MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 76285 bp
Accession: NZ_CP122772 Location: 1..76285 Organism: Escherichia coli strain ETEC1738 Replicon: plasmid unnamed4
Accession: NZ_CP122772 Location: 1..76285 Organism: Escherichia coli strain ETEC1738 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDY55_RS29865 (QDY55_29860) | 70..1254 | + | 1185 | WP_238014230.1 | hypothetical protein | - |
| QDY55_RS29870 (QDY55_29865) | 1251..1715 | + | 465 | WP_000206177.1 | type-F conjugative transfer system protein TrbI | - |
| QDY55_RS29875 (QDY55_29870) | 1715..2350 | + | 636 | WP_096216113.1 | type-F conjugative transfer system protein TraW | - |
| QDY55_RS29880 (QDY55_29875) | 2347..3333 | + | 987 | WP_001083236.1 | conjugal transfer pilus assembly protein TraU | - |
| QDY55_RS29885 (QDY55_29880) | 3344..3712 | + | 369 | WP_000961329.1 | hypothetical protein | - |
| QDY55_RS29890 (QDY55_29885) | 3709..4389 | + | 681 | WP_282870975.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDY55_RS29895 (QDY55_29890) | 4319..6157 | + | 1839 | WP_236523446.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDY55_RS29900 (QDY55_29895) | 6154..6933 | + | 780 | WP_032222760.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDY55_RS29905 (QDY55_29900) | 6957..7559 | + | 603 | WP_000906493.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDY55_RS29910 (QDY55_29905) | 7565..8926 | + | 1362 | WP_001726833.1 | conjugal transfer pilus assembly protein TraH | - |
| QDY55_RS29915 (QDY55_29910) | 8928..11810 | + | 2883 | WP_000963403.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDY55_RS29920 (QDY55_29915) | 11820..12392 | + | 573 | WP_282870981.1 | conjugal transfer protein TraS | - |
| QDY55_RS29925 (QDY55_29920) | 12560..13297 | + | 738 | WP_000812365.1 | conjugal transfer complement resistance protein TraT | - |
| QDY55_RS29930 (QDY55_29925) | 13439..15688 | + | 2250 | WP_096221589.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDY55_RS29935 (QDY55_29930) | 15688..20982 | + | 5295 | WP_096216115.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDY55_RS29940 (QDY55_29935) | 21000..21566 | + | 567 | WP_012000724.1 | DUF2726 domain-containing protein | - |
| QDY55_RS29945 (QDY55_29940) | 21563..22294 | + | 732 | WP_024184882.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| QDY55_RS29950 (QDY55_29945) | 22484..22768 | + | 285 | WP_096216116.1 | hypothetical protein | - |
| QDY55_RS29955 (QDY55_29950) | 22874..23869 | + | 996 | WP_000118344.1 | hypothetical protein | - |
| QDY55_RS29960 (QDY55_29955) | 23940..24068 | + | 129 | Protein_20 | Hok/Gef family protein | - |
| QDY55_RS29965 (QDY55_29960) | 24313..24573 | + | 261 | WP_005768671.1 | replication regulatory protein RepA | - |
| QDY55_RS29970 (QDY55_29965) | 24801..24875 | + | 75 | WP_064716759.1 | RepA leader peptide Tap | - |
| QDY55_RS29975 (QDY55_29970) | 24868..25890 | + | 1023 | WP_047628493.1 | plasmid replication initiator RepA | - |
| QDY55_RS29980 (QDY55_29975) | 26805..27089 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDY55_RS29985 (QDY55_29980) | 27089..27364 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY55_RS29990 (QDY55_29985) | 27648..28835 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY55_RS29995 (QDY55_29990) | 28835..29200 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY55_RS30000 (QDY55_29995) | 29623..30096 | - | 474 | WP_001122138.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| QDY55_RS30005 (QDY55_30000) | 30886..30981 | - | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| QDY55_RS30010 (QDY55_30005) | 31434..31856 | - | 423 | WP_001398192.1 | hypothetical protein | - |
| QDY55_RS30015 (QDY55_30010) | 32028..32291 | - | 264 | WP_000063165.1 | hypothetical protein | - |
| QDY55_RS30020 (QDY55_30015) | 32430..33842 | - | 1413 | Protein_32 | DNA topoisomerase | - |
| QDY55_RS30025 (QDY55_30020) | 33924..34289 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY55_RS30030 (QDY55_30025) | 34289..35476 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY55_RS30035 (QDY55_30030) | 35866..36081 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| QDY55_RS30040 (QDY55_30035) | 36071..36316 | - | 246 | WP_000356545.1 | hypothetical protein | - |
