MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124359 Location: 4524122..4565045 Organism: Escherichia coli strain AVS0093 Replicon: chromosome
Accession: NZ_CP124359 Location: 4524122..4565045 Organism: Escherichia coli strain AVS0093 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP83_RS22065 (4519554) | 4519554..4520372 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP83_RS22070 (4520395) | 4520395..4520973 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP83_RS22080 (4522951) | 4522951..4524129 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP83_RS22085 (4524122) | 4524122..4525573 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP83_RS22090 (4525648) | 4525648..4525781 | - | 134 | Protein_4334 | phosphate-starvation-inducible protein PsiE | - |
| QJP83_RS22095 (4525783) | 4525783..4525899 | - | 117 | Protein_4335 | phosphoporin PhoE | - |
| QJP83_RS22100 (4526197) | 4526197..4526831 | + | 635 | Protein_4336 | IS3 family transposase IS2 | Transposase |
| QJP83_RS22105 (4526887) | 4526887..4527765 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP83_RS22110 (4528093) | 4528093..4528824 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP83_RS22115 (4530307) | 4530307..4531530 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP83_RS22120 (4531631) | 4531631..4532515 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP83_RS22125 (4532718) | 4532718..4533398 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP83_RS22130 (4533546) | 4533546..4534223 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP83_RS22135 (4534229) | 4534229..4534462 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP83_RS22140 (4534552) | 4534552..4535370 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP83_RS22145 (4535461) | 4535461..4535946 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP83_RS22150 (4535961) | 4535961..4536437 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP83_RS22155 (4536506) | 4536506..4536727 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP83_RS22160 (4536806) | 4536806..4537174 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP83_RS22165 (4537264) | 4537264..4537641 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP83_RS22170 (4537638) | 4537638..4538126 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP83_RS22175 (4538138) | 4538138..4538335 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP83_RS22180 (4538420) | 4538420..4539274 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP83_RS22185 (4539592) | 4539592..4539751 | + | 160 | Protein_4353 | integrase | - |
| QJP83_RS22190 (4540011) | 4540011..4541549 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP83_RS22195 (4541915) | 4541915..4543249 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP83_RS22200 (4543329) | 4543329..4545476 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP83_RS22205 (4545535) | 4545535..4546992 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP83_RS22210 (4547229) | 4547229..4548746 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP83_RS22215 (4548865) | 4548865..4549038 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP83_RS22220 (4549066) | 4549066..4549362 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP83_RS22225 (4549590) | 4549590..4549862 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP83_RS22230 (4550076) | 4550076..4554005 | - | 3930 | WP_001080127.1 | hypothetical protein | VF |
| QJP83_RS22235 (4555160) | 4555160..4555990 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP83_RS22240 (4556888) | 4556888..4560739 | - | 3852 | WP_012896891.1 | hypothetical protein | VF |
| QJP83_RS22245 (4561145) | 4561145..4561714 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP83_RS22250 (4561776) | 4561776..4562480 | + | 705 | WP_001227591.1 | hypothetical protein | VF |
| QJP83_RS22255 (4562508) | 4562508..4565045 | + | 2538 | WP_000866257.1 | hypothetical protein | VF |
| QJP83_RS22260 (4565155) | 4565155..4565427 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP83_RS22265 (4565439) | 4565439..4565669 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP83_RS22270 (4565850) | 4565850..4567481 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP83_RS22275 (4567478) | 4567478..4568197 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|