MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP123963 Location: 4161258..4170609 Organism: Escherichia coli strain L6-21 Replicon: chromosome
Accession: NZ_CP123963 Location: 4161258..4170609 Organism: Escherichia coli strain L6-21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC817_RS20425 (4156419) | 4156419..4157720 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QC817_RS20430 (4157836) | 4157836..4158174 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QC817_RS20435 (4158150) | 4158150..4159847 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| QC817_RS20440 (4159884) | 4159884..4160459 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QC817_RS20450 (4161258) | 4161258..4162796 | + | 1539 | WP_097730980.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QC817_RS20455 (4163162) | 4163162..4164496 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QC817_RS20460 (4164576) | 4164576..4166723 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QC817_RS20465 (4166782) | 4166782..4168239 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| QC817_RS20470 (4168476) | 4168476..4169993 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QC817_RS20475 (4170112) | 4170112..4170285 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QC817_RS20480 (4170313) | 4170313..4170609 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QC817_RS20485 (4170836) | 4170836..4171108 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QC817_RS20490 (4171120) | 4171120..4171350 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QC817_RS20495 (4171531) | 4171531..4173162 | + | 1632 | WP_152949980.1 | sensor histidine kinase | - |
| QC817_RS20500 (4173159) | 4173159..4173878 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |