MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 100602 bp
Accession: NZ_CP123025 Location: 1..100602 Organism: Escherichia coli strain 20-16 Replicon: plasmid p20-16P1
Accession: NZ_CP123025 Location: 1..100602 Organism: Escherichia coli strain 20-16 Replicon: plasmid p20-16P1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QEN53_RS23450 (1) | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QEN53_RS23455 (1263) | 1263..2003 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QEN53_RS23460 (2124) | 2124..2306 | - | 183 | WP_042065278.1 | hypothetical protein | - |
| QEN53_RS23465 (2373) | 2373..2662 | - | 290 | Protein_3 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QEN53_RS23470 (2649) | 2649..2917 | - | 269 | Protein_4 | type II toxin-antitoxin system ParD family antitoxin | - |
| QEN53_RS23475 (3449) | 3449..4321 | + | 873 | WP_104989445.1 | hypothetical protein | - |
| QEN53_RS23480 (4355) | 4355..5052 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| QEN53_RS23485 (5068) | 5068..5187 | + | 120 | Protein_7 | transcriptional regulator | - |
| QEN53_RS23490 (5165) | 5165..5788 | - | 624 | WP_000088605.1 | hypothetical protein | VF |
| QEN53_RS23495 (5870) | 5870..7075 | + | 1206 | WP_001089068.1 | Multidrug resistance protein MdtG | ARG |
| QEN53_RS23500 (7188) | 7188..7781 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QEN53_RS23505 (7915) | 7915..8619 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23510 (8673) | 8673..9038 | - | 366 | Protein_12 | chromate transporter | - |
| QEN53_RS23515 (9194) | 9194..9397 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QEN53_RS23520 (9525) | 9525..10364 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| QEN53_RS23525 (10358) | 10358..10705 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| QEN53_RS23530 (10822) | 10822..11660 | - | 839 | Protein_16 | hypothetical protein | ARG |
| QEN53_RS23535 (11666) | 11666..11956 | - | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QEN53_RS23540 (12068) | 12068..12565 | - | 498 | WP_001083725.1 | hypothetical protein | ARG |
| QEN53_RS23545 (12710) | 12710..13576 | + | 867 | Protein_19 | class 1 integron integrase IntI1 | - |
| QEN53_RS23550 (13631) | 13631..14335 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23555 (14500) | 14500..14793 | + | 294 | Protein_21 | IS30 family transposase ISAba125 | Transposase |
| QEN53_RS23560 (14894) | 14894..15706 | + | 813 | WP_023408309.1 | hypothetical protein | ARG |
| QEN53_RS23565 (15710) | 15710..16075 | + | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| QEN53_RS23570 (16080) | 16080..16718 | + | 639 | WP_004201168.1 | phosphoribosylanthranilate isomerase | - |
| QEN53_RS23575 (16729) | 16729..17286 | - | 558 | Protein_25 | twin-arginine translocation (TAT) pathway signal sequence domain protein | - |
| QEN53_RS23580 (17386) | 17386..17760 | - | 375 | Protein_26 | protein-disulfide reductase DsbD family protein | - |
| QEN53_RS23585 (18073) | 18073..19614 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QEN53_RS23590 (20019) | 20019..20858 | - | 840 | WP_000259031.1 | hypothetical protein | ARG |
| QEN53_RS23595 (20852) | 20852..21199 | - | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| QEN53_RS23600 (21405) | 21405..22193 | - | 789 | WP_000503573.1 | hypothetical protein | ARG |
| QEN53_RS23605 (22324) | 22324..22797 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| QEN53_RS23610 (22955) | 22955..23968 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| QEN53_RS23615 (24171) | 24171..24479 | + | 309 | Protein_33 | EAL domain-containing protein | - |
| QEN53_RS23620 (24370) | 24370..25074 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23625 (25134) | 25134..25214 | + | 81 | Protein_35 | hypothetical protein | - |
| QEN53_RS23630 (25265) | 25265..26392 | + | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| QEN53_RS23635 (26429) | 26429..27133 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23640 (27255) | 27255..28169 | + | 915 | WP_023063803.1 | hypothetical protein | ARG |
| QEN53_RS23645 (28166) | 28166..29404 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QEN53_RS23650 (29404) | 29404..29988 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QEN53_RS23655 (30481) | 30481..31245 | - | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| QEN53_RS23660 (31385) | 31385..32089 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23665 (32150) | 32150..32986 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QEN53_RS23670 (32986) | 32986..33789 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| QEN53_RS23675 (33850) | 33850..34665 | - | 816 | WP_001043265.1 | hypothetical protein | ARG |
| QEN53_RS23680 (34973) | 34973..35824 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| QEN53_RS23685 (35811) | 35811..36530 | - | 720 | Protein_47 | helicase RepA family protein | - |
| QEN53_RS23690 (36580) | 36580..37284 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23695 (37469) | 37469..38110 | - | 642 | WP_000134999.1 | MBL fold metallo-hydrolase | - |
| QEN53_RS23700 (38350) | 38350..38670 | - | 321 | Protein_50 | IS1380 family transposase ISEcp1 | Transposase |
| QEN53_RS23705 (38683) | 38683..39243 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| QEN53_RS23710 (39246) | 39246..41717 | + | 2472 | Protein_52 | Tn3-like element TnAs3 family transposase | - |
| QEN53_RS23715 (41864) | 41864..42724 | - | 861 | WP_000027057.1 | hypothetical protein | ARG |
| QEN53_RS23720 (42907) | 42907..43245 | - | 339 | Protein_54 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN53_RS23725 (43309) | 43309..44013 | + | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QEN53_RS23730 (44068) | 44068..44139 | + | 72 | Protein_56 | hypothetical protein | - |
