MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71577 bp
Accession: NZ_CP123207 Location: 1..71577 Organism: Pseudomonas amygdali pv. aesculi strain 6617 Replicon: plasmid pPae6617P
Accession: NZ_CP123207 Location: 1..71577 Organism: Pseudomonas amygdali pv. aesculi strain 6617 Replicon: plasmid pPae6617P
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEP71_RS28950 | 1..1311 | + | 1311 | WP_060406849.1 | replication initiation protein | - |
| QEP71_RS28955 | 1536..1829 | + | 294 | WP_054999586.1 | HU family DNA-binding protein | - |
| QEP71_RS28960 | 2264..3196 | + | 933 | WP_020308919.1 | XopAH/AvrB family type III secretion system effector | - |
| QEP71_RS28965 | 3402..4547 | - | 1146 | Protein_3 | IS91 family transposase IS801 | Transposase |
| QEP71_RS28970 | 4528..4809 | - | 282 | WP_060406720.1 | hypothetical protein | - |
| QEP71_RS28975 | 5198..5989 | + | 792 | Protein_5 | IS110 family transposase ISPsy16 | Transposase |
| QEP71_RS28980 | 6074..7096 | + | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28985 | 7093..7902 | + | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS28990 | 7952..8200 | + | 249 | Protein_8 | IS110 family transposase ISPsy16 | Transposase |
| QEP71_RS28995 | 8623..10095 | - | 1473 | WP_010208270.1 | XopAG/AvrGf1 family type III secretion system effector | - |
| QEP71_RS29000 | 10615..11592 | - | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP71_RS29005 | 11647..12018 | + | 372 | Protein_11 | MFS transporter | - |
| QEP71_RS29010 | 12162..13139 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP71_RS29015 | 13272..13889 | + | 618 | Protein_13 | MFS transporter | - |
| QEP71_RS29020 | 13947..14354 | + | 408 | WP_069704238.1 | hypothetical protein | - |
| QEP71_RS29025 | 14685..15665 | - | 981 | WP_057403839.1 | IS5 family transposase ISPsy2 | Transposase |
| QEP71_RS29030 | 15708..15884 | - | 177 | WP_280124742.1 | helix-turn-helix transcriptional regulator | - |
| QEP71_RS29035 | 15805..16119 | + | 315 | WP_280124744.1 | hypothetical protein | - |
| QEP71_RS29040 | 16136..16669 | + | 534 | WP_060406907.1 | transcription termination/antitermination NusG family protein | - |
| QEP71_RS29045 | 16758..16967 | + | 210 | WP_005622143.1 | hypothetical protein | - |
| QEP71_RS29050 | 17373..18182 | - | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS29055 | 18179..19201 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS29060 | 19275..19649 | + | 375 | WP_234785910.1 | hypothetical protein | - |
| QEP71_RS29065 | 20519..21730 | - | 1212 | WP_234785911.1 | IS91 family transposase IS801 | Transposase |
| QEP71_RS29070 | 21935..23335 | + | 1401 | WP_010217001.1 | protein-tyrosine phosphatase family protein | - |
| QEP71_RS29075 | 23547..23873 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| QEP71_RS29080 | 23870..24094 | - | 225 | WP_003319697.1 | antitoxin MazE family protein | Antitoxin Detail |
| QEP71_RS29085 | 24697..25395 | + | 699 | WP_005734862.1 | Protein virC1 | VF |
| QEP71_RS29090 | 25388..25711 | + | 324 | WP_005734861.1 | hypothetical protein | - |
| QEP71_RS29095 | 26062..27291 | - | 1230 | WP_243580959.1 | IS91 family transposase ISPsy3 | Transposase |
| QEP71_RS29105 | 28775..29098 | - | 324 | WP_280124743.1 | hypothetical protein | - |
| QEP71_RS29110 | 29513..29737 | + | 225 | WP_004661238.1 | carbon storage regulator | - |
| QEP71_RS29115 | 29752..31368 | + | 1617 | WP_234785936.1 | glycoside hydrolase family 28 protein | - |
| QEP71_RS29120 | 31520..31678 | - | 159 | Protein_34 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEP71_RS29125 | 32028..33062 | - | 1035 | WP_243580878.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP71_RS29130 | 33479..35509 | - | 2031 | WP_060406890.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| QEP71_RS29135 | 36015..36707 | + | 693 | Protein_37 | IS110 family transposase ISPsy16 | Transposase |
