MGE detailed information
MGE type: Conjugative plasmid MGE length: 94250 bp
Accession: NZ_CP122838 Location: 1..94250 Organism: Escherichia coli strain ETEC1729 Replicon: plasmid unnamed1
Accession: NZ_CP122838 Location: 1..94250 Organism: Escherichia coli strain ETEC1729 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW97_RS24280 (1) | 1..2820 | + | 2820 | WP_001007033.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDW97_RS24285 (2823) | 2823..3134 | - | 312 | WP_000522220.1 | heavy metal-binding domain-containing protein | - |
| QDW97_RS24290 (3349) | 3349..4041 | + | 693 | WP_282842692.1 | hypothetical protein | - |
| QDW97_RS24295 (4362) | 4362..6560 | + | 2199 | WP_282843774.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDW97_RS24300 (6560) | 6560..11830 | + | 5271 | WP_282843775.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| QDW97_RS24305 (11850) | 11850..12593 | + | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
| QDW97_RS24310 (12648) | 12648..13208 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| QDW97_RS24315 (13344) | 13344..13559 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| QDW97_RS24320 (13803) | 13803..13889 | + | 87 | Protein_9 | endonuclease | - |
| QDW97_RS24325 (14070) | 14070..14381 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| - (14677) | 14677..14738 | - | 62 | NuclAT_1 | - | - |
| - (14677) | 14677..14738 | - | 62 | NuclAT_1 | - | - |
| - (14677) | 14677..14738 | - | 62 | NuclAT_1 | - | - |
| - (14677) | 14677..14738 | - | 62 | NuclAT_1 | - | - |
| QDW97_RS24335 (16097) | 16097..16492 | - | 396 | Protein_12 | ATP-binding protein | - |
| QDW97_RS24340 (16840) | 16840..17214 | - | 375 | WP_015675362.1 | hypothetical protein | VF |
| QDW97_RS24345 (17211) | 17211..17987 | - | 777 | WP_042634421.1 | hypothetical protein | VF |
| QDW97_RS24350 (18261) | 18261..18465 | - | 205 | Protein_15 | IS110 family transposase | - |
| QDW97_RS24355 (18854) | 18854..19567 | + | 714 | WP_001424997.1 | hypothetical protein | - |
| QDW97_RS24360 (19779) | 19779..20749 | + | 971 | Protein_17 | IS481 family transposase ISEc18 | Transposase |
| QDW97_RS24365 (20841) | 20841..21484 | - | 644 | Protein_18 | DDE-type integrase/transposase/recombinase | - |
| QDW97_RS24370 (21510) | 21510..22090 | + | 581 | Protein_19 | IS256 family transposase | - |
| QDW97_RS24375 (22567) | 22567..22782 | + | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| QDW97_RS24380 (23170) | 23170..24142 | + | 973 | Protein_21 | IS3 family transposase | - |
| QDW97_RS24385 (24200) | 24200..24877 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QDW97_RS24390 (24877) | 24877..25224 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QDW97_RS24395 (25244) | 25244..26815 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| QDW97_RS24400 (26847) | 26847..26987 | + | 141 | Protein_25 | integrase core domain-containing protein | - |
| QDW97_RS24405 (27103) | 27103..28638 | - | 1536 | WP_001424993.1 | hypothetical protein | VF |
| QDW97_RS24410 (28706) | 28706..28807 | - | 102 | Protein_27 | restriction endonuclease subunit M | - |
| QDW97_RS24415 (28935) | 28935..29674 | - | 740 | Protein_28 | IS110 family transposase | - |
| QDW97_RS24420 (29901) | 29901..30638 | - | 738 | WP_282843776.1 | Ig-like domain-containing protein | - |
| QDW97_RS24425 (30657) | 30657..31022 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW97_RS24430 (31022) | 31022..32209 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW97_RS24435 (32390) | 32390..33274 | - | 885 | WP_282843777.1 | TolC family protein | - |
| QDW97_RS24440 (33271) | 33271..33717 | - | 447 | WP_282843778.1 | hypothetical protein | - |
| QDW97_RS24445 (34058) | 34058..34525 | - | 468 | WP_063119456.1 | hypothetical protein | - |
| QDW97_RS24450 (34529) | 34529..34846 | - | 318 | WP_086200691.1 | Transcriptional regulatory protein RcsB | VF |
| QDW97_RS24455 (35033) | 35033..35884 | - | 852 | WP_096932384.1 | HTH-type transcriptional activator RhaS | VF |
| QDW97_RS24460 (36094) | 36094..36443 | - | 350 | Protein_37 | IS3 family transposase IS2 | Transposase |
| QDW97_RS24465 (36503) | 36503..37181 | - | 679 | Protein_38 | IS3 family transposase ISKpn38 | Transposase |
| QDW97_RS24470 (37276) | 37276..38039 | + | 764 | Protein_39 | IS3 family transposase IS2 | Transposase |
