MGE detailed information
MGE type: Genomic_island MGE length: 38032 bp
Accession: NZ_CP122880 Location: 4005845..4043876 Organism: Escherichia coli strain ETEC1716 Replicon: chromosome
Accession: NZ_CP122880 Location: 4005845..4043876 Organism: Escherichia coli strain ETEC1716 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (4001433) | 4001433..4001513 | - | 81 | NuclAT_12 | - | - |
| - (4001433) | 4001433..4001513 | - | 81 | NuclAT_12 | - | - |
| - (4001433) | 4001433..4001513 | - | 81 | NuclAT_12 | - | - |
| - (4001433) | 4001433..4001513 | - | 81 | NuclAT_12 | - | - |
| QDX09_RS20100 (4002109) | 4002109..4002567 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QDX09_RS20105 (4002828) | 4002828..4004285 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| QDX09_RS20110 (4004342) | 4004342..4004863 | - | 522 | Protein_3937 | peptide chain release factor H | - |
| QDX09_RS20115 (4004859) | 4004859..4005065 | - | 207 | Protein_3938 | RtcB family protein | - |
| QDX09_RS20120 (4005383) | 4005383..4005835 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| QDX09_RS20125 (4005845) | 4005845..4006243 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QDX09_RS20130 (4006246) | 4006246..4006539 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QDX09_RS20135 (4006591) | 4006591..4007647 | - | 1057 | Protein_3942 | DNA polymerase IV | - |
| QDX09_RS20140 (4007718) | 4007718..4008503 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| QDX09_RS20145 (4008475) | 4008475..4010187 | + | 1713 | Protein_3944 | Flagellar biosynthesis protein FlhA | VF |
| QDX09_RS20150 (4010411) | 4010411..4010908 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QDX09_RS20155 (4011084) | 4011084..4011833 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| QDX09_RS20160 (4012043) | 4012043..4012303 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| QDX09_RS20165 (4012306) | 4012306..4012584 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| QDX09_RS20170 (4012740) | 4012740..4013480 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QDX09_RS20175 (4013451) | 4013451..4014218 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QDX09_RS20180 (4014424) | 4014424..4015002 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QDX09_RS20185 (4015242) | 4015242..4017686 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| QDX09_RS20190 (4017729) | 4017729..4018175 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QDX09_RS20195 (4018356) | 4018356..4019126 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| QDX09_RS20200 (4019167) | 4019167..4020303 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| QDX09_RS20205 (4020734) | 4020734..4020910 | - | 177 | WP_000008098.1 | hypothetical protein | - |
| QDX09_RS20210 (4020907) | 4020907..4021128 | - | 222 | WP_001101840.1 | hypothetical protein | - |
| QDX09_RS20215 (4021106) | 4021106..4025338 | - | 4233 | WP_000015445.1 | Protein RhsD | VF |
| QDX09_RS20220 (4025415) | 4025415..4025864 | - | 450 | WP_001372445.1 | RHS element protein dsORF-h1 | - |
| QDX09_RS20225 (4025935) | 4025935..4027071 | - | 1137 | WP_000420722.1 | ISAs1 family transposase ISEc1 | Transposase |
| QDX09_RS20230 (4027540) | 4027540..4027917 | - | 378 | WP_001077738.1 | hypothetical protein | - |
| QDX09_RS20235 (4027917) | 4027917..4029602 | - | 1686 | Protein_3962 | hypothetical protein | VF |
| QDX09_RS20240 (4029602) | 4029602..4031026 | + | 1425 | Protein_3963 | Protein ClpV1 | VF |
| QDX09_RS20245 (4031020) | 4031020..4031370 | + | 351 | Protein_3964 | hypothetical protein | VF |
| QDX09_RS20250 (4031375) | 4031375..4032787 | + | 1413 | WP_001240525.1 | hypothetical protein | VF |
| QDX09_RS20255 (4032896) | 4032896..4036330 | + | 3435 | WP_122545204.1 | hypothetical protein | VF |
| QDX09_RS20260 (4036341) | 4036341..4037790 | + | 1450 | Protein_3967 | hypothetical protein | VF |
| QDX09_RS20265 (4037717) | 4037717..4038199 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| QDX09_RS20270 (4038243) | 4038243..4039157 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| QDX09_RS20275 (4039167) | 4039167..4039646 | + | 480 | WP_001236645.1 | protein YkfM | - |
| QDX09_RS20280 (4039783) | 4039783..4040568 | - | 786 | WP_001086141.1 | lipoprotein | - |
| QDX09_RS20290 (4041105) | 4041105..4041836 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| QDX09_RS20295 (4041901) | 4041901..4042368 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| QDX09_RS20300 (4042365) | 4042365..4043087 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| QDX09_RS20305 (4043121) | 4043121..4043876 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| QDX09_RS20310 (4043948) | 4043948..4045306 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| QDX09_RS20315 (4045354) | 4045354..4045950 | - | 597 | Protein_3977 | methyltransferase domain-containing protein | - |
| QDX09_RS20320 (4045981) | 4045981..4046781 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QDX09_RS20325 (4047022) | 4047022..4047936 | + | 915 | WP_096937629.1 | DNA-binding transcriptional regulator YafC | - |
| QDX09_RS20330 (4047933) | 4047933..4048736 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|