MGE detailed information
MGE type: Conjugative plasmid MGE length: 136841 bp
Accession: NZ_CP123213 Location: 1..136841 Organism: Pseudomonas amygdali pv. aesculi strain 1804 Replicon: plasmid pPae1804ZI
Accession: NZ_CP123213 Location: 1..136841 Organism: Pseudomonas amygdali pv. aesculi strain 1804 Replicon: plasmid pPae1804ZI
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP69_RS28630 | 1..666 | + | 666 | WP_010206144.1 | Mobilization protein A | Relaxase |
| QEP69_RS28635 | 728..1189 | - | 462 | WP_005734737.1 | hypothetical protein | - |
| QEP69_RS28640 | 1329..1622 | - | 294 | WP_005730619.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QEP69_RS28645 | 1622..1807 | - | 186 | WP_003348562.1 | hypothetical protein | Antitoxin Detail |
| QEP69_RS28655 | 3314..3586 | - | 273 | WP_060406870.1 | hypothetical protein | - |
| QEP69_RS28660 | 3680..4315 | - | 636 | WP_060406871.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP69_RS28665 | 4816..5466 | + | 651 | WP_003344252.1 | ParA family protein | - |
| QEP69_RS28670 | 5547..5837 | + | 291 | WP_010217231.1 | hypothetical protein | - |
| QEP69_RS28675 | 5911..6054 | + | 144 | WP_155511877.1 | hypothetical protein | - |
| QEP69_RS28680 | 6340..7041 | + | 702 | WP_010217228.1 | FadR/GntR family transcriptional regulator | - |
| QEP69_RS28685 | 7118..8314 | + | 1197 | WP_010217226.1 | L-2-hydroxyglutarate oxidase | - |
| QEP69_RS28690 | 8355..9701 | + | 1347 | WP_044319867.1 | MFS transporter | - |
| QEP69_RS28695 | 9757..9942 | + | 186 | WP_004661844.1 | hypothetical protein | - |
| QEP69_RS28700 | 9959..10312 | - | 354 | WP_010217213.1 | helix-turn-helix transcriptional regulator | - |
| QEP69_RS28705 | 10559..11071 | + | 513 | WP_060406872.1 | transcription termination/antitermination NusG family protein | - |
| QEP69_RS28710 | 11160..11372 | + | 213 | WP_060406873.1 | hypothetical protein | - |
| QEP69_RS28715 | 11400..12107 | + | 708 | WP_060406874.1 | Type IV secretion system protein virB1 | VF |
| QEP69_RS28720 | 12104..12442 | + | 339 | WP_234785932.1 | conjugal transfer protein | - |
| QEP69_RS28725 | 12455..12943 | + | 489 | WP_060406875.1 | VirB3 family type IV secretion system protein | - |
| QEP69_RS28730 | 12846..15344 | + | 2499 | WP_236732849.1 | conjugal transfer protein | - |
| QEP69_RS28735 | 15341..16027 | + | 687 | WP_010217173.1 | P-type DNA transfer protein VirB5 | - |
| QEP69_RS28740 | 16060..16413 | + | 354 | WP_060406728.1 | hypothetical protein | - |
| QEP69_RS28745 | 16424..17356 | + | 933 | WP_060406729.1 | type IV secretion system protein | - |
| QEP69_RS28750 | 17430..17744 | + | 315 | WP_060409895.1 | hypothetical protein | - |
| QEP69_RS28755 | 17781..18569 | + | 789 | WP_060406730.1 | Type IV secretion system protein virB8 | VF |
| QEP69_RS28760 | 18559..19368 | + | 810 | WP_060409894.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QEP69_RS28765 | 19355..20746 | + | 1392 | WP_060406745.1 | Type IV secretion system protein virB10 | VF |
| QEP69_RS28770 | 20756..21811 | + | 1056 | WP_060406746.1 | Type IV secretion system protein VirB11 | VF |
| QEP69_RS28775 | 21825..22211 | + | 387 | WP_054098190.1 | hypothetical protein | - |
| QEP69_RS28780 | 22196..22561 | + | 366 | WP_004667995.1 | hypothetical protein | - |
| QEP69_RS28785 | 22608..22874 | + | 267 | WP_010217138.1 | hypothetical protein | - |
| QEP69_RS28790 | 22994..23227 | + | 234 | WP_010217137.1 | hypothetical protein | - |
| QEP69_RS28795 | 23227..23424 | + | 198 | Protein_33 | hypothetical protein | VF |
| QEP69_RS28800 | 23487..24494 | + | 1008 | WP_010217132.1 | hypothetical protein | - |
| QEP69_RS28805 | 24496..24789 | + | 294 | WP_010217130.1 | hypothetical protein | - |
| QEP69_RS28810 | 24911..25144 | + | 234 | WP_060406747.1 | hypothetical protein | - |
