MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124334 Location: 2392237..2433160 Organism: Escherichia coli strain AVS0786 Replicon: chromosome
Accession: NZ_CP124334 Location: 2392237..2433160 Organism: Escherichia coli strain AVS0786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP89_RS11875 (2387669) | 2387669..2388487 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP89_RS11880 (2388510) | 2388510..2389088 | - | 579 | WP_282517614.1 | TetR/AcrR family transcriptional regulator | - |
| QJP89_RS11890 (2391066) | 2391066..2392244 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP89_RS11895 (2392237) | 2392237..2393688 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP89_RS11900 (2393763) | 2393763..2393896 | - | 134 | Protein_2339 | phosphate-starvation-inducible protein PsiE | - |
| QJP89_RS11905 (2393898) | 2393898..2394014 | - | 117 | Protein_2340 | phosphoporin PhoE | - |
| QJP89_RS11910 (2394312) | 2394312..2394946 | + | 635 | Protein_2341 | IS3 family transposase IS2 | Transposase |
| QJP89_RS11915 (2395002) | 2395002..2395880 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP89_RS11920 (2396208) | 2396208..2396939 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP89_RS11925 (2398422) | 2398422..2399645 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP89_RS11930 (2399746) | 2399746..2400630 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP89_RS11935 (2400833) | 2400833..2401513 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP89_RS11940 (2401661) | 2401661..2402338 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP89_RS11945 (2402344) | 2402344..2402577 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP89_RS11950 (2402667) | 2402667..2403485 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP89_RS11955 (2403576) | 2403576..2404061 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP89_RS11960 (2404076) | 2404076..2404552 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJP89_RS11965 (2404621) | 2404621..2404842 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP89_RS11970 (2404921) | 2404921..2405289 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP89_RS11975 (2405379) | 2405379..2405756 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP89_RS11980 (2405753) | 2405753..2406241 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP89_RS11985 (2406253) | 2406253..2406450 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP89_RS11990 (2406535) | 2406535..2407389 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP89_RS11995 (2407707) | 2407707..2407866 | + | 160 | Protein_2358 | integrase | - |
| QJP89_RS12000 (2408126) | 2408126..2409664 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP89_RS12005 (2410030) | 2410030..2411364 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP89_RS12010 (2411444) | 2411444..2413591 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP89_RS12015 (2413650) | 2413650..2415107 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP89_RS12020 (2415344) | 2415344..2416861 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP89_RS12025 (2416980) | 2416980..2417153 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP89_RS12030 (2417181) | 2417181..2417477 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP89_RS12035 (2417705) | 2417705..2417977 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP89_RS12040 (2418191) | 2418191..2422120 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP89_RS12045 (2423275) | 2423275..2424105 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP89_RS12050 (2425003) | 2425003..2428854 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP89_RS12055 (2429260) | 2429260..2429829 | + | 570 | WP_282517615.1 | hypothetical protein | - |
| QJP89_RS12060 (2429891) | 2429891..2430595 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP89_RS12065 (2430623) | 2430623..2433160 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP89_RS12070 (2433270) | 2433270..2433542 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP89_RS12075 (2433554) | 2433554..2433784 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP89_RS12080 (2433965) | 2433965..2435596 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP89_RS12085 (2435593) | 2435593..2436312 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|