | plasmid maintenance protein Mok | - |
| QJB05_RS24645 (30450) | 30450..30575 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJB05_RS24650 (30894) | 30894..31191 | - | 298 | Protein_41 | hypothetical protein | - |
| QJB05_RS24655 (31491) | 31491..31787 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| QJB05_RS24660 (31898) | 31898..32719 | + | 822 | WP_283187968.1 | DUF932 domain-containing protein | - |
| QJB05_RS24665 (33016) | 33016..33525 | - | 510 | WP_000759173.1 | hypothetical protein | VF |
| QJB05_RS24670 (33939) | 33939..34322 | + | 384 | WP_001151538.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJB05_RS24675 (34509) | 34509..35198 | + | 690 | WP_016239105.1 | conjugal transfer transcriptional regulator TraJ | - |
| QJB05_RS24680 (35291) | 35291..35692 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QJB05_RS24685 (35725) | 35725..36084 | + | 360 | WP_019842162.1 | type IV conjugative transfer system pilin TraA | - |
| QJB05_RS24690 (36099) | 36099..36410 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| QJB05_RS24695 (36432) | 36432..36998 | + | 567 | WP_000399801.1 | type IV conjugative transfer system protein TraE | - |
| QJB05_RS24700 (36985) | 36985..37713 | + | 729 | WP_001230771.1 | type-F conjugative transfer system secretin TraK | - |
| QJB05_RS24705 (37713) | 37713..38393 | + | 681 | Protein_52 | conjugal transfer protein TraB | - |
| QJB05_RS24710 (38422) | 38422..40035 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJB05_RS24715 (40066) | 40066..40416 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJB05_RS24720 (40413) | 40413..40838 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJB05_RS24725 (40925) | 40925..41704 | + | 780 | Protein_56 | F-type conjugal transfer pilus assembly protein TraB | - |
| QJB05_RS24730 (41694) | 41694..42260 | + | 567 | WP_000896598.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QJB05_RS24735 (42247) | 42247..42564 | + | 318 | WP_001057297.1 | conjugal transfer protein TrbD | - |
| QJB05_RS24740 (42564) | 42564..43079 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QJB05_RS24745 (43214) | 43214..43435 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| QJB05_RS24750 (43428) | 43428..43905 | + | 478 | Protein_61 | hypothetical protein | - |
| QJB05_RS24755 (43985) | 43985..44203 | + | 219 | WP_000556746.1 | hypothetical protein | - |
| QJB05_RS24760 (44570) | 44570..47200 | + | 2631 | WP_000069778.1 | type IV secretion system protein TraC | - |
| QJB05_RS24765 (47197) | 47197..47583 | + | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| QJB05_RS24770 (47580) | 47580..48212 | + | 633 | WP_283187967.1 | type-F conjugative transfer system protein TraW | - |
| QJB05_RS24775 (48209) | 48209..49201 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QJB05_RS24780 (49231) | 49231..49536 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| QJB05_RS24785 (49545) | 49545..50183 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QJB05_RS24790 (50180) | 50180..52030 | + | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QJB05_RS24795 (52057) | 52057..52314 | + | 258 | WP_000864329.1 | conjugal transfer protein TrbE | - |
| QJB05_RS24800 (52307) | 52307..53050 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QJB05_RS24805 (53064) | 53064..53408 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| QJB05_RS24810 (53527) | 53527..53811 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJB05_RS24815 (53798) | 53798..54343 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJB05_RS24820 (54273) | 54273..54620 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| QJB05_RS24825 (54601) | 54601..54993 | + | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| QJB05_RS24830 (54980) | 54980..56353 | + | 1374 | WP_001535740.1 | conjugal transfer pilus assembly protein TraH | - |
| QJB05_RS24835 (56350) | 56350..59175 | + | 2826 | WP_039719946.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJB05_RS24840 (59172) | 59172..59681 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QJB05_RS24845 (59695) | 59695..60426 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| QJB05_RS24850 (60629) | 60629..61366 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| QJB05_RS24855 (61417) | 61417..63579 | + | 2163 | WP_044061368.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJB05_RS24860 (63579) | 63579..68849 | + | 5271 | WP_119164008.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJB05_RS24865 (68869) | 68869..69615 | + | 747 | WP_019842127.1 | conjugal transfer pilus acetylase TraX | - |
| QJB05_RS24870 (69670) | 69670..70227 | + | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| QJB05_RS24875 (70379) | 70379..70582 | + | 204 | WP_001336517.1 | hypothetical protein | - |
| QJB05_RS24880 (71324) | 71324..71785 | + | 462 | WP_019842128.1 | thermonuclease family protein | - |
| QJB05_RS24885 (72054) | 72054..72272 | + | 219 | WP_023150739.1 | hypothetical protein | - |
| QJB05_RS24890 (72425) | 72425..72862 | + | 438 | WP_000872609.1 | hypothetical protein | - |
| - (72957) | 72957..73013 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (72957) | 72957..73013 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (72957) | 72957..73013 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (72957) | 72957..73013 | - | 57 | NuclAT_1 | - | Antitoxin Detail |
| QJB05_RS24895 (73061) | 73061..73210 | + | 150 | WP_001336447.1 | Hok/Gef family protein | Toxin Detail |
| QJB05_RS24900 (73495) | 73495..73752 | + | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| QJB05_RS24905 (73857) | 73857..74042 | + | 186 | WP_012615301.1 | plasmid copy control protein CopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|