MGE detailed information
MGE type: Genomic_island MGE length: 56136 bp
Accession: NZ_CP123231 Location: 4378473..4434608 Organism: Escherichia coli strain 5132 Replicon: chromosome
Accession: NZ_CP123231 Location: 4378473..4434608 Organism: Escherichia coli strain 5132 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QET41_RS21360 (4373912) | 4373912..4374605 | + | 694 | Protein_4181 | IS1 family transposase | - |
| QET41_RS21365 (4375223) | 4375223..4375570 | + | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| QET41_RS21370 (4375640) | 4375640..4376796 | + | 1157 | WP_100183773.1 | IS3 family transposase | - |
| QET41_RS21375 (4376817) | 4376817..4377002 | + | 186 | Protein_4184 | transposase domain-containing protein | - |
| QET41_RS21380 (4377137) | 4377137..4378465 | + | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| QET41_RS21385 (4378473) | 4378473..4379048 | + | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| QET41_RS21390 (4379601) | 4379601..4380326 | - | 726 | WP_000020778.1 | TatD family hydrolase | - |
| QET41_RS21395 (4380323) | 4380323..4381627 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| QET41_RS21400 (4381624) | 4381624..4382376 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| QET41_RS21405 (4382376) | 4382376..4384160 | - | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| QET41_RS21410 (4384292) | 4384292..4385557 | - | 1266 | WP_240724715.1 | hypothetical protein | - |
| QET41_RS21415 (4385796) | 4385796..4386272 | - | 477 | Protein_4192 | VasL domain-containing protein | - |
| QET41_RS21420 (4386272) | 4386272..4386616 | - | 345 | Protein_4193 | POTRA domain-containing protein | - |
| QET41_RS21425 (4387296) | 4387296..4387487 | + | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| QET41_RS21430 (4387540) | 4387540..4387773 | - | 234 | WP_000124176.1 | hypothetical protein | - |
| QET41_RS21435 (4387869) | 4387869..4388368 | - | 500 | Protein_4196 | DNA-binding protein | - |
| QET41_RS21440 (4388719) | 4388719..4389837 | + | 1119 | WP_000135343.1 | NAD-dependent methanol dehydrogenase | VF |
| QET41_RS21445 (4389977) | 4389977..4390663 | + | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| QET41_RS21450 (4390718) | 4390718..4391476 | + | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| QET41_RS21455 (4391460) | 4391460..4392185 | + | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| QET41_RS21460 (4392197) | 4392197..4392466 | + | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| QET41_RS21465 (4392494) | 4392494..4392991 | + | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| QET41_RS21470 (4393020) | 4393020..4394216 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| QET41_RS21475 (4394501) | 4394501..4394782 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| QET41_RS21480 (4394804) | 4394804..4395589 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| QET41_RS21485 (4395650) | 4395650..4397167 | + | 1518 | WP_001773853.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| QET41_RS21490 (4397191) | 4397191..4397490 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| QET41_RS21495 (4397501) | 4397501..4398076 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| QET41_RS21500 (4398125) | 4398125..4400677 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| QET41_RS21505 (4400786) | 4400786..4401703 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| QET41_RS21510 (4401840) | 4401840..4402745 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| QET41_RS21515 (4403231) | 4403231..4403770 | + | 540 | WP_001332064.1 | maturase | - |
| QET41_RS21520 (4403798) | 4403798..4404319 | + | 522 | WP_000237741.1 | reverse transcriptase domain-containing protein | - |
| QET41_RS21525 (4404869) | 4404869..4406131 | + | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| QET41_RS21530 (4406148) | 4406148..4407203 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| QET41_RS21535 (4407332) | 4407332..4408483 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| QET41_RS21540 (4408528) | 4408528..4409073 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| QET41_RS21545 (4409430) | 4409430..4409774 | - | 345 | WP_001773854.1 | hypothetical protein | VF |
| QET41_RS21550 (4410025) | 4410025..4410417 | - | 393 | WP_224156610.1 | TetR family transcriptional regulator | - |
| QET41_RS21555 (4410517) | 4410517..4411662 | - | 1146 | Protein_4220 | Multidrug resistance protein MexB | VF |
| QET41_RS21560 (4411765) | 4411765..4412025 | + | 261 | Protein_4221 | IS3 family transposase IS2 | Transposase |
| QET41_RS21565 (4412017) | 4412017..4412079 | - | 63 | Protein_4222 | IS3 family transposase IS2 | Transposase |
| QET41_RS21570 (4412208) | 4412208..4412333 | - | 126 | WP_000831909.1 | hypothetical protein | - |
| QET41_RS21575 (4412330) | 4412330..4412563 | - | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| QET41_RS21580 (4412632) | 4412632..4413207 | - | 576 | WP_000991593.1 | hypothetical protein | - |
| QET41_RS21585 (4413554) | 4413554..4414285 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| QET41_RS21590 (4415738) | 4415738..4416961 | - | 1224 | WP_001773856.1 | hypothetical protein | - |
| QET41_RS21595 (4417062) | 4417062..4417946 | + | 885 | WP_001116801.1 | YfjP family GTPase | - |
| QET41_RS21600 (4418149) | 4418149..4418829 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QET41_RS21605 (4418977) | 4418977..4419654 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QET41_RS21610 (4419660) | 4419660..4419893 | + | 234 | WP_001278283.1 | DUF905 family protein | - |
| QET41_RS21615 (4419983) | 4419983..4420801 | + | 819 | WP_001773857.1 | DUF932 domain-containing protein | - |
| QET41_RS21620 (4420892) | 4420892..4421377 | + | 486 | WP_000214398.1 | antirestriction protein | - |
| QET41_RS21625 (4421393) | 4421393..4421869 | + | 477 | WP_001186786.1 | RadC family protein | - |
| QET41_RS21630 (4421932) | 4421932..4422153 | + | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| QET41_RS21635 (4422316) | 4422316..4422684 | + | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QET41_RS21640 (4422774) | 4422774..4423148 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| QET41_RS21645 (4423145) | 4423145..4423633 | + | 489 | WP_000777545.1 | DUF5983 family protein | - |
| QET41_RS21650 (4423645) | 4423645..4423842 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| QET41_RS21655 (4423939) | 4423939..4424508 | + | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| QET41_RS21660 (4425257) | 4425257..4426795 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QET41_RS21665 (4427161) | 4427161..4428495 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QET41_RS21670 (4428575) | 4428575..4430722 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QET41_RS21675 (4430781) | 4430781..4432238 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QET41_RS21680 (4432475) | 4432475..4433992 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QET41_RS21685 (4434111) | 4434111..4434284 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QET41_RS21690 (4434312) | 4434312..4434608 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QET41_RS21695 (4434837) | 4434837..4435109 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QET41_RS21700 (4435121) | 4435121..4435351 | - | 231 | WP_000373293.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QET41_RS21705 (4435532) | 4435532..4437163 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QET41_RS21710 (4437160) | 4437160..4437879 | + | 720 | WP_001540474.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|