MGE detailed information
MGE type: IScluster/Tn MGE length: 52476 bp
Accession: NZ_CP123211 Location: 17454..69929 Organism: Pseudomonas amygdali pv. aesculi strain 1804 Replicon: plasmid pPae1804P
Accession: NZ_CP123211 Location: 17454..69929 Organism: Pseudomonas amygdali pv. aesculi strain 1804 Replicon: plasmid pPae1804P
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP69_RS28015 | 12857..14080 | + | 1224 | WP_080544817.1 | DUF6531 domain-containing protein | - |
| QEP69_RS28020 | 14107..16893 | + | 2787 | WP_010216612.1 | RHS repeat domain-containing protein | - |
| QEP69_RS28025 | 17454..18059 | - | 606 | WP_243580966.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| QEP69_RS28030 | 18086..18247 | + | 162 | Protein_18 | peptidase C58 | - |
| QEP69_RS28035 | 18311..19024 | - | 714 | WP_060406700.1 | YecA family protein | - |
| QEP69_RS28040 | 19055..22031 | - | 2977 | Protein_20 | Tn3 family transposase TnpA_ISThsp9 | Transposase |
| QEP69_RS28045 | 22035..22454 | - | 420 | WP_005734741.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| QEP69_RS28050 | 22454..22693 | - | 240 | WP_010216588.1 | ribbon-helix-helix domain-containing protein | - |
| QEP69_RS28055 | 22900..23823 | + | 924 | WP_060406699.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| QEP69_RS28060 | 24086..24313 | + | 228 | WP_005730594.1 | hypothetical protein | Antitoxin Detail |
| QEP69_RS28065 | 24297..24563 | + | 267 | WP_005730593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QEP69_RS28070 | 24828..25862 | + | 1035 | WP_280124518.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP69_RS28080 | 28135..28581 | - | 447 | WP_232289920.1 | type III effector | - |
| QEP69_RS28085 | 28786..29049 | + | 264 | WP_005730323.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| QEP69_RS28090 | 29036..29314 | + | 279 | Protein_30 | type II toxin-antitoxin system YafQ family toxin | - |
| QEP69_RS28095 | 29520..30542 | + | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28100 | 30539..31348 | + | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28105 | 31358..31786 | - | 429 | WP_234785925.1 | hypothetical protein | - |
| QEP69_RS28110 | 32269..32697 | - | 429 | WP_010208712.1 | GntR family transcriptional regulator | - |
| QEP69_RS28115 | 32823..34107 | - | 1285 | Protein_35 | hypothetical protein | - |
| QEP69_RS28120 | 34140..36548 | - | 2409 | Protein_36 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP69_RS28125 | 36596..37818 | + | 1223 | WP_243580927.1 | IS3 family transposase IS51 | Transposase |
| QEP69_RS28130 | 37864..38424 | - | 561 | Protein_38 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP69_RS28135 | 38546..39091 | + | 546 | WP_005730256.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEP69_RS28140 | 39141..40010 | - | 870 | WP_005730255.1 | hypothetical protein | - |
| QEP69_RS28145 | 40058..40378 | + | 321 | WP_280124521.1 | hypothetical protein | - |
| QEP69_RS28150 | 40610..41392 | - | 783 | Protein_42 | IS5 family transposase IS52 | Transposase |
| QEP69_RS28155 | 41510..42202 | - | 693 | Protein_43 | IS110 family transposase ISPsy16 | Transposase |
| QEP69_RS28160 | 42708..44738 | + | 2031 | WP_060406890.1 | IS66 family transposase ISPsy43 | VF |
| QEP69_RS28165 | 45155..46189 | + | 1035 | WP_243580878.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP69_RS28170 | 46539..46697 | + | 159 | Protein_46 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEP69_RS28175 | 46849..48464 | - | 1616 | Protein_47 | glycoside hydrolase family 28 protein | - |
| QEP69_RS28180 | 48479..48703 | - | 225 | WP_004661238.1 | carbon storage regulator | - |
| QEP69_RS28185 | 49160..49441 | + | 282 | WP_243580957.1 | hypothetical protein | - |
| QEP69_RS28190 | 49422..50655 | + | 1234 | WP_280124520.1 | IS91 family transposase IS801 | Transposase |
| QEP69_RS28195 | 50925..52154 | + | 1230 | WP_243580959.1 | IS91 family transposase ISPsy3 | Transposase |
| QEP69_RS28200 | 52505..52828 | - | 324 | WP_005734861.1 | hypothetical protein | - |
| QEP69_RS28205 | 52821..53519 | - | 699 | WP_005734862.1 | Protein virC1 | VF |
| QEP69_RS28210 | 54122..54346 | + | 225 | WP_003319697.1 | antitoxin MazE family protein | Antitoxin Detail |
| QEP69_RS28215 | 54343..54669 | + | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| QEP69_RS28220 | 54881..56281 | - | 1401 | WP_010217001.1 | protein-tyrosine phosphatase family protein | - |
| QEP69_RS28225 | 56486..57697 | + | 1212 | WP_234785911.1 | IS91 family transposase IS801 | Transposase |
| QEP69_RS28230 | 58567..58941 | - | 375 | WP_234785910.1 | hypothetical protein | - |
| QEP69_RS28235 | 59015..60038 | + | 1024 | Protein_59 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28240 | 60035..60844 | + | 810 | WP_280124492.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP69_RS28245 | 61250..61459 | - | 210 | WP_005622143.1 | hypothetical protein | - |
| QEP69_RS28250 | 61548..62081 | - | 534 | WP_060406907.1 | transcription termination/antitermination NusG family protein | - |
| QEP69_RS28255 | 62098..62334 | - | 237 | WP_010214759.1 | hypothetical protein | - |
| QEP69_RS28260 | 62333..62662 | + | 330 | WP_010214760.1 | helix-turn-helix transcriptional regulator | - |
| QEP69_RS28265 | 62665..63072 | - | 408 | WP_069704238.1 | hypothetical protein | - |
| QEP69_RS28270 | 63130..63747 | - | 618 | Protein_66 | MFS transporter | - |
| QEP69_RS28275 | 63880..64860 | - | 981 | WP_280124750.1 | IS5 family transposase IS52 | Transposase |
| QEP69_RS28280 | 65019..65348 | - | 330 | Protein_68 | MFS transporter | - |
| QEP69_RS28285 | 65430..66407 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP69_RS28290 | 66927..68399 | + | 1473 | WP_010208270.1 | XopAG/AvrGf1 family type III secretion system effector | - |
| QEP69_RS28295 | 68822..69070 | - | 249 | Protein_71 | IS110 family transposase ISPsy16 | Transposase |
| QEP69_RS28300 | 69120..69929 | - | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|