MGE detailed information
MGE type: IScluster/Tn MGE length: 8786 bp
Accession: NZ_CP124388 Location: 92156..100941 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-A
Accession: NZ_CP124388 Location: 92156..100941 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB01_RS25045 (88048) | 88048..88854 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJB01_RS25050 (88855) | 88855..89160 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJB01_RS25055 (89162) | 89162..89380 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJB01_RS25060 (90088) | 90088..91083 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QJB01_RS25065 (91126) | 91126..92019 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QJB01_RS25075 (92887) | 92887..94377 | - | 1491 | WP_171876359.1 | type I restriction-modification system subunit M | - |
| QJB01_RS25080 (94560) | 94560..94781 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QJB01_RS25085 (94781) | 94781..95161 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QJB01_RS25090 (95166) | 95166..95345 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QJB01_RS25095 (95373) | 95373..95651 | + | 279 | Protein_108 | pdcB | - |
| QJB01_RS25100 (95656) | 95656..96069 | + | 414 | Protein_109 | IS3 family transposase ISLad1 | Transposase |
| QJB01_RS25105 (96019) | 96019..96354 | - | 336 | WP_169329198.1 | type I deoxyribonuclease HsdR | - |
| QJB01_RS25110 (96564) | 96564..97544 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| QJB01_RS25115 (97788) | 97788..99191 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| QJB01_RS25120 (99178) | 99178..100110 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| QJB01_RS25125 (100219) | 100219..100548 | - | 330 | Protein_114 | TOBE domain-containing protein | - |
| QJB01_RS25135 (101409) | 101409..101567 | + | 159 | WP_228955855.1 | abortive infection family protein | - |
| QJB01_RS25140 (101726) | 101726..102697 | - | 972 | Protein_117 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|