| QEN53_RS23735 (44395) | 44395..45270 | + | 876 | WP_000239590.1 | hypothetical protein | ARG |
| QEN53_RS23740 (45317) | 45317..45610 | - | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QEN53_RS23745 (45675) | 45675..47894 | + | 2220 | Protein_59 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QEN53_RS23750 (47971) | 47971..48675 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23755 (48729) | 48729..49169 | - | 441 | Protein_61 | CatB-related O-acetyltransferase | - |
| QEN53_RS23760 (49307) | 49307..50137 | - | 831 | WP_001334766.1 | hypothetical protein | ARG |
| QEN53_RS23765 (50268) | 50268..50822 | - | 555 | WP_063840321.1 | hypothetical protein | ARG |
| QEN53_RS23770 (50966) | 50966..51670 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QEN53_RS23775 (51742) | 51742..54078 | + | 2337 | Protein_65 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| QEN53_RS23780 (54215) | 54215..54616 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QEN53_RS23785 (54549) | 54549..54806 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QEN53_RS23790 (54899) | 54899..55552 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QEN53_RS23795 (56492) | 56492..57349 | - | 858 | WP_000130640.1 | incFII family plasmid replication initiator RepA | - |
| QEN53_RS23800 (57342) | 57342..57416 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QEN53_RS23805 (57778) | 57778..59319 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QEN53_RS23810 (59334) | 59334..60080 | + | 747 | WP_053906593.1 | IS21 family transposase ISEc12 | Transposase |
| QEN53_RS23815 (60240) | 60240..60494 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QEN53_RS23820 (60791) | 60791..60925 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (60970) | 60970..61030 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60970) | 60970..61030 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60970) | 60970..61030 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (60970) | 60970..61030 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QEN53_RS23825 (60997) | 60997..61283 | - | 287 | Protein_75 | DUF2726 domain-containing protein | - |
| QEN53_RS23830 (61796) | 61796..62008 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QEN53_RS23835 (62139) | 62139..62699 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QEN53_RS23840 (62754) | 62754..63500 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| QEN53_RS23845 (63520) | 63520..65913 | - | 2394 | Protein_79 | ATP-dependent RecD-like DNA helicase | Relaxase |
| QEN53_RS23850 (65907) | 65907..66965 | - | 1059 | Protein_80 | DUF3560 domain-containing protein | - |
| QEN53_RS23855 (67017) | 67017..67247 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QEN53_RS23860 (68282) | 68282..68473 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QEN53_RS23865 (68470) | 68470..68891 | - | 422 | Protein_83 | DUF1380 family protein | - |
| QEN53_RS23870 (68938) | 68938..69363 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QEN53_RS23875 (69780) | 69780..70556 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QEN53_RS23880 (70607) | 70607..71125 | - | 519 | WP_123325260.1 | DUF1380 family protein | - |
| QEN53_RS23885 (71055) | 71055..71276 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QEN53_RS23890 (71277) | 71277..71960 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QEN53_RS23895 (72037) | 72037..72348 | - | 312 | WP_011254640.1 | hypothetical protein | - |
| QEN53_RS23900 (72345) | 72345..73247 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| QEN53_RS23905 (74114) | 74114..75085 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QEN53_RS23910 (75085) | 75085..76251 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| QEN53_RS23915 (76839) | 76839..77594 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QEN53_RS23920 (78368) | 78368..79174 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QEN53_RS23925 (79175) | 79175..79480 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QEN53_RS23930 (79482) | 79482..79700 | - | 219 | WP_023909027.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QEN53_RS23935 (80334) | 80334..80531 | + | 198 | WP_000215657.1 | hypothetical protein | - |
| QEN53_RS23940 (80528) | 80528..80812 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| QEN53_RS23945 (80832) | 80832..81965 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| QEN53_RS23950 (82228) | 82228..85347 | - | 3120 | WP_023909028.1 | hypothetical protein | - |
| QEN53_RS23955 (85654) | 85654..85884 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QEN53_RS23960 (85881) | 85881..86297 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QEN53_RS23965 (86459) | 86459..88597 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| QEN53_RS23970 (89062) | 89062..90057 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| QEN53_RS23975 (90100) | 90100..90993 | + | 894 | WP_001553853.1 | S-4TM family putative pore-forming effector | - |
| QEN53_RS23985 (92041) | 92041..95157 | - | 3117 | WP_031311986.1 | HsdR family type I site-specific deoxyribonuclease | - |
| QEN53_RS23990 (95279) | 95279..96562 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| QEN53_RS23995 (96559) | 96559..98115 | - | 1557 | WP_001553856.1 | type I restriction-modification system subunit M | - |
| QEN53_RS24000 (98298) | 98298..98519 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QEN53_RS24005 (98519) | 98519..98899 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| QEN53_RS24010 (98904) | 98904..99083 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| QEN53_RS24015 (99111) | 99111..99389 | + | 279 | Protein_113 | pdcB | - |
| QEN53_RS24020 (99394) | 99394..99807 | + | 414 | Protein_114 | IS3 family transposase ISLad1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|