| QDW97_RS24475 (38353) | 38353..38733 | - | 381 | WP_282843779.1 | IS3 family transposase ISBmu11 | Transposase |
| QDW97_RS24480 (38811) | 38811..38984 | - | 174 | Protein_41 | IS3 family transposase | - |
| QDW97_RS24485 (39183) | 39183..39880 | - | 698 | Protein_42 | IS21 family transposase IS100 | Transposase |
| QDW97_RS24490 (39877) | 39877..40886 | - | 1010 | Protein_43 | IS21 family transposase IS100kyp | Transposase |
| QDW97_RS24495 (40939) | 40939..42038 | + | 1100 | Protein_44 | IS3 family transposase IS3F | Transposase |
| QDW97_RS24500 (42385) | 42385..42708 | - | 324 | WP_230909587.1 | Transcriptional regulator SlyA | VF |
| QDW97_RS24505 (42757) | 42757..42885 | - | 129 | Protein_46 | Transcriptional regulator SlyA | VF |
| QDW97_RS24510 (43399) | 43399..43641 | - | 243 | WP_074156120.1 | toxin-activating lysine-acyltransferase | - |
| QDW97_RS24515 (44092) | 44092..44201 | + | 110 | Protein_48 | IS5/IS1182 family transposase | - |
| QDW97_RS24520 (44724) | 44724..44974 | + | 251 | Protein_49 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDW97_RS24525 (44961) | 44961..45255 | + | 295 | Protein_50 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW97_RS24530 (45618) | 45618..46358 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDW97_RS24535 (46643) | 46643..47620 | - | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDW97_RS24540 (48300) | 48300..48545 | - | 246 | Protein_53 | integrase core domain-containing protein | - |
| QDW97_RS24545 (48547) | 48547..48834 | - | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW97_RS24550 (48831) | 48831..49082 | - | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDW97_RS24555 (49255) | 49255..49467 | - | 213 | WP_000402944.1 | hypothetical protein | - |
| QDW97_RS24560 (49841) | 49841..51046 | + | 1206 | WP_000817634.1 | hypothetical protein | VF |
| QDW97_RS24565 (51043) | 51043..52005 | + | 963 | WP_000756327.1 | ParB family protein | - |
| QDW97_RS24570 (52239) | 52239..53016 | + | 778 | Protein_59 | transposase DNA-binding-containing protein | - |
| QDW97_RS24575 (53146) | 53146..53229 | - | 84 | Protein_60 | DUF4113 domain-containing protein | - |
| QDW97_RS24580 (53231) | 53231..53759 | + | 529 | Protein_61 | DUF1281 domain-containing protein | - |
| QDW97_RS24585 (53756) | 53756..54067 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| QDW97_RS24590 (54144) | 54144..54215 | + | 72 | Protein_63 | hypothetical protein | - |
| QDW97_RS24595 (54297) | 54297..55997 | - | 1701 | WP_000125555.1 | group II intron reverse transcriptase/maturase | - |
| QDW97_RS24600 (56619) | 56619..57230 | + | 612 | Protein_65 | DNA methylase | - |
| QDW97_RS24605 (57231) | 57231..57452 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| QDW97_RS24610 (57466) | 57466..57898 | + | 433 | Protein_67 | DUF1380 family protein | - |
| QDW97_RS24615 (57949) | 57949..58728 | + | 780 | WP_001423681.1 | hypothetical protein | - |
| QDW97_RS24620 (59145) | 59145..59570 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QDW97_RS24625 (59617) | 59617..60036 | + | 420 | WP_236272903.1 | DUF1380 domain-containing protein | - |
| QDW97_RS24630 (60036) | 60036..60227 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDW97_RS24635 (61214) | 61214..61430 | + | 217 | Protein_72 | hypothetical protein | - |
| QDW97_RS24640 (61482) | 61482..62843 | + | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| QDW97_RS24645 (62890) | 62890..63453 | + | 564 | WP_001423687.1 | class I SAM-dependent methyltransferase | - |
| QDW97_RS24650 (63539) | 63539..63951 | - | 413 | Protein_75 | hypothetical protein | - |
| QDW97_RS24655 (64021) | 64021..64227 | + | 207 | WP_000275848.1 | hypothetical protein | - |
| QDW97_RS24660 (64253) | 64253..64792 | + | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| QDW97_RS24665 (64854) | 64854..65087 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDW97_RS24670 (65151) | 65151..67109 | + | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW97_RS24675 (67164) | 67164..67598 | + | 435 | WP_000845912.1 | conjugation system SOS inhibitor PsiB | - |
| QDW97_RS24680 (67595) | 67595..68357 | + | 763 | Protein_81 | plasmid SOS inhibition protein A | - |
