MGE detailed information
MGE type: IScluster/Tn MGE length: 56511 bp
Accession: NZ_CP123218 Location: 3390..59900 Organism: Pseudomonas amygdali pv. aesculi strain 2203 Replicon: plasmid pPae2203P
Accession: NZ_CP123218 Location: 3390..59900 Organism: Pseudomonas amygdali pv. aesculi strain 2203 Replicon: plasmid pPae2203P
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP68_RS29190 | 1..1311 | + | 1311 | WP_060406849.1 | replication initiation protein | - |
| QEP68_RS29195 | 1536..1829 | + | 294 | WP_054999586.1 | HU family DNA-binding protein | - |
| QEP68_RS29200 | 2264..3196 | + | 933 | WP_020308919.1 | XopAH/AvrB family type III secretion system effector | - |
| QEP68_RS29205 | 3402..4547 | - | 1146 | Protein_3 | IS91 family transposase IS801 | Transposase |
| QEP68_RS29210 | 4528..4809 | - | 282 | WP_060406720.1 | hypothetical protein | - |
| QEP68_RS29215 | 5198..5989 | + | 792 | Protein_5 | IS110 family transposase ISPsy16 | Transposase |
| QEP68_RS29220 | 6074..7096 | + | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29225 | 7093..7902 | + | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29230 | 7952..8200 | + | 249 | Protein_8 | IS110 family transposase ISPsy16 | Transposase |
| QEP68_RS29235 | 8623..10095 | - | 1473 | WP_010208270.1 | XopAG/AvrGf1 family type III secretion system effector | - |
| QEP68_RS29240 | 10615..11592 | - | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP68_RS29245 | 11674..12003 | + | 330 | Protein_11 | MFS transporter | - |
| QEP68_RS29250 | 12162..13139 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP68_RS29255 | 13272..13889 | + | 618 | Protein_13 | MFS transporter | - |
| QEP68_RS29260 | 13947..14354 | + | 408 | WP_069704238.1 | hypothetical protein | - |
| QEP68_RS29265 | 14357..14686 | - | 330 | WP_010214760.1 | helix-turn-helix transcriptional regulator | - |
| QEP68_RS29270 | 14685..14921 | + | 237 | WP_010214759.1 | hypothetical protein | - |
| QEP68_RS29275 | 14938..15471 | + | 534 | WP_060406907.1 | transcription termination/antitermination NusG family protein | - |
| QEP68_RS29280 | 15560..15769 | + | 210 | WP_005622143.1 | hypothetical protein | - |
| QEP68_RS29285 | 15787..16059 | + | 273 | WP_010218278.1 | hypothetical protein | - |
| QEP68_RS29290 | 16175..16984 | - | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29295 | 16981..18003 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29300 | 18077..18451 | + | 375 | WP_234785910.1 | hypothetical protein | - |
| QEP68_RS29305 | 19321..20532 | - | 1212 | WP_234785911.1 | IS91 family transposase IS801 | Transposase |
| QEP68_RS29310 | 21202..22137 | + | 936 | WP_280125002.1 | protein-tyrosine phosphatase family protein | - |
| QEP68_RS29315 | 22349..22675 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| QEP68_RS29320 | 22672..22896 | - | 225 | WP_003319697.1 | antitoxin MazE family protein | Antitoxin Detail |
| QEP68_RS29325 | 23499..24197 | + | 699 | WP_005734862.1 | Protein virC1 | VF |
| QEP68_RS29330 | 24190..24513 | + | 324 | WP_005734861.1 | hypothetical protein | - |
| QEP68_RS29335 | 24864..26093 | - | 1230 | WP_081087346.1 | IS91 family transposase ISPsy3 | Transposase |
| QEP68_RS29345 | 27577..27900 | - | 324 | WP_280124743.1 | hypothetical protein | - |
| QEP68_RS29350 | 28315..28539 | + | 225 | WP_004661238.1 | carbon storage regulator | - |
| QEP68_RS29355 | 28554..30170 | + | 1617 | WP_234785936.1 | glycoside hydrolase family 28 protein | - |
| QEP68_RS29360 | 30322..30480 | - | 159 | Protein_34 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEP68_RS29365 | 30830..31864 | - | 1035 | WP_243580878.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP68_RS29370 | 32281..34311 | - | 2031 | WP_060406890.1 | IS66 family transposase ISPsy43 | VF |
| QEP68_RS29375 | 34817..35509 | + | 693 | Protein_37 | IS110 family transposase ISPsy16 | Transposase |
| QEP68_RS29380 | 35627..36604 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP68_RS29385 | 36965..37297 | - | 333 | WP_010215871.1 | hypothetical protein | - |
| QEP68_RS29390 | 37345..38214 | + | 870 | WP_005730255.1 | hypothetical protein | - |
| QEP68_RS29395 | 38264..38809 | - | 546 | WP_005730256.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEP68_RS29400 | 38931..39491 | + | 561 | Protein_42 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP68_RS29410 | 40807..43215 | + | 2409 | Protein_44 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP68_RS29415 | 43248..44532 | + | 1285 | Protein_45 | hypothetical protein | - |
| QEP68_RS29420 | 44658..45086 | + | 429 | WP_010208712.1 | GntR family transcriptional regulator | - |
| QEP68_RS29425 | 45569..45997 | + | 429 | WP_234785925.1 | hypothetical protein | - |
| QEP68_RS29430 | 46007..46816 | - | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29435 | 46813..47835 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP68_RS29440 | 48041..48319 | - | 279 | Protein_50 | type II toxin-antitoxin system YafQ family toxin | - |
| QEP68_RS29445 | 48306..48569 | - | 264 | WP_005730323.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| QEP68_RS29450 | 48774..49220 | + | 447 | WP_232289920.1 | type III effector | - |
| QEP68_RS29455 | 49543..50773 | + | 1231 | WP_280124519.1 | IS91 family transposase IS801 | Transposase |
| QEP68_RS29460 | 51493..52527 | - | 1035 | WP_280124518.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP68_RS29465 | 52792..53058 | - | 267 | WP_005730593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QEP68_RS29470 | 53042..53269 | - | 228 | WP_005730594.1 | hypothetical protein | Antitoxin Detail |
| QEP68_RS29475 | 53532..54455 | - | 924 | WP_060406699.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| QEP68_RS29480 | 54662..54901 | + | 240 | WP_010216588.1 | ribbon-helix-helix domain-containing protein | - |
| QEP68_RS29485 | 54901..55320 | + | 420 | WP_005734741.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| QEP68_RS29490 | 55324..58299 | + | 2976 | WP_005734742.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| QEP68_RS29495 | 58330..59043 | + | 714 | WP_060406700.1 | YecA family protein | - |
| QEP68_RS29500 | 59107..59268 | - | 162 | Protein_62 | peptidase C58 | - |
| QEP68_RS29505 | 59295..59900 | + | 606 | WP_243580966.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| QEP68_RS29510 | 60201..60473 | - | 273 | WP_005730703.1 | hypothetical protein | - |
| QEP68_RS29515 | 60461..63247 | - | 2787 | WP_010216612.1 | RHS repeat domain-containing protein | - |
| QEP68_RS29520 | 63274..64497 | - | 1224 | WP_080544817.1 | DUF6531 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|