| QEP69_RS28815 | 25144..26805 | + | 1662 | WP_010217644.1 | Conjugal transfer protein TraG | VF |
| QEP69_RS28820 | 26847..27209 | + | 363 | WP_010217641.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QEP69_RS28825 | 27237..29402 | + | 2166 | WP_010217635.1 | type IA DNA topoisomerase | - |
| QEP69_RS28830 | 29429..29713 | + | 285 | WP_010217633.1 | hypothetical protein | - |
| QEP69_RS28835 | 29741..30346 | + | 606 | WP_010217631.1 | single-stranded DNA-binding protein | - |
| QEP69_RS28840 | 30387..30650 | + | 264 | WP_010217629.1 | hypothetical protein | - |
| QEP69_RS28845 | 30953..31672 | + | 720 | WP_010217628.1 | StbB family protein | - |
| QEP69_RS28850 | 31669..32241 | + | 573 | WP_010217627.1 | hypothetical protein | - |
| QEP69_RS28855 | 32256..32645 | - | 390 | WP_010217617.1 | hypothetical protein | - |
| QEP69_RS28860 | 33004..33729 | + | 726 | WP_010217615.1 | relaxosome component | - |
| QEP69_RS28865 | 33719..34417 | + | 699 | Protein_47 | hypothetical protein | Relaxase |
| QEP69_RS28870 | 34716..35135 | + | 420 | WP_010217604.1 | hypothetical protein | Relaxase |
| QEP69_RS28875 | 36302..36640 | - | 339 | Protein_49 | IS91 family transposase IS801 | Transposase |
| QEP69_RS28880 | 36688..37497 | - | 810 | WP_057412986.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28885 | 37494..38516 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28890 | 38603..38986 | - | 384 | Protein_52 | IS91 family transposase IS801 | Transposase |
| QEP69_RS28895 | 39398..39673 | + | 276 | WP_060409893.1 | hypothetical protein | - |
| QEP69_RS28900 | 39762..40625 | - | 864 | WP_234785920.1 | HNH endonuclease | - |
| QEP69_RS28905 | 40823..41452 | + | 630 | WP_004666923.1 | ParA family partition ATPase | - |
| QEP69_RS28910 | 41473..41691 | + | 219 | WP_004666922.1 | plasmid partition protein ParG | - |
| QEP69_RS28915 | 42021..42302 | + | 282 | Protein_57 | SOS response-associated peptidase family protein | - |
| QEP69_RS28920 | 42672..43124 | + | 453 | WP_019331432.1 | hypothetical protein | - |
| QEP69_RS28925 | 43218..43397 | + | 180 | WP_017685223.1 | hypothetical protein | - |
| QEP69_RS28935 | 44986..45201 | + | 216 | WP_081079976.1 | carbon storage regulator | - |
| QEP69_RS28940 | 45231..45644 | + | 414 | WP_060406755.1 | TraR/DksA family transcriptional regulator | - |
| QEP69_RS28945 | 45682..45903 | + | 222 | WP_060406754.1 | hypothetical protein | - |
| QEP69_RS28950 | 46229..46849 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP69_RS28955 | 47336..47668 | + | 333 | WP_010216246.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEP69_RS28960 | 47670..47954 | + | 285 | WP_010216244.1 | NadS family protein | - |
| QEP69_RS28965 | 48110..48550 | + | 441 | WP_010216242.1 | TrfB-related DNA-binding protein | - |
| QEP69_RS28970 | 48986..49363 | + | 378 | WP_060409849.1 | hypothetical protein | - |
| QEP69_RS28975 | 49410..50246 | + | 837 | WP_060409943.1 | DUF932 domain-containing protein | - |
| QEP69_RS28980 | 50314..50514 | + | 201 | WP_004666908.1 | hypothetical protein | - |
| QEP69_RS28985 | 50581..50859 | - | 279 | WP_004661031.1 | mobilization protein | - |
| QEP69_RS28990 | 51157..51501 | - | 345 | WP_004661028.1 | hypothetical protein | - |
| QEP69_RS28995 | 51761..52090 | + | 330 | WP_003344297.1 | plasmid mobilization protein MobA | - |
| QEP69_RS29000 | 52101..54056 | + | 1956 | WP_060409850.1 | Protein TraI | Relaxase |
| QEP69_RS29005 | 54351..55193 | - | 843 | WP_060406824.1 | Transcriptional activator protein LasR | VF |
| QEP69_RS29010 | 55250..55843 | - | 594 | WP_060406823.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| QEP69_RS29015 | 55840..57306 | - | 1467 | WP_060406822.1 | 2-amino-4-deoxychorismate synthase | VF |
| QEP69_RS29020 | 57935..59287 | + | 1353 | WP_060406821.1 | phenylacetate--CoA ligase family protein | - |
