MGE detailed information
MGE type: Conjugative plasmid MGE length: 123715 bp
Accession: NZ_CP122884 Location: 1..123715 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed4
Accession: NZ_CP122884 Location: 1..123715 Organism: Escherichia coli strain ETEC1716 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX09_RS26445 (1) | 1..1173 | + | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| QDX09_RS26450 (1173) | 1173..1565 | + | 393 | Protein_1 | IS21 family transposase IS21 | Transposase |
| QDX09_RS26455 (1614) | 1614..2959 | + | 1346 | WP_103758504.1 | IS3 family transposase ISEcB1 | Transposase |
| QDX09_RS26460 (3149) | 3149..3367 | - | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| QDX09_RS26465 (3875) | 3875..4024 | + | 150 | Protein_4 | IS3 family transposase ISKpn37 | Transposase |
| QDX09_RS26470 (4102) | 4102..4560 | + | 459 | Protein_5 | transposase | - |
| QDX09_RS26475 (4595) | 4595..4960 | + | 366 | WP_000124135.1 | hypothetical protein | - |
| QDX09_RS26480 (4960) | 4960..6147 | + | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| QDX09_RS26485 (6335) | 6335..6585 | + | 251 | Protein_8 | hypothetical protein | - |
| QDX09_RS26490 (6638) | 6638..7120 | - | 483 | WP_042634449.1 | ATP-binding protein | - |
| QDX09_RS26500 (8160) | 8160..8375 | + | 216 | WP_015056453.1 | heat-stable enterotoxin ST-II | - |
| QDX09_RS26505 (8763) | 8763..9723 | + | 961 | Protein_12 | IS3 family transposase | - |
| QDX09_RS26510 (9728) | 9728..10057 | + | 330 | Protein_13 | oxidoreductase | - |
| QDX09_RS26515 (10092) | 10092..10772 | - | 681 | Protein_14 | IS66 family transposase ISCro1 | Transposase |
| QDX09_RS26520 (10861) | 10861..11262 | + | 402 | WP_000124097.1 | hypothetical protein | - |
| QDX09_RS26525 (11225) | 11225..12412 | + | 1188 | WP_116794643.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26530 (12689) | 12689..13054 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDX09_RS26535 (13054) | 13054..13905 | + | 852 | Protein_18 | IS91 family transposase ISEc37 | Transposase |
| QDX09_RS26540 (13983) | 13983..14348 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS26545 (14348) | 14348..15535 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26550 (15884) | 15884..16720 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| QDX09_RS26555 (17954) | 17954..18205 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QDX09_RS26560 (18195) | 18195..18476 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX09_RS26565 (18859) | 18859..20046 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26570 (20046) | 20046..20411 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS26575 (20493) | 20493..21905 | + | 1413 | Protein_26 | DNA topoisomerase | - |
| QDX09_RS26580 (22044) | 22044..22307 | + | 264 | WP_000063165.1 | hypothetical protein | - |
| QDX09_RS26585 (22479) | 22479..22901 | + | 423 | WP_001398192.1 | hypothetical protein | - |
| QDX09_RS26590 (23354) | 23354..23449 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| QDX09_RS26595 (24239) | 24239..24712 | + | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QDX09_RS26600 (25135) | 25135..25500 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS26605 (25500) | 25500..26687 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26610 (26964) | 26964..27329 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDX09_RS26615 (27329) | 27329..28516 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDX09_RS26620 (29509) | 29509..30206 | + | 698 | WP_236281370.1 | IS1 family transposase IS1X2 | Transposase |
| QDX09_RS26625 (30416) | 30416..31644 | + | 1229 | Protein_36 | IS3 family transposase | - |
