MGE detailed information
MGE type: Conjugative plasmid MGE length: 104099 bp
Accession: NZ_CP122835 Location: 1..104099 Organism: Escherichia coli strain ETEC1730 Replicon: plasmid unnamed3
Accession: NZ_CP122835 Location: 1..104099 Organism: Escherichia coli strain ETEC1730 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY27_RS26625 (1) | 1..2292 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDY27_RS26630 (2328) | 2328..5027 | - | 2700 | WP_087050376.1 | Protein TraI | Relaxase |
| QDY27_RS26635 (5038) | 5038..5370 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDY27_RS26640 (5604) | 5604..5939 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDY27_RS26645 (6024) | 6024..6872 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| QDY27_RS26650 (7452) | 7452..7703 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| QDY27_RS26655 (7734) | 7734..7916 | - | 183 | WP_000150323.1 | hypothetical protein | - |
| QDY27_RS26660 (7980) | 7980..8894 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| QDY27_RS26665 (8959) | 8959..9225 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| QDY27_RS26670 (9318) | 9318..9752 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| QDY27_RS26675 (10481) | 10481..10981 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| QDY27_RS26680 (11444) | 11444..12040 | - | 597 | WP_000978005.1 | hypothetical protein | - |
| QDY27_RS26685 (12037) | 12037..12756 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDY27_RS26690 (12753) | 12753..13187 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| QDY27_RS26695 (13242) | 13242..15200 | - | 1959 | WP_001145471.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY27_RS26700 (15259) | 15259..15492 | - | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| QDY27_RS26705 (15550) | 15550..16077 | - | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| QDY27_RS26710 (17244) | 17244..18911 | + | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| QDY27_RS26715 (19190) | 19190..19381 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QDY27_RS26720 (19378) | 19378..19800 | - | 423 | WP_000271741.1 | DUF1380 family protein | - |
| QDY27_RS26725 (19847) | 19847..20272 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QDY27_RS26730 (20689) | 20689..21459 | - | 771 | WP_282843576.1 | hypothetical protein | - |
| QDY27_RS26735 (21510) | 21510..21976 | - | 467 | Protein_23 | DUF1380 family protein | - |
| QDY27_RS26740 (21957) | 21957..22178 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| QDY27_RS26745 (22179) | 22179..22862 | - | 684 | WP_000086144.1 | DNA methylase | - |
| QDY27_RS26750 (22938) | 22938..23243 | - | 306 | WP_015058890.1 | hypothetical protein | - |
| QDY27_RS26755 (23247) | 23247..24149 | - | 903 | WP_001442863.1 | DUF1281 domain-containing protein | - |
| QDY27_RS26760 (24567) | 24567..24815 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDY27_RS26765 (24812) | 24812..25249 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDY27_RS26770 (25249) | 25249..26520 | + | 1272 | WP_134737638.1 | Y-family DNA polymerase | - |
| QDY27_RS26775 (26525) | 26525..26917 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| QDY27_RS26780 (26922) | 26922..27893 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| QDY27_RS26785 (28122) | 28122..28766 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| QDY27_RS26790 (28760) | 28760..29035 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| QDY27_RS26795 (29173) | 29173..29955 | - | 783 | WP_001372173.1 | site-specific integrase | - |
| QDY27_RS26800 (30023) | 30023..30631 | - | 609 | WP_000715519.1 | hypothetical protein | - |
| QDY27_RS26805 (30701) | 30701..31051 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| QDY27_RS26810 (31602) | 31602..32690 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| QDY27_RS26815 (32692) | 32692..34917 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| QDY27_RS26820 (34967) | 34967..35866 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| QDY27_RS26825 (35856) | 35856..36146 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| QDY27_RS26830 (36442) | 36442..36672 | + | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QDY27_RS26835 (36669) | 36669..37085 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QDY27_RS26840 (37247) | 37247..39385 | - | 2139 | WP_000350639.1 | AAA family ATPase | - |
| QDY27_RS26845 (39893) | 39893..40597 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QDY27_RS26850 (40660) | 40660..40755 | + | 96 | Protein_46 | helix-turn-helix domain-containing protein | - |
| QDY27_RS26855 (40938) | 40938..41798 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDY27_RS26860 (41945) | 41945..42226 | + | 282 | Protein_48 | transposase zinc-binding domain-containing protein | - |
| QDY27_RS26865 (42396) | 42396..43100 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QDY27_RS26870 (43290) | 43290..44105 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QDY27_RS26880 (45000) | 45000..46310 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| QDY27_RS26885 (46595) | 46595..46996 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QDY27_RS26890 (46929) | 46929..47186 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QDY27_RS26895 (47279) | 47279..47470 | - | 192 | WP_282843575.1 | CPBP family glutamic-type intramembrane protease | - |
| QDY27_RS26900 (47575) | 47575..47940 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY27_RS26905 (47940) | 47940..48584 | + | 645 | Protein_57 | IS91 family transposase IS91 | Transposase |