| QEP69_RS29025 | 59294..59839 | + | 546 | WP_046835423.1 | hypothetical protein | - |
| QEP69_RS29030 | 59841..60524 | + | 684 | WP_003319174.1 | iron-containing redox enzyme family protein | - |
| QEP69_RS29035 | 60528..61145 | + | 618 | WP_017699540.1 | flavodoxin family protein | - |
| QEP69_RS29040 | 61148..62056 | + | 909 | WP_046835404.1 | EamA family transporter | - |
| QEP69_RS29045 | 62043..62918 | + | 876 | WP_060406820.1 | alpha/beta fold hydrolase | - |
| QEP69_RS29050 | 63708..65657 | - | 1950 | WP_060406819.1 | putative signaling protein | VF |
| QEP69_RS29055 | 65825..66121 | + | 297 | Protein_85 | IS5 family transposase ISPsy2 | Transposase |
| QEP69_RS29060 | 66176..67275 | - | 1100 | Protein_86 | IS5 family transposase ISPsy19 | Transposase |
| QEP69_RS29065 | 67502..68203 | + | 702 | WP_032673373.1 | FadR/GntR family transcriptional regulator | - |
| QEP69_RS29070 | 68279..69475 | + | 1197 | WP_060406905.1 | L-2-hydroxyglutarate oxidase | - |
| QEP69_RS29075 | 69516..69824 | + | 309 | Protein_89 | MFS transporter | - |
| QEP69_RS29080 | 69925..70968 | + | 1044 | Protein_90 | MFS transporter | - |
| QEP69_RS29085 | 71027..71434 | + | 408 | WP_243580936.1 | hypothetical protein | - |
| QEP69_RS29090 | 71437..71766 | - | 330 | WP_010214760.1 | helix-turn-helix transcriptional regulator | - |
| QEP69_RS29095 | 71765..72001 | + | 237 | WP_010214759.1 | hypothetical protein | - |
| QEP69_RS29100 | 72018..72551 | + | 534 | WP_243580937.1 | transcription termination/antitermination NusG family protein | - |
| QEP69_RS29105 | 72640..72849 | + | 210 | WP_005622143.1 | hypothetical protein | - |
| QEP69_RS29110 | 73142..73633 | + | 492 | WP_060409926.1 | hypothetical protein | VF |
| QEP69_RS29115 | 73670..74143 | + | 474 | WP_060409861.1 | DotD/TraH family lipoprotein | - |
| QEP69_RS29120 | 74140..74940 | + | 801 | WP_060409925.1 | hypothetical protein | VF |
| QEP69_RS29125 | 74967..76127 | + | 1161 | WP_060409924.1 | Twitching mobility protein | VF |
| QEP69_RS29130 | 76327..76911 | + | 585 | WP_005769783.1 | hypothetical protein | - |
| QEP69_RS29135 | 76908..77459 | + | 552 | WP_060409899.1 | Phospholipase D | VF |
| QEP69_RS29140 | 77485..77730 | + | 246 | WP_060406884.1 | hypothetical protein | - |
| QEP69_RS29145 | 77759..78046 | + | 288 | WP_060409898.1 | IcmT/TraK family protein | - |
| QEP69_RS29150 | 78089..78490 | + | 402 | WP_060409923.1 | hypothetical protein | - |
| QEP69_RS29155 | 78523..79332 | - | 810 | WP_057412986.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS29160 | 79329..80351 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS29165 | 80558..84349 | + | 3792 | WP_060409955.1 | DUF5710 domain-containing protein | - |
| QEP69_RS29170 | 84375..84728 | + | 354 | WP_003344366.1 | traL protein | - |
| QEP69_RS29175 | 84725..85432 | + | 708 | WP_003344369.1 | DotI/IcmL family type IV secretion protein | - |
| QEP69_RS29180 | 85476..86534 | + | 1059 | WP_081079959.1 | hypothetical protein | VF |
| QEP69_RS29185 | 86540..87898 | + | 1359 | WP_060409953.1 | conjugal transfer protein TraO | - |
| QEP69_RS29190 | 87895..88605 | + | 711 | WP_060409952.1 | conjugal transfer protein TraP | - |
| QEP69_RS29195 | 88614..89156 | + | 543 | WP_060406800.1 | conjugal transfer protein TraQ | - |
| QEP69_RS29200 | 89232..89618 | + | 387 | WP_060409852.1 | hypothetical protein | VF |
| QEP69_RS29205 | 89699..90310 | + | 612 | WP_060409851.1 | hypothetical protein | - |
| QEP69_RS29210 | 90285..93341 | + | 3057 | WP_060409951.1 | conjugal transfer protein | - |
| QEP69_RS29215 | 93352..94566 | + | 1215 | WP_060409954.1 | conjugal transfer protein TraW | - |
| QEP69_RS29220 | 94556..95158 | + | 603 | WP_060406860.1 | conjugal transfer protein TraX | - |
