MGE detailed information
MGE type: Genomic_island MGE length: 49523 bp
Accession: NZ_CP123660 Location: 3638491..3688013 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain CVM N38232 Replicon: chromosome
Accession: NZ_CP123660 Location: 3638491..3688013 Organism: Salmonella enterica subsp. enterica serovar Kentucky strain CVM N38232 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DE22_RS17590 () | 3634108..3636552 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| DE22_RS17595 () | 3636661..3637428 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| DE22_RS17600 () | 3637738..3638145 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| DE22_RS17605 () | 3638491..3639210 | + | 720 | WP_000787607.1 | Outer membrane protein PagN | VF |
| DE22_RS17610 () | 3639214..3639429 | - | 216 | WP_001575654.1 | hypothetical protein | - |
| DE22_RS17615 () | 3639549..3640496 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| DE22_RS17620 () | 3640988..3641228 | - | 241 | Protein_3446 | PerC family transcriptional regulator | - |
| DE22_RS17625 () | 3641311..3642132 | - | 822 | WP_000119391.1 | polysaccharide deacetylase family protein | - |
| DE22_RS17630 () | 3642540..3643010 | - | 471 | WP_000266935.1 | AfaD family invasin | - |
| DE22_RS17635 () | 3643032..3645542 | - | 2511 | WP_000669615.1 | F1 capsule-anchoring protein | VF |
| DE22_RS17640 () | 3645566..3646304 | - | 739 | Protein_3450 | Chaperone protein caf1M | VF |
| DE22_RS17645 () | 3646388..3646885 | - | 498 | WP_000835844.1 | Saf-pilin pilus formation protein SafA | - |
| DE22_RS17650 () | 3647646..3648350 | - | 705 | Protein_3452 | integrase core domain-containing protein | - |
| DE22_RS17655 () | 3648403..3648717 | + | 315 | WP_001539118.1 | SymE family type I addiction module toxin | - |
| DE22_RS17660 () | 3648783..3649061 | - | 279 | WP_077905245.1 | hypothetical protein | - |
| DE22_RS17665 () | 3649378..3649845 | - | 468 | WP_000828176.1 | hypothetical protein | - |
| DE22_RS17670 () | 3649842..3650213 | - | 372 | WP_223154463.1 | hypothetical protein | - |
| DE22_RS17675 () | 3650717..3650950 | - | 234 | WP_129589482.1 | hypothetical protein | - |
| DE22_RS17680 () | 3651284..3651529 | + | 246 | WP_000994223.1 | hypothetical protein | Toxin Detail |
| DE22_RS17685 () | 3651593..3652039 | - | 447 | WP_000171103.1 | hypothetical protein | - |
| DE22_RS17690 () | 3652036..3653535 | - | 1500 | Protein_3460 | Putative deoxyribonuclease RhsC | VF |
| - | 3653582..3653833 | - | 252 | - | - | Antitoxin Detail |
| DE22_RS17695 () | 3653616..3653843 | + | 228 | WP_022630712.1 | SymE family type I addiction module toxin | Toxin Detail |
| DE22_RS17700 () | 3653890..3654324 | - | 435 | WP_000789494.1 | hypothetical protein | - |
| DE22_RS17705 () | 3654321..3659027 | - | 4707 | WP_001529574.1 | RHS repeat-associated core domain-containing protein | - |
| DE22_RS17710 () | 3659043..3659501 | - | 459 | WP_000186513.1 | DcrB-related protein | - |
| DE22_RS17715 () | 3659561..3661795 | - | 2235 | WP_000011526.1 | hypothetical protein | VF |
| DE22_RS17720 () | 3662192..3662713 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| DE22_RS17725 () | 3662737..3663153 | - | 417 | WP_023139580.1 | DUF2195 family protein | - |
| DE22_RS17730 () | 3663150..3663359 | - | 210 | Protein_3468 | hypothetical protein | - |
| DE22_RS17735 () | 3663361..3664484 | - | 1124 | Protein_3469 | ISAs1 family transposase | - |
| DE22_RS17740 () | 3664736..3665170 | - | 435 | WP_000628872.1 | hypothetical protein | - |
| DE22_RS17745 () | 3665160..3669659 | - | 4500 | WP_001519082.1 | RHS repeat-associated core domain-containing protein | - |
| DE22_RS17750 () | 3669690..3670061 | - | 372 | WP_232231148.1 | DcrB-related protein | - |
| DE22_RS17755 () | 3670152..3672371 | - | 2220 | WP_000011505.1 | Actin cross-linking toxin VgrG1 | VF |
| DE22_RS17760 () | 3672906..3673040 | - | 135 | WP_001518591.1 | hypothetical protein | - |
| DE22_RS17765 () | 3673403..3673744 | - | 342 | WP_000872892.1 | hypothetical protein | - |
| DE22_RS17770 () | 3673834..3674565 | - | 732 | WP_000040883.1 | hypothetical protein | - |
| DE22_RS17775 () | 3674615..3674716 | - | 102 | Protein_3477 | cytoplasmic protein | - |
| DE22_RS17780 () | 3674752..3675213 | - | 462 | WP_001529547.1 | hypothetical protein | - |
| DE22_RS17785 () | 3675198..3675668 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| DE22_RS17790 () | 3675711..3676478 | - | 768 | WP_001254120.1 | TagF domain-containing protein | - |
| DE22_RS17795 () | 3676478..3680347 | - | 3870 | WP_001168941.1 | hypothetical protein | VF |
| DE22_RS17800 () | 3680381..3680812 | - | 432 | WP_023166851.1 | putative Shiga-like toxin A subunit | - |
| DE22_RS17805 () | 3681014..3681787 | - | 774 | WP_000976554.1 | Rap1a/Tai family immunity protein | - |
| DE22_RS17810 () | 3681792..3683096 | - | 1305 | WP_000132479.1 | Peptidoglycan-associated lipoprotein | VF |
| DE22_RS17815 () | 3683093..3684436 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| DE22_RS17820 () | 3684440..3684976 | - | 537 | WP_001045936.1 | hypothetical protein | VF |
| DE22_RS17825 () | 3685043..3685528 | - | 486 | WP_000119443.1 | Protein hcp1 | VF |
| DE22_RS17830 () | 3685671..3686054 | - | 384 | WP_000379148.1 | type VI secretion system amidase immunity protein Tai4 | - |
| DE22_RS17835 () | 3686039..3686524 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| DE22_RS17840 () | 3686567..3686761 | - | 195 | Protein_3490 | type VI secretion system lipoprotein TssJ | - |
| DE22_RS17845 () | 3686828..3687313 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| DE22_RS17850 () | 3687567..3687899 | - | 333 | WP_077905251.1 | hypothetical protein | - |
| DE22_RS17855 () | 3688026..3688136 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| DE22_RS17860 () | 3688199..3689707 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| DE22_RS17865 () | 3689731..3690273 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| DE22_RS17870 () | 3690373..3693012 | - | 2640 | WP_000449789.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|