| QDX09_RS26630 (32127) | 32127..32639 | + | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| QDX09_RS26635 (32651) | 32651..35725 | + | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| QDX09_RS26640 (35797) | 35797..37919 | + | 2123 | Protein_39 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QDX09_RS26645 (37938) | 37938..39374 | + | 1437 | WP_000860467.1 | Hemolysin secretion protein D, plasmid | VF |
| QDX09_RS26650 (39452) | 39452..39793 | + | 342 | Protein_41 | IS3 family transposase | - |
| QDX09_RS26655 (40384) | 40384..40944 | + | 561 | Protein_42 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26660 (41164) | 41164..41670 | + | 507 | WP_000939423.1 | thiol peroxidase | - |
| QDX09_RS26665 (41890) | 41890..42087 | - | 198 | WP_143366484.1 | hypothetical protein | - |
| QDX09_RS26670 (42626) | 42626..43441 | + | 816 | WP_064226678.1 | HTH-type transcriptional activator RhaR | VF |
| QDX09_RS26675 (43910) | 43910..44277 | - | 368 | Protein_46 | IS3 family transposase | - |
| QDX09_RS26680 (44458) | 44458..45360 | - | 903 | WP_096112685.1 | F18 fimbrial adhesin subunit FedF | - |
| QDX09_RS26685 (45658) | 45658..46197 | - | 540 | WP_077249094.1 | F18 fimbrial subunit FedE | - |
| QDX09_RS26690 (46160) | 46160..46852 | - | 693 | WP_001037287.1 | Chaperone protein FaeE | VF |
| QDX09_RS26695 (46845) | 46845..49259 | - | 2415 | WP_000747724.1 | Outer membrane usher protein YraJ | VF |
| QDX09_RS26700 (49352) | 49352..49867 | - | 516 | WP_169030710.1 | F18 fimbrial major subunit FedA | - |
| QDX09_RS26705 (50487) | 50487..51066 | - | 580 | Protein_52 | transposase | - |
| QDX09_RS26710 (51097) | 51097..51330 | - | 234 | WP_282862759.1 | hypothetical protein | - |
| QDX09_RS26715 (51454) | 51454..52641 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26720 (52641) | 52641..53006 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS26725 (53429) | 53429..53902 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QDX09_RS26730 (54692) | 54692..54787 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| QDX09_RS26735 (55240) | 55240..55662 | - | 423 | WP_001398192.1 | hypothetical protein | - |
| QDX09_RS26740 (55834) | 55834..56097 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| QDX09_RS26745 (56236) | 56236..57648 | - | 1413 | Protein_60 | DNA topoisomerase | - |
| QDX09_RS26750 (57730) | 57730..58095 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDX09_RS26755 (58095) | 58095..59282 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDX09_RS26760 (59458) | 59458..59817 | + | 360 | Protein_63 | IS91 family transposase ISEc37 | Transposase |
| QDX09_RS26765 (60100) | 60100..60375 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX09_RS26770 (60375) | 60375..60659 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDX09_RS26775 (61569) | 61569..62426 | - | 858 | WP_024233440.1 | incFII family plasmid replication initiator RepA | - |
| QDX09_RS26780 (62419) | 62419..62493 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QDX09_RS26785 (62730) | 62730..62984 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| QDX09_RS26790 (63249) | 63249..63581 | - | 333 | WP_152916585.1 | hypothetical protein | - |
| QDX09_RS26795 (63643) | 63643..64242 | - | 600 | WP_063082122.1 | PIN domain-containing protein | - |
| QDX09_RS26800 (64629) | 64629..64829 | - | 201 | WP_015059022.1 | hypothetical protein | - |
| QDX09_RS26805 (64961) | 64961..65521 | - | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| QDX09_RS26810 (65576) | 65576..66322 | - | 747 | WP_063082121.1 | conjugal transfer pilus acetylase TraX | - |
| QDX09_RS26815 (66342) | 66342..71612 | - | 5271 | WP_063101737.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDX09_RS26820 (71612) | 71612..73810 | - | 2199 | WP_089560839.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDX09_RS26825 (73861) | 73861..74598 | - | 738 | WP_000199911.1 | hypothetical protein | - |
