MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 90361 bp
Accession: NZ_CP122809 Location: 1..90361 Organism: Escherichia coli strain ETEC1734 Replicon: plasmid unnamed8
Accession: NZ_CP122809 Location: 1..90361 Organism: Escherichia coli strain ETEC1734 Replicon: plasmid unnamed8
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX84_RS28085 (QDX84_28085) | 1..390 | + | 390 | WP_022630896.1 | S24 family peptidase | - |
| QDX84_RS28090 (QDX84_28090) | 525..947 | + | 423 | WP_000098854.1 | hypothetical protein | - |
| QDX84_RS28095 (QDX84_28095) | 1056..1277 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDX84_RS28100 (QDX84_28100) | 1277..1657 | + | 381 | WP_001216038.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| QDX84_RS28105 (QDX84_28105) | 1662..1859 | + | 198 | WP_000113017.1 | hypothetical protein | - |
| QDX84_RS28110 (QDX84_28110) | 1892..2668 | - | 777 | WP_282835463.1 | hypothetical protein | - |
| QDX84_RS28115 (QDX84_28115) | 2675..3352 | - | 678 | WP_001061873.1 | DUF2829 domain-containing protein | - |
| QDX84_RS28120 (QDX84_28120) | 3367..3861 | - | 495 | WP_074525592.1 | dUTP diphosphatase | - |
| QDX84_RS28125 (QDX84_28125) | 3858..4322 | - | 465 | WP_282835462.1 | hypothetical protein | - |
| QDX84_RS28130 (QDX84_28130) | 4319..4663 | - | 345 | WP_001191776.1 | hypothetical protein | - |
| QDX84_RS28135 (QDX84_28135) | 4737..5765 | - | 1029 | WP_001292231.1 | tyrosine-type recombinase/integrase | - |
| QDX84_RS28140 (QDX84_28140) | 6160..7197 | + | 1038 | WP_000039384.1 | hypothetical protein | - |
| QDX84_RS28145 (QDX84_28145) | 7225..8733 | - | 1509 | WP_000897062.1 | terminase | - |
| QDX84_RS28150 (QDX84_28150) | 8733..10097 | - | 1365 | WP_236475056.1 | DNA pacase A subunit | - |
| QDX84_RS28155 (QDX84_28155) | 10094..10486 | - | 393 | WP_000435256.1 | hypothetical protein | - |
| QDX84_RS28160 (QDX84_28160) | 10595..10837 | - | 243 | WP_223720121.1 | hypothetical protein | - |
| QDX84_RS28165 (QDX84_28165) | 10987..11562 | - | 576 | WP_000928280.1 | hypothetical protein | - |
| QDX84_RS28175 (QDX84_28175) | 12212..12376 | - | 165 | WP_000579539.1 | DUF3927 family protein | - |
| QDX84_RS28180 (QDX84_28180) | 12376..12810 | - | 435 | WP_000467090.1 | TerB family tellurite resistance protein | - |
| QDX84_RS28205 (QDX84_28205) | 15102..16310 | - | 1209 | WP_000077919.1 | hypothetical protein | - |
| QDX84_RS28210 (QDX84_28210) | 16935..17243 | - | 309 | WP_282871447.1 | VRR-NUC domain-containing protein | - |
| QDX84_RS28215 (QDX84_28215) | 17566..17826 | - | 261 | WP_001230915.1 | hypothetical protein | - |
| QDX84_RS28220 (QDX84_28220) | 17829..18263 | - | 435 | WP_000209223.1 | hypothetical protein | - |
| QDX84_RS28225 (QDX84_28225) | 18300..25136 | - | 6837 | WP_282835461.1 | SNF2-related protein | - |
| QDX84_RS28230 (QDX84_28230) | 25288..25773 | + | 486 | WP_032342275.1 | TIGR02594 family protein | - |
| QDX84_RS28235 (QDX84_28235) | 25806..26003 | - | 198 | WP_032342276.1 | hypothetical protein | - |