| - (68326) | 68326..68524 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68326) | 68326..68524 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68326) | 68326..68524 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| - (68326) | 68326..68524 | + | 199 | NuclAT_0 | - | Antitoxin Detail |
| QDW97_RS24685 (68531) | 68531..68680 | + | 150 | Protein_82 | DUF5431 family protein | - |
| QDW97_RS24690 (68622) | 68622..68747 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDW97_RS24695 (69048) | 69048..69234 | - | 187 | Protein_84 | pilus protein | - |
| QDW97_RS24700 (69294) | 69294..69581 | + | 288 | WP_000107541.1 | hypothetical protein | - |
| QDW97_RS24705 (69699) | 69699..70520 | + | 822 | WP_001424949.1 | DUF932 domain-containing protein | - |
| QDW97_RS24710 (70816) | 70816..71418 | - | 603 | WP_077632063.1 | hypothetical protein | VF |
| QDW97_RS24715 (71740) | 71740..72123 | + | 384 | WP_001151534.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDW97_RS24720 (72314) | 72314..72961 | + | 648 | WP_000332521.1 | conjugal transfer transcriptional regulator TraJ | - |
| QDW97_RS24725 (73097) | 73097..73312 | + | 216 | WP_071782156.1 | conjugal transfer relaxosome protein TraY | - |
| QDW97_RS24730 (73356) | 73356..73721 | + | 366 | WP_000338819.1 | type IV conjugative transfer system pilin TraA | - |
| QDW97_RS24735 (73736) | 73736..74047 | + | 312 | WP_000012125.1 | type IV conjugative transfer system protein TraL | - |
| QDW97_RS24740 (74069) | 74069..74635 | + | 567 | WP_064986971.1 | type IV conjugative transfer system protein TraE | - |
| QDW97_RS24745 (74622) | 74622..75350 | + | 729 | WP_001230776.1 | type-F conjugative transfer system secretin TraK | - |
| QDW97_RS24750 (75350) | 75350..76798 | + | 1449 | WP_000146643.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDW97_RS24755 (76788) | 76788..77372 | + | 585 | WP_282843780.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDW97_RS24760 (77359) | 77359..77556 | + | 198 | WP_001423674.1 | conjugal transfer protein TrbD | - |
| QDW97_RS24765 (77568) | 77568..77819 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| QDW97_RS24770 (77816) | 77816..78331 | + | 516 | WP_000809905.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDW97_RS24775 (78466) | 78466..78687 | + | 222 | WP_001278685.1 | conjugal transfer protein TraR | - |
| QDW97_RS24780 (78847) | 78847..81474 | + | 2628 | WP_001064261.1 | type IV secretion system protein TraC | - |
| QDW97_RS24785 (81471) | 81471..81857 | + | 387 | WP_000214057.1 | type-F conjugative transfer system protein TrbI | - |
| QDW97_RS24790 (81854) | 81854..82486 | + | 633 | WP_001203748.1 | type-F conjugative transfer system protein TraW | - |
| QDW97_RS24795 (82483) | 82483..83475 | + | 993 | WP_000830834.1 | conjugal transfer pilus assembly protein TraU | - |
| QDW97_RS24800 (83501) | 83501..83964 | + | 464 | Protein_105 | ATP-binding protein | - |
| QDW97_RS24805 (83975) | 83975..84289 | + | 315 | WP_001423717.1 | hypothetical protein | - |
| QDW97_RS24810 (84282) | 84282..84734 | + | 453 | WP_001385157.1 | hypothetical protein | - |
| QDW97_RS24815 (84762) | 84762..85400 | + | 639 | WP_001104087.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDW97_RS24820 (85397) | 85397..87205 | + | 1809 | WP_000821839.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDW97_RS24825 (87306) | 87306..87956 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDW97_RS24830 (87956) | 87956..88303 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDW97_RS24835 (88323) | 88323..89894 | + | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| QDW97_RS24840 (89944) | 89944..90201 | + | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| QDW97_RS24845 (90194) | 90194..90937 | + | 744 | WP_282843773.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDW97_RS24850 (90953) | 90953..91300 | + | 348 | WP_001287903.1 | conjugal transfer protein TrbA | - |
| QDW97_RS24855 (91419) | 91419..91703 | + | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDW97_RS24860 (91690) | 91690..92244 | + | 555 | WP_000052621.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDW97_RS24865 (92234) | 92234..92548 | + | 315 | WP_001385158.1 | P-type conjugative transfer protein TrbJ | - |
| QDW97_RS24870 (92502) | 92502..92894 | + | 393 | WP_000126336.1 | F-type conjugal transfer protein TrbF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|