| QDY55_RS30045 (QDY55_30040) | 36361..36684 | - | 324 | WP_001181907.1 | hypothetical protein | - |
| QDY55_RS30050 (QDY55_30045) | 36830..37111 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDY55_RS30055 (QDY55_30050) | 37101..37352 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| QDY55_RS30060 (QDY55_30055) | 38586..39422 | + | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| QDY55_RS30065 (QDY55_30060) | 39462..39908 | + | 447 | WP_000057426.1 | hypothetical protein | - |
| QDY55_RS30070 (QDY55_30065) | 40045..40401 | + | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| QDY55_RS30075 (QDY55_30070) | 40398..41375 | - | 978 | WP_001269910.1 | hypothetical protein | - |
| QDY55_RS30080 (QDY55_30075) | 41400..41681 | - | 282 | WP_001185482.1 | hypothetical protein | - |
| QDY55_RS30085 (QDY55_30080) | 41779..42441 | - | 663 | WP_000516400.1 | division plane positioning ATPase MipZ | - |
| QDY55_RS30090 (QDY55_30085) | 42822..43466 | + | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QDY55_RS30095 (QDY55_30090) | 43621..43704 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| QDY55_RS30100 (QDY55_30095) | 44490..45677 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY55_RS30105 (QDY55_30100) | 45677..46042 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY55_RS30110 (QDY55_30105) | 46127..46321 | + | 195 | Protein_50 | carbohydrate transporter | - |
| QDY55_RS30115 (QDY55_30110) | 46337..46507 | + | 171 | WP_162779668.1 | hypothetical protein | - |
| QDY55_RS30120 (QDY55_30115) | 46538..47117 | + | 580 | Protein_52 | transposase | - |
| QDY55_RS30125 (QDY55_30120) | 47737..48252 | + | 516 | WP_282870970.1 | Major MR/P fimbria protein | VF |
| QDY55_RS30130 (QDY55_30125) | 48345..50759 | + | 2415 | WP_000747724.1 | Outer membrane usher protein YraJ | VF |
| QDY55_RS30135 (QDY55_30130) | 50752..51444 | + | 693 | WP_001037287.1 | Chaperone protein FaeE | VF |
| QDY55_RS30140 (QDY55_30135) | 51407..51946 | + | 540 | WP_172692311.1 | F18 fimbrial subunit FedE | - |
| QDY55_RS30145 (QDY55_30140) | 52244..53146 | + | 903 | WP_236265428.1 | F18 fimbrial adhesin subunit FedF | - |
| QDY55_RS30150 (QDY55_30145) | 53327..53694 | + | 368 | Protein_58 | IS3 family transposase | - |
| QDY55_RS30155 (QDY55_30150) | 54163..54978 | - | 816 | WP_000941741.1 | Multiple antibiotic resistance protein MarA | VF |
| QDY55_RS30160 (QDY55_30155) | 55484..55714 | + | 231 | WP_219789736.1 | hypothetical protein | - |
| QDY55_RS30165 (QDY55_30160) | 55934..56440 | - | 507 | WP_000939423.1 | thiol peroxidase | - |
| QDY55_RS30170 (QDY55_30165) | 56660..57220 | - | 561 | Protein_62 | IS91 family transposase IS91 | Transposase |
| QDY55_RS30175 (QDY55_30170) | 57811..58152 | - | 342 | Protein_63 | IS3 family transposase | - |
| QDY55_RS30180 (QDY55_30175) | 58230..59666 | - | 1437 | WP_000860467.1 | Hemolysin secretion protein D, plasmid | VF |
| QDY55_RS30185 (QDY55_30180) | 59685..61808 | - | 2124 | WP_282857811.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QDY55_RS30190 (QDY55_30185) | 61880..64954 | - | 3075 | WP_039022831.1 | Hemolysin, plasmid | VF |
| QDY55_RS30195 (QDY55_30190) | 64966..65478 | - | 513 | WP_001372478.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| QDY55_RS30200 (QDY55_30195) | 65961..67189 | - | 1229 | Protein_68 | IS3 family transposase | - |
| QDY55_RS30210 (QDY55_30205) | 69088..70275 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDY55_RS30215 (QDY55_30210) | 70275..70640 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDY55_RS30220 (QDY55_30215) | 70917..72104 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDY55_RS30225 (QDY55_30220) | 72104..72469 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDY55_RS30230 (QDY55_30225) | 72488..73897 | + | 1410 | WP_282870972.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDY55_RS30235 (QDY55_30230) | 74009..74233 | + | 225 | WP_000786057.1 | TraR/DksA C4-type zinc finger protein | - |
| QDY55_RS30240 (QDY55_30235) | 74339..74938 | + | 600 | WP_001046445.1 | type IV conjugative transfer system lipoprotein TraV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|