| QDX84_RS28240 (QDX84_28240) | 26003..26710 | - | 708 | WP_047647000.1 | Rha family transcriptional regulator | - |
| QDX84_RS28245 (QDX84_28245) | 26710..26934 | - | 225 | WP_000245715.1 | host cell division inhibitor Icd-like protein | - |
| QDX84_RS28250 (QDX84_28250) | 27351..28310 | - | 960 | WP_282835460.1 | lytic replication protein | - |
| QDX84_RS28255 (QDX84_28255) | 28511..29509 | - | 999 | WP_001191132.1 | hypothetical protein | - |
| QDX84_RS28260 (QDX84_28260) | 29523..31205 | - | 1683 | WP_000201469.1 | portal protein | - |
| QDX84_RS28265 (QDX84_28265) | 31270..32655 | - | 1386 | WP_063074799.1 | hypothetical protein | - |
| QDX84_RS28270 (QDX84_28270) | 32750..33124 | - | 375 | WP_000156171.1 | hypothetical protein | - |
| QDX84_RS28275 (QDX84_28275) | 33124..35055 | - | 1932 | WP_282871443.1 | head protein | - |
| QDX84_RS28280 (QDX84_28280) | 35048..35668 | - | 621 | WP_000066534.1 | hypothetical protein | - |
| QDX84_RS28285 (QDX84_28285) | 35658..36104 | - | 447 | WP_000526264.1 | hypothetical protein | - |
| QDX84_RS28290 (QDX84_28290) | 36104..36430 | - | 327 | WP_000457140.1 | holin | - |
| QDX84_RS28295 (QDX84_28295) | 36536..37096 | + | 561 | WP_000904921.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QDX84_RS28300 (QDX84_28300) | 37144..39624 | + | 2481 | WP_282871445.1 | phage tail protein | - |
| QDX84_RS28305 (QDX84_28305) | 39639..40154 | + | 516 | WP_069907397.1 | tail fiber assembly protein | - |
| QDX84_RS28310 (QDX84_28310) | 40194..40739 | - | 546 | WP_097455962.1 | tail fiber assembly protein | - |
| QDX84_RS28315 (QDX84_28315) | 40758..43208 | - | 2451 | WP_282871446.1 | hypothetical protein | - |
| QDX84_RS28320 (QDX84_28320) | 43282..43554 | + | 273 | WP_000019163.1 | hypothetical protein | - |
| QDX84_RS28325 (QDX84_28325) | 43535..44743 | + | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| QDX84_RS28330 (QDX84_28330) | 44907..45098 | - | 192 | WP_282835456.1 | hypothetical protein | - |
| QDX84_RS28335 (QDX84_28335) | 45487..46242 | + | 756 | WP_196046810.1 | RepB family plasmid replication initiator protein | - |
| QDX84_RS28340 (QDX84_28340) | 47002..47217 | + | 216 | WP_023908691.1 | host cell division inhibitor Icd-like protein | - |
| QDX84_RS28345 (QDX84_28345) | 47217..47927 | + | 711 | Protein_47 | Rha family transcriptional regulator | - |
| QDX84_RS28350 (QDX84_28350) | 48189..48896 | - | 708 | WP_097747653.1 | phage tail protein | - |
| QDX84_RS28355 (QDX84_28355) | 48912..49463 | - | 552 | WP_196046808.1 | hypothetical protein | - |
| QDX84_RS28360 (QDX84_28360) | 49518..50009 | - | 492 | WP_085438004.1 | baseplate protein | - |
| QDX84_RS28365 (QDX84_28365) | 50018..50566 | - | 549 | WP_000870304.1 | hypothetical protein | - |
| QDX84_RS28370 (QDX84_28370) | 50658..51392 | - | 735 | WP_023908653.1 | hypothetical protein | - |
| QDX84_RS28375 (QDX84_28375) | 51436..53094 | - | 1659 | WP_001033852.1 | tail sheath protein | - |
