MGE detailed information
MGE type: Conjugative plasmid MGE length: 91117 bp
Accession: NZ_CP122819 Location: 1..91117 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed3
Accession: NZ_CP122819 Location: 1..91117 Organism: Escherichia coli strain ETEC1731 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY29_RS25395 (1) | 1..177 | + | 177 | WP_001054904.1 | hypothetical protein | - |
| QDY29_RS25400 (242) | 242..337 | - | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QDY29_RS25405 (838) | 838..1089 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| QDY29_RS25410 (1161) | 1161..1313 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (1363) | 1363..1425 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (1363) | 1363..1425 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (1363) | 1363..1425 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (1363) | 1363..1425 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| QDY29_RS25415 (1940) | 1940..2719 | + | 780 | WP_275450201.1 | protein FinQ | - |
| - (2786) | 2786..2846 | + | 61 | NuclAT_1 | - | - |
| - (2786) | 2786..2846 | + | 61 | NuclAT_1 | - | - |
| - (2786) | 2786..2846 | + | 61 | NuclAT_1 | - | - |
| - (2786) | 2786..2846 | + | 61 | NuclAT_1 | - | - |
| QDY29_RS25420 (3026) | 3026..4234 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| QDY29_RS25425 (4253) | 4253..5323 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDY29_RS25430 (5316) | 5316..7607 | + | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDY29_RS25435 (7643) | 7643..10342 | - | 2700 | WP_001306778.1 | hypothetical protein | Relaxase |
| QDY29_RS25440 (10353) | 10353..10685 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDY29_RS25445 (10919) | 10919..11254 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDY29_RS25450 (11340) | 11340..12188 | - | 849 | WP_001077024.1 | DUF4942 domain-containing protein | - |
| QDY29_RS25455 (12768) | 12768..13019 | + | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDY29_RS25460 (13050) | 13050..13208 | - | 159 | WP_000150310.1 | hypothetical protein | - |
| QDY29_RS25465 (13271) | 13271..14185 | - | 915 | WP_000038401.1 | hypothetical protein | VF |
| QDY29_RS25470 (14250) | 14250..14516 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| QDY29_RS25475 (14610) | 14610..15044 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| QDY29_RS25480 (15349) | 15349..15633 | + | 285 | WP_021013251.1 | hypothetical protein | - |
| QDY29_RS25485 (15773) | 15773..16273 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QDY29_RS25490 (16736) | 16736..17332 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| QDY29_RS25495 (17329) | 17329..18048 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDY29_RS25500 (18045) | 18045..18479 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QDY29_RS25505 (18534) | 18534..20492 | - | 1959 | WP_282843041.1 | ParB/RepB/Spo0J family partition protein | - |
| QDY29_RS25510 (20551) | 20551..20784 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| QDY29_RS25515 (20842) | 20842..21369 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| QDY29_RS25520 (21571) | 21571..21948 | + | 378 | WP_024126038.1 | hypothetical protein | - |
| QDY29_RS25525 (22139) | 22139..22330 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| QDY29_RS25530 (22327) | 22327..22749 | - | 423 | WP_282843042.1 | hypothetical protein | - |
| QDY29_RS25535 (22796) | 22796..23221 | - | 426 | WP_001198941.1 | antirestriction protein | - |
| QDY29_RS25540 (23638) | 23638..24409 | - | 772 | Protein_29 | hypothetical protein | - |
| QDY29_RS25545 (24460) | 24460..24894 | - | 435 | WP_282843043.1 | DUF1380 family protein | - |
| QDY29_RS25550 (24907) | 24907..25128 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| QDY29_RS25555 (25129) | 25129..25812 | - | 684 | WP_000085874.1 | DNA methylase | - |
| QDY29_RS25560 (25888) | 25888..26199 | - | 312 | WP_032141194.1 | hypothetical protein | - |
| QDY29_RS25565 (26196) | 26196..27098 | - | 903 | WP_282843044.1 | DUF1281 domain-containing protein | - |
| QDY29_RS25570 (27516) | 27516..27764 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDY29_RS25575 (27761) | 27761..28198 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDY29_RS25580 (28198) | 28198..29472 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| QDY29_RS25585 (29474) | 29474..29890 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QDY29_RS25590 (29883) | 29883..30862 | - | 980 | Protein_39 | plasmid segregation protein ParM | - |
| QDY29_RS25595 (31276) | 31276..31584 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| QDY29_RS25600 (31671) | 31671..32315 | - | 645 | WP_001144036.1 | ParA family protein | - |
| QDY29_RS25605 (32495) | 32495..33274 | - | 780 | WP_001164201.1 | site-specific integrase | - |
| QDY29_RS25610 (33276) | 33276..33689 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| QDY29_RS25615 (34258) | 34258..34512 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| QDY29_RS25620 (34512) | 34512..35102 | + | 591 | WP_000194572.1 | hypothetical protein | - |
| QDY29_RS25625 (35122) | 35122..35469 | - | 348 | WP_001582578.1 | DUF6404 family protein | - |