| QDX09_RS26830 (74801) | 74801..75532 | - | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QDX09_RS26835 (75565) | 75565..76062 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| QDX09_RS26840 (76081) | 76081..78900 | - | 2820 | WP_282862749.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDX09_RS26845 (78897) | 78897..80270 | - | 1374 | WP_042634326.1 | conjugal transfer pilus assembly protein TraH | - |
| QDX09_RS26850 (80257) | 80257..80649 | - | 393 | WP_042634327.1 | F-type conjugal transfer protein TrbF | - |
| QDX09_RS26855 (80636) | 80636..80977 | - | 342 | WP_071528036.1 | P-type conjugative transfer protein TrbJ | - |
| QDX09_RS26860 (80907) | 80907..81452 | - | 546 | WP_042634328.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDX09_RS26865 (81439) | 81439..81723 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDX09_RS26870 (81804) | 81804..82118 | + | 315 | WP_063082139.1 | hypothetical protein | - |
| QDX09_RS26875 (82120) | 82120..82467 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QDX09_RS26880 (82483) | 82483..83226 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDX09_RS26885 (83219) | 83219..83476 | - | 258 | WP_000864317.1 | conjugal transfer protein TrbE | - |
| QDX09_RS26890 (83503) | 83503..85311 | - | 1809 | WP_111986947.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDX09_RS26895 (85308) | 85308..85946 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDX09_RS26900 (85974) | 85974..86426 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| QDX09_RS26905 (86456) | 86456..86917 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| QDX09_RS26910 (86943) | 86943..87935 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QDX09_RS26915 (87932) | 87932..88564 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| QDX09_RS26920 (88561) | 88561..88947 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QDX09_RS26925 (88944) | 88944..91571 | - | 2628 | WP_063082140.1 | type IV secretion system protein TraC | - |
| QDX09_RS26930 (91731) | 91731..91952 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| QDX09_RS26935 (92087) | 92087..92602 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDX09_RS26940 (92599) | 92599..92919 | - | 321 | WP_001057283.1 | conjugal transfer protein TrbD | - |
| QDX09_RS26945 (92906) | 92906..93490 | - | 585 | WP_009424415.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDX09_RS26950 (93480) | 93480..94907 | - | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDX09_RS26955 (94907) | 94907..95635 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDX09_RS26960 (95622) | 95622..96188 | - | 567 | WP_000399793.1 | type IV conjugative transfer system protein TraE | - |
| QDX09_RS26965 (96210) | 96210..96521 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDX09_RS26970 (96526) | 96526..96888 | - | 363 | WP_033566647.1 | type IV conjugative transfer system pilin TraA | - |
| QDX09_RS26975 (96922) | 96922..97149 | - | 228 | WP_000589558.1 | conjugal transfer relaxosome protein TraY | - |
| QDX09_RS26980 (97269) | 97269..97916 | - | 648 | WP_042634329.1 | transcriptional regulator TraJ family protein | - |
| QDX09_RS26985 (98108) | 98108..98491 | - | 384 | WP_001151530.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDX09_RS26990 (98845) | 98845..99414 | + | 570 | Protein_109 | hypothetical protein | VF |
| QDX09_RS26995 (99712) | 99712..100533 | - | 822 | WP_042634481.1 | DUF932 domain-containing protein | - |
| QDX09_RS27000 (100639) | 100639..100935 | - | 297 | WP_021558926.1 | hypothetical protein | - |