| QDX84_RS28380 (QDX84_28380) | 53390..54598 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| QDX84_RS28385 (QDX84_28385) | 54579..54851 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| QDX84_RS28390 (QDX84_28390) | 54884..55153 | - | 270 | WP_282835471.1 | Ig-like domain-containing protein | - |
| QDX84_RS28395 (QDX84_28395) | 55264..56997 | - | 1734 | WP_282835470.1 | capsid protein | - |
| QDX84_RS28400 (QDX84_28400) | 57156..57548 | + | 393 | WP_000331486.1 | hypothetical protein | - |
| QDX84_RS28405 (QDX84_28405) | 57565..58023 | + | 459 | WP_000020025.1 | hypothetical protein | - |
| QDX84_RS28410 (QDX84_28410) | 58177..58668 | - | 492 | WP_000483458.1 | hypothetical protein | - |
| QDX84_RS28415 (QDX84_28415) | 58708..59511 | - | 804 | WP_097432516.1 | hypothetical protein | - |
| QDX84_RS28420 (QDX84_28420) | 59511..59795 | - | 285 | WP_001272821.1 | PAAR domain-containing protein | - |
| QDX84_RS28425 (QDX84_28425) | 60062..61018 | + | 957 | WP_032284705.1 | plasmid segregation protein ParM | - |
| QDX84_RS28430 (QDX84_28430) | 61032..61370 | + | 339 | WP_000076909.1 | plasmid partitioning/stability family protein | - |
| QDX84_RS28435 (QDX84_28435) | 61658..62299 | + | 642 | WP_016262372.1 | Iron-sulfur cluster carrier protein | VF |
| QDX84_RS28440 (QDX84_28440) | 62292..62579 | + | 288 | WP_032284706.1 | hypothetical protein | - |
| QDX84_RS28445 (QDX84_28445) | 62793..64454 | + | 1662 | WP_032342063.1 | glutamine--tRNA ligase | - |
| QDX84_RS28450 (QDX84_28450) | 64503..65321 | - | 819 | Protein_68 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| QDX84_RS28455 (QDX84_28455) | 65401..66021 | - | 621 | WP_044862276.1 | hypothetical protein | - |
| QDX84_RS28460 (QDX84_28460) | 66065..66970 | - | 906 | WP_282835469.1 | recombination-associated protein RdgC | - |
| QDX84_RS28465 (QDX84_28465) | 67030..67635 | - | 606 | WP_223699645.1 | carbohydrate-binding domain-containing protein | - |
| QDX84_RS28470 (QDX84_28470) | 67680..68660 | - | 981 | WP_000046499.1 | hypothetical protein | - |
| QDX84_RS28475 (QDX84_28475) | 68664..69431 | - | 768 | WP_000203290.1 | hypothetical protein | - |
| QDX84_RS28480 (QDX84_28480) | 69428..70219 | - | 792 | WP_000532305.1 | hypothetical protein | - |
| QDX84_RS28485 (QDX84_28485) | 70382..70684 | + | 303 | WP_000162415.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDX84_RS28490 (QDX84_28490) | 70755..71093 | + | 339 | WP_000806445.1 | HigA family addiction module antitoxin | Antitoxin Detail |
| QDX84_RS28495 (QDX84_28495) | 71150..71335 | + | 186 | Protein_77 | hypothetical protein | - |
| QDX84_RS28500 (QDX84_28500) | 71372..72100 | + | 729 | WP_000986754.1 | hypothetical protein | - |
| QDX84_RS28505 (QDX84_28505) | 72134..73327 | - | 1194 | WP_001112633.1 | hypothetical protein | - |
| QDX84_RS28510 (QDX84_28510) | 73320..73649 | - | 330 | WP_000542383.1 | hypothetical protein | - |
| QDX84_RS28515 (QDX84_28515) | 73978..74631 | - | 654 | WP_000410952.1 | hypothetical protein | - |