| QEP71_RS29140 | 36825..37802 | + | 978 | WP_032701292.1 | IS5 family transposase IS52 | Transposase |
| QEP71_RS29145 | 38163..38495 | - | 333 | WP_010215871.1 | hypothetical protein | - |
| QEP71_RS29150 | 38543..39412 | + | 870 | WP_005730255.1 | hypothetical protein | - |
| QEP71_RS29155 | 39462..40007 | - | 546 | WP_005730256.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEP71_RS29160 | 40129..40689 | + | 561 | Protein_42 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP71_RS29170 | 42005..44413 | + | 2409 | Protein_44 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QEP71_RS29175 | 44446..45730 | + | 1285 | Protein_45 | hypothetical protein | - |
| QEP71_RS29180 | 45856..46284 | + | 429 | WP_010208712.1 | GntR family transcriptional regulator | - |
| QEP71_RS29185 | 46767..47195 | + | 429 | WP_234785925.1 | hypothetical protein | - |
| QEP71_RS29190 | 47205..48014 | - | 810 | WP_243580873.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS29195 | 48011..49033 | - | 1023 | WP_005734931.1 | IS21 family transposase ISPsy4 | Transposase |
| QEP71_RS29200 | 49239..49517 | - | 279 | Protein_50 | type II toxin-antitoxin system YafQ family toxin | - |
| QEP71_RS29205 | 49504..49767 | - | 264 | WP_005730323.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| QEP71_RS29210 | 49972..50418 | + | 447 | WP_232289920.1 | type III effector | - |
| QEP71_RS29215 | 50741..51971 | + | 1231 | WP_280124519.1 | IS91 family transposase IS801 | Transposase |
| QEP71_RS29220 | 52691..53725 | - | 1035 | WP_280124518.1 | IS110 family transposase ISPsy16 | Transposase |
| QEP71_RS29225 | 53990..54256 | - | 267 | WP_005730593.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QEP71_RS29230 | 54240..54467 | - | 228 | WP_005730594.1 | hypothetical protein | Antitoxin Detail |
| QEP71_RS29235 | 54730..55653 | - | 924 | WP_060406699.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| QEP71_RS29240 | 55860..56099 | + | 240 | WP_010216588.1 | ribbon-helix-helix domain-containing protein | - |
| QEP71_RS29245 | 56099..56518 | + | 420 | WP_005734741.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| QEP71_RS29250 | 56522..59497 | + | 2976 | WP_005734742.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| QEP71_RS29255 | 59528..60241 | + | 714 | WP_060406700.1 | YecA family protein | - |
| QEP71_RS29260 | 60305..60466 | - | 162 | Protein_62 | peptidase C58 | - |
| QEP71_RS29265 | 60493..61098 | + | 606 | WP_243580966.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| QEP71_RS29270 | 61399..61671 | - | 273 | WP_005730703.1 | hypothetical protein | - |
| QEP71_RS29275 | 61659..64445 | - | 2787 | WP_010216612.1 | RHS repeat domain-containing protein | - |
| QEP71_RS29280 | 64472..65695 | - | 1224 | WP_080544817.1 | DUF6531 domain-containing protein | - |
| QEP71_RS29285 | 66676..66957 | + | 282 | Protein_67 | nucleotide-binding protein | - |
| QEP71_RS29290 | 67377..67907 | + | 531 | Protein_68 | type IV secretory system conjugative DNA transfer family protein | - |
| QEP71_RS29295 | 67935..68357 | + | 423 | WP_005734759.1 | hypothetical protein | - |
| QEP71_RS29300 | 68378..68941 | + | 564 | WP_010206573.1 | hypothetical protein | - |
| QEP71_RS29305 | 69129..69221 | + | 93 | Protein_71 | GntR family transcriptional regulator | - |
| QEP71_RS29310 | 69272..70494 | + | 1223 | WP_134930621.1 | IS3 family transposase IS51 | Transposase |
| QEP71_RS29315 | 70535..70873 | + | 339 | Protein_73 | GntR family transcriptional regulator | - |
| QEP71_RS29320 | 70953..71180 | + | 228 | WP_057433679.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|