| QDY27_RS26910 (48652) | 48652..49017 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY27_RS26915 (49017) | 49017..50204 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY27_RS26920 (50377) | 50377..50838 | - | 462 | WP_106914169.1 | histidine phosphatase family protein | - |
| QDY27_RS26925 (50936) | 50936..51076 | - | 141 | WP_001347369.1 | hypothetical protein | - |
| QDY27_RS26930 (51772) | 51772..52803 | - | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| QDY27_RS26935 (53809) | 53809..54039 | + | 231 | WP_228772074.1 | ash family protein | - |
| QDY27_RS26940 (53957) | 53957..54244 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDY27_RS26945 (54686) | 54686..55219 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QDY27_RS26950 (55473) | 55473..56156 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QDY27_RS26955 (56407) | 56407..57057 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDY27_RS26960 (57057) | 57057..57404 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDY27_RS26965 (57424) | 57424..58995 | + | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| QDY27_RS26970 (59041) | 59041..59592 | + | 552 | WP_000744644.1 | hypothetical protein | - |
| QDY27_RS26975 (59754) | 59754..60008 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDY27_RS26980 (60184) | 60184..60480 | + | 297 | WP_000494779.1 | hypothetical protein | - |
| QDY27_RS26985 (61104) | 61104..62169 | + | 1066 | Protein_73 | hypothetical protein | VF |
| QDY27_RS26990 (62169) | 62169..62606 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDY27_RS26995 (62620) | 62620..64302 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QDY27_RS27000 (64295) | 64295..65590 | + | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QDY27_RS27005 (65577) | 65577..66029 | + | 453 | WP_001247334.1 | hypothetical protein | VF |
| QDY27_RS27010 (66040) | 66040..67593 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QDY27_RS27015 (67606) | 67606..68703 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDY27_RS27020 (68721) | 68721..69335 | + | 615 | WP_000959786.1 | hypothetical protein | VF |
| QDY27_RS27025 (69345) | 69345..69905 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDY27_RS27030 (69890) | 69890..70546 | + | 657 | WP_001389386.1 | hypothetical protein | VF |
| QDY27_RS27035 (70546) | 70546..71760 | + | 1215 | WP_282843571.1 | hypothetical protein | VF |
| QDY27_RS27040 (72894) | 72894..73175 | - | 282 | WP_282843572.1 | hypothetical protein | - |
| QDY27_RS27045 (73371) | 73371..74525 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDY27_RS27050 (74676) | 74676..75500 | + | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| QDY27_RS27055 (75586) | 75586..76788 | + | 1203 | WP_000976349.1 | conjugal transfer protein TraF | - |
| QDY27_RS27060 (76848) | 76848..77432 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDY27_RS27065 (77827) | 77827..78285 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDY27_RS27070 (78282) | 78282..79100 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDY27_RS27075 (79097) | 79097..80245 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDY27_RS27080 (80242) | 80242..80532 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| QDY27_RS27085 (80547) | 80547..81098 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| QDY27_RS27090 (81188) | 81188..84955 | + | 3768 | WP_282843573.1 | DUF5710 domain-containing protein | - |
| QDY27_RS27095 (84973) | 84973..85320 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDY27_RS27100 (85317) | 85317..86009 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QDY27_RS27105 (86020) | 86020..87003 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| QDY27_RS27110 (87006) | 87006..88295 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| QDY27_RS27115 (88295) | 88295..88999 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDY27_RS27120 (88999) | 88999..89526 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDY27_RS27125 (89577) | 89577..89981 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QDY27_RS27130 (90045) | 90045..90233 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDY27_RS27135 (90217) | 90217..91017 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDY27_RS27140 (91107) | 91107..94151 | + | 3045 | WP_282843574.1 | IncI1-type conjugal transfer protein TraU | - |
| QDY27_RS27145 (94151) | 94151..94765 | + | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| QDY27_RS27150 (94732) | 94732..95934 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QDY27_RS27155 (95963) | 95963..96547 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDY27_RS27160 (96644) | 96644..98811 | + | 2168 | Protein_108 | DotA/TraY family protein | - |
| QDY27_RS27165 (98885) | 98885..99535 | + | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDY27_RS27170 (99607) | 99607..99816 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDY27_RS27175 (100208) | 100208..100384 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| QDY27_RS27180 (100449) | 100449..100544 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDY27_RS27185 (101043) | 101043..101294 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| QDY27_RS27190 (101366) | 101366..101518 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (101573) | 101573..101630 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (101573) | 101573..101630 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (101573) | 101573..101630 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (101573) | 101573..101630 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| QDY27_RS27195 (101810) | 101810..103018 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|