| QDX84_RS28520 (QDX84_28520) | 74915..75523 | + | 609 | WP_282835468.1 | hypothetical protein | - |
| QDX84_RS28525 (QDX84_28525) | 75544..75936 | + | 393 | WP_000824758.1 | hypothetical protein | - |
| QDX84_RS28530 (QDX84_28530) | 76025..76642 | - | 618 | WP_001050887.1 | dCTP deaminase | - |
| QDX84_RS28535 (QDX84_28535) | 76639..77712 | - | 1074 | WP_000879262.1 | hypothetical protein | - |
| QDX84_RS28540 (QDX84_28540) | 77712..78017 | - | 306 | WP_000964983.1 | hypothetical protein | - |
| QDX84_RS28545 (QDX84_28545) | 78344..78631 | - | 288 | WP_001557717.1 | hypothetical protein | - |
| QDX84_RS28550 (QDX84_28550) | 78922..79632 | - | 711 | Protein_88 | Rha family transcriptional regulator | - |
| QDX84_RS28555 (QDX84_28555) | 79632..79847 | - | 216 | WP_022630900.1 | host cell division inhibitor Icd-like protein | - |
| QDX84_RS28560 (QDX84_28560) | 79866..79985 | - | 120 | WP_001396852.1 | ash family protein | - |
| QDX84_RS28565 (QDX84_28565) | 80160..80327 | - | 168 | WP_000218500.1 | hypothetical protein | - |
| QDX84_RS28570 (QDX84_28570) | 80660..81238 | - | 579 | WP_087503500.1 | Ref family recombination enhancement nuclease | - |
| QDX84_RS28575 (QDX84_28575) | 81511..82134 | + | 624 | WP_000240859.1 | DUF4406 domain-containing protein | - |
| QDX84_RS28580 (QDX84_28580) | 82191..82448 | + | 258 | WP_282835467.1 | DNA-binding protein | - |
| QDX84_RS28585 (QDX84_28585) | 82438..82800 | + | 363 | WP_282835466.1 | ClpX C4-type zinc finger protein | - |
| QDX84_RS28590 (QDX84_28590) | 82797..83489 | + | 693 | WP_282835465.1 | hypothetical protein | - |
| QDX84_RS28595 (QDX84_28595) | 83486..83761 | + | 276 | WP_122791605.1 | DUF4752 family protein | - |
| QDX84_RS28600 (QDX84_28600) | 83758..83982 | + | 225 | WP_000139733.1 | hypothetical protein | - |
| QDX84_RS28605 (QDX84_28605) | 83979..84290 | + | 312 | WP_001092152.1 | hypothetical protein | - |
| QDX84_RS28610 (QDX84_28610) | 84287..84979 | + | 693 | WP_096854245.1 | metallophosphoesterase | - |
| QDX84_RS28615 (QDX84_28615) | 85119..86072 | + | 954 | WP_240088976.1 | DUF968 domain-containing protein | - |
| QDX84_RS28620 (QDX84_28620) | 86089..86778 | + | 690 | WP_097455806.1 | hypothetical protein | - |
| QDX84_RS28625 (QDX84_28625) | 86765..87463 | + | 699 | WP_119799329.1 | ead/Ea22-like family protein | - |
| QDX84_RS28630 (QDX84_28630) | 87460..88143 | + | 684 | WP_282835464.1 | ead/Ea22-like family protein | - |
| QDX84_RS28635 (QDX84_28635) | 88496..88621 | + | 126 | Protein_105 | hypothetical protein | - |
| QDX84_RS28640 (QDX84_28640) | 88694..89578 | + | 885 | WP_236419076.1 | hypothetical protein | - |
| QDX84_RS28645 (QDX84_28645) | 89562..89714 | + | 153 | WP_022630897.1 | hypothetical protein | - |
| QDX84_RS28650 (QDX84_28650) | 89821..90171 | - | 351 | WP_001436207.1 | hypothetical protein | - |
| QDX84_RS28655 (QDX84_28655) | 90204..90302 | + | 99 | Protein_109 | DNA polymerase III subunit theta | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|