| QDX09_RS27005 (100959) | 100959..101165 | - | 207 | WP_042634482.1 | hypothetical protein | - |
| QDX09_RS27010 (101235) | 101235..101555 | + | 321 | Protein_113 | hypothetical protein | - |
| QDX09_RS27015 (101581) | 101581..103152 | - | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| QDX09_RS27020 (103172) | 103172..103519 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDX09_RS27025 (103519) | 103519..104169 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDX09_RS27030 (104544) | 104544..104645 | - | 102 | WP_151318007.1 | type I toxin-antitoxin system Hok family toxin | - |
| QDX09_RS27035 (104611) | 104611..104688 | - | 78 | Protein_118 | DUF5431 family protein | - |
| - (104754) | 104754..104902 | - | 149 | NuclAT_0 | - | - |
| - (104754) | 104754..104902 | - | 149 | NuclAT_0 | - | - |
| - (104754) | 104754..104902 | - | 149 | NuclAT_0 | - | - |
| - (104754) | 104754..104902 | - | 149 | NuclAT_0 | - | - |
| QDX09_RS27040 (104878) | 104878..105396 | - | 519 | WP_001178554.1 | hypothetical protein | - |
| QDX09_RS27045 (105396) | 105396..106115 | - | 720 | WP_042634414.1 | plasmid SOS inhibition protein A | - |
| QDX09_RS27050 (106112) | 106112..106546 | - | 435 | WP_042634413.1 | conjugation system SOS inhibitor PsiB | - |
| QDX09_RS27055 (106601) | 106601..108559 | - | 1959 | WP_042634412.1 | ParB/RepB/Spo0J family partition protein | - |
| QDX09_RS27060 (108623) | 108623..108856 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| QDX09_RS27065 (108912) | 108912..109442 | - | 531 | WP_032214168.1 | single-stranded DNA-binding protein | - |
| QDX09_RS27070 (109468) | 109468..109674 | - | 207 | WP_000547945.1 | hypothetical protein | - |
| QDX09_RS27075 (110274) | 110274..110837 | - | 564 | WP_042634411.1 | class I SAM-dependent methyltransferase | - |
| QDX09_RS27080 (110884) | 110884..112245 | - | 1362 | WP_063082129.1 | DUF3560 domain-containing protein | - |
| QDX09_RS27085 (112297) | 112297..112527 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QDX09_RS27090 (113044) | 113044..113198 | + | 155 | Protein_129 | hypothetical protein | - |
| QDX09_RS27095 (113558) | 113558..113749 | - | 192 | WP_001027504.1 | hypothetical protein | - |
| QDX09_RS27100 (113746) | 113746..114168 | - | 423 | WP_042634409.1 | DUF1380 family protein | - |
| QDX09_RS27105 (114215) | 114215..114640 | - | 426 | WP_042634408.1 | antirestriction protein | - |
| QDX09_RS27110 (115054) | 115054..115830 | - | 777 | WP_045909438.1 | hypothetical protein | - |
| QDX09_RS27115 (115881) | 115881..116397 | - | 517 | Protein_134 | DUF1380 family protein | - |
| QDX09_RS27120 (116327) | 116327..116548 | - | 222 | WP_001104893.1 | hypothetical protein | - |
| QDX09_RS27125 (116549) | 116549..117232 | - | 684 | WP_042634423.1 | DNA methylase | - |
| QDX09_RS27130 (117308) | 117308..117618 | - | 311 | Protein_137 | hypothetical protein | - |
| QDX09_RS27135 (117615) | 117615..118517 | - | 903 | WP_001393259.1 | DUF1281 domain-containing protein | - |
| QDX09_RS27140 (118956) | 118956..119915 | + | 960 | WP_000921958.1 | plasmid segregation protein ParM | - |
| QDX09_RS27145 (119915) | 119915..120309 | + | 395 | Protein_140 | plasmid partitioning/stability family protein | - |
| QDX09_RS27150 (120451) | 120451..121362 | - | 912 | WP_024244186.1 | hypothetical protein | VF |
| QDX09_RS27155 (121374) | 121374..121478 | - | 105 | Protein_142 | hypothetical protein | - |
| QDX09_RS27160 (121451) | 121451..122593 | - | 1143 | WP_158649904.1 | YiiX/YebB-like N1pC/P60 family cysteine hydrolase | - |
| QDX09_RS27165 (122902) | 122902..123180 | - | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | - |
| QDX09_RS27170 (123180) | 123180..123449 | - | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|