| QDY29_RS25630 (35598) | 35598..35933 | + | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| QDY29_RS25635 (35955) | 35955..37835 | - | 1881 | WP_001582575.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDY29_RS25640 (38033) | 38033..39261 | + | 1229 | WP_089541817.1 | IS3 family transposase IS2 | Transposase |
| QDY29_RS25645 (39450) | 39450..40796 | - | 1347 | WP_001132032.1 | protein YagA | - |
| QDY29_RS25650 (41150) | 41150..41752 | + | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QDY29_RS25655 (41808) | 41808..42302 | + | 495 | WP_001582574.1 | hypothetical protein | - |
| QDY29_RS25660 (42302) | 42302..42568 | + | 267 | WP_000627829.1 | hypothetical protein | - |
| QDY29_RS25665 (42838) | 42838..43041 | - | 204 | Protein_54 | hypothetical protein | - |
| QDY29_RS25670 (43147) | 43147..43422 | - | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY29_RS25675 (43422) | 43422..43706 | - | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDY29_RS25680 (44614) | 44614..45645 | - | 1032 | WP_000907861.1 | plasmid replication initiator RepA | - |
| QDY29_RS25685 (46603) | 46603..46761 | + | 159 | Protein_58 | ash family protein | - |
| QDY29_RS25690 (46799) | 46799..47086 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QDY29_RS25695 (47528) | 47528..48061 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QDY29_RS25700 (48315) | 48315..48998 | + | 684 | WP_000213863.1 | hypothetical protein | - |
| QDY29_RS25705 (49170) | 49170..49424 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDY29_RS25710 (50471) | 50471..51538 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| QDY29_RS25715 (51538) | 51538..51975 | + | 438 | WP_000539806.1 | hypothetical protein | VF |
| QDY29_RS25720 (51989) | 51989..53671 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDY29_RS25725 (53664) | 53664..54959 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| QDY29_RS25730 (54946) | 54946..55398 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| QDY29_RS25735 (55409) | 55409..56962 | + | 1554 | WP_000362206.1 | hypothetical protein | VF |
| QDY29_RS25740 (56975) | 56975..58060 | + | 1086 | WP_001208802.1 | hypothetical protein | VF |
| QDY29_RS25745 (58077) | 58077..58691 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| QDY29_RS25750 (58701) | 58701..59261 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| QDY29_RS25755 (59246) | 59246..59902 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| QDY29_RS25760 (59902) | 59902..61251 | + | 1350 | WP_282843039.1 | hypothetical protein | VF |
| QDY29_RS25765 (62960) | 62960..64114 | + | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDY29_RS25770 (64265) | 64265..65089 | + | 825 | WP_001582597.1 | conjugal transfer protein TraE | - |
| QDY29_RS25775 (65174) | 65174..66376 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDY29_RS25780 (66436) | 66436..67020 | + | 585 | WP_016231299.1 | histidine phosphatase family protein | - |
| QDY29_RS25785 (67415) | 67415..67873 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDY29_RS25790 (67870) | 67870..68688 | + | 819 | WP_000866663.1 | hypothetical protein | VF |
| QDY29_RS25795 (68685) | 68685..69833 | + | 1149 | WP_001024972.1 | hypothetical protein | VF |
| QDY29_RS25800 (69830) | 69830..70120 | + | 291 | WP_072107178.1 | conjugal transfer protein | - |
| QDY29_RS25805 (70135) | 70135..70686 | + | 552 | WP_000014584.1 | Cardiolipin synthase A | VF |
| QDY29_RS25810 (70776) | 70776..74543 | + | 3768 | WP_112477715.1 | DUF5710 domain-containing protein | - |
| QDY29_RS25815 (74561) | 74561..74908 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDY29_RS25820 (74905) | 74905..75597 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QDY29_RS25825 (75608) | 75608..75799 | + | 192 | Protein_86 | conjugal transfer protein TraN | - |
| QDY29_RS25830 (75855) | 75855..77068 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| QDY29_RS25835 (77113) | 77113..77904 | + | 792 | Protein_88 | hypothetical protein | VF |
| QDY29_RS25840 (77907) | 77907..79196 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| QDY29_RS25845 (79196) | 79196..79900 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDY29_RS25850 (79900) | 79900..80427 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDY29_RS25855 (80478) | 80478..80882 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QDY29_RS25860 (80946) | 80946..81134 | + | 189 | WP_052896789.1 | putative conjugal transfer protein TraS | - |
| QDY29_RS25865 (81118) | 81118..81918 | + | 801 | WP_052896786.1 | IncI1-type conjugal transfer protein TraT | - |
| QDY29_RS25870 (82008) | 82008..85052 | + | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QDY29_RS25875 (85052) | 85052..85666 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDY29_RS25880 (85633) | 85633..86835 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QDY29_RS25885 (86864) | 86864..87448 | + | 585 | WP_052896781.1 | IncI1-type conjugal transfer protein TraX | - |
| QDY29_RS25890 (87545) | 87545..89712 | + | 2168 | Protein_99 | DotA/TraY family protein | - |
| QDY29_RS25895 (89783) | 89783..90445 | + | 663 | WP_012783935.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDY29_RS25900 (90517) | 90517..90726 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|