| QEP69_RS29225 | 95187..97331 | + | 2145 | WP_060409910.1 | DotA/TraY family protein | - |
| QEP69_RS29230 | 97434..97679 | + | 246 | WP_003344389.1 | hypothetical protein | - |
| QEP69_RS29235 | 97676..98326 | + | 651 | WP_060409909.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QEP69_RS29240 | 98418..99620 | + | 1203 | WP_060409842.1 | hypothetical protein | - |
| QEP69_RS29245 | 99610..99987 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| QEP69_RS29250 | 99984..100184 | - | 201 | WP_060406773.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEP69_RS29255 | 100277..101362 | + | 1086 | WP_060409950.1 | thioredoxin fold domain-containing protein | - |
| QEP69_RS29260 | 101349..103637 | + | 2289 | WP_280124526.1 | F-type conjugative transfer protein TrbC | - |
| QEP69_RS29265 | 103683..104111 | + | 429 | WP_060409866.1 | GntR family transcriptional regulator | - |
| QEP69_RS29270 | 104182..104391 | + | 210 | Protein_128 | hypothetical protein | - |
| QEP69_RS29275 | 104793..106106 | + | 1314 | WP_060409915.1 | replication initiation protein | - |
| QEP69_RS29280 | 106332..106619 | + | 288 | WP_060409916.1 | HU family DNA-binding protein | - |
| QEP69_RS29285 | 107032..108450 | + | 1419 | Protein_131 | hypothetical protein | - |
| QEP69_RS29290 | 109132..109560 | + | 429 | WP_060406748.1 | GntR family transcriptional regulator | - |
| QEP69_RS29295 | 109914..110816 | + | 903 | WP_005730396.1 | hypothetical protein | - |
| QEP69_RS29300 | 110833..111045 | + | 213 | WP_060406749.1 | hypothetical protein | - |
| QEP69_RS29305 | 111443..112756 | + | 1314 | WP_060406750.1 | replication initiation protein | - |
| QEP69_RS29310 | 112940..113233 | + | 294 | WP_060406751.1 | HU family DNA-binding protein | - |
| QEP69_RS29315 | 113291..114513 | + | 1223 | WP_243580940.1 | IS3 family transposase IS51 | Transposase |
| QEP69_RS29320 | 114581..114781 | + | 201 | Protein_138 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QEP69_RS29325 | 114855..115682 | + | 828 | WP_010207108.1 | TauD/TfdA family dioxygenase | - |
| QEP69_RS29330 | 115700..116734 | + | 1035 | WP_005734275.1 | sulfotransferase | - |
| QEP69_RS29335 | 116775..117977 | + | 1203 | WP_005734276.1 | aspartate aminotransferase family protein | - |
| QEP69_RS29340 | 118014..118670 | + | 657 | WP_032701869.1 | 2OG-Fe(II) oxygenase family protein | - |
| QEP69_RS29345 | 118670..119248 | + | 579 | WP_005734277.1 | AAA family ATPase | - |
| QEP69_RS29350 | 119528..119791 | + | 264 | WP_060409930.1 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| QEP69_RS29355 | 119822..120247 | + | 426 | Protein_145 | IS91 family transposase ISPsy3 | Transposase |
| QEP69_RS29360 | 120308..121021 | - | 714 | WP_060406700.1 | YecA family protein | - |
| QEP69_RS29365 | 121052..124027 | - | 2976 | WP_005734742.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| QEP69_RS29370 | 124031..124450 | - | 420 | WP_005734741.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| QEP69_RS29375 | 124450..124689 | - | 240 | WP_010216588.1 | ribbon-helix-helix domain-containing protein | - |
| QEP69_RS29380 | 124896..125819 | + | 924 | WP_060406699.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| QEP69_RS29385 | 126324..133718 | - | 7395 | WP_243580941.1 | XopAD/skwp family type III secretion system effector | - |
| QEP69_RS29390 | 133882..134822 | - | 941 | Protein_152 | IS3 family transposase IS51 | Transposase |
| QEP69_RS29395 | 134835..135068 | - | 234 | WP_060409948.1 | hypothetical protein | - |
| QEP69_RS29400 | 135340..135909 | + | 570 | WP_234785935.1 | recombinase family protein | - |
| QEP69_RS29405 | 136144..136251 | + | 108 | Protein_155 | resolvase | - |
| QEP69_RS29410 | 136346..136618 | + | 273 | WP_044322702.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|