MGE detailed information
MGE type: Conjugative plasmid MGE length: 83893 bp
Accession: NZ_CP122657 Location: 1..83893 Organism: Escherichia coli strain ETEC4074 Replicon: plasmid unnamed2
Accession: NZ_CP122657 Location: 1..83893 Organism: Escherichia coli strain ETEC4074 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW60_RS24770 (1498) | 1498..1932 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| QDW60_RS24775 (1929) | 1929..2691 | + | 763 | Protein_2 | plasmid SOS inhibition protein A | - |
| QDW60_RS24780 (2660) | 2660..2848 | - | 189 | WP_032084246.1 | hypothetical protein | - |
| - (2660) | 2660..2884 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (2660) | 2660..2884 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (2660) | 2660..2884 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (2660) | 2660..2884 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| QDW60_RS24785 (2870) | 2870..3019 | + | 150 | Protein_4 | plasmid maintenance protein Mok | - |
| QDW60_RS24790 (2961) | 2961..3086 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QDW60_RS24795 (3306) | 3306..3536 | + | 231 | WP_074014914.1 | hypothetical protein | - |
| QDW60_RS24800 (3534) | 3534..3707 | - | 174 | Protein_7 | hypothetical protein | - |
| QDW60_RS24805 (3777) | 3777..3983 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| QDW60_RS24810 (4008) | 4008..4294 | + | 287 | Protein_9 | hypothetical protein | - |
| QDW60_RS24815 (4413) | 4413..5234 | + | 822 | WP_074014913.1 | DUF932 domain-containing protein | - |
| QDW60_RS24820 (5531) | 5531..6178 | - | 648 | WP_282953962.1 | hypothetical protein | VF |
| QDW60_RS24825 (6455) | 6455..6838 | + | 384 | WP_040073112.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDW60_RS24830 (7028) | 7028..7714 | + | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| QDW60_RS24835 (7808) | 7808..8035 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| QDW60_RS24840 (8069) | 8069..8434 | + | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| QDW60_RS24845 (8449) | 8449..8760 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QDW60_RS24850 (8782) | 8782..9348 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QDW60_RS24855 (9335) | 9335..10063 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| QDW60_RS24860 (10063) | 10063..11490 | + | 1428 | WP_000146685.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDW60_RS24865 (11480) | 11480..12070 | + | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QDW60_RS24870 (12063) | 12063..12254 | + | 192 | WP_032072783.1 | conjugal transfer protein TrbD | - |
| QDW60_RS24875 (12266) | 12266..12516 | + | 251 | Protein_22 | conjugal transfer protein TrbG | - |
| QDW60_RS24880 (12513) | 12513..13028 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDW60_RS24885 (13163) | 13163..13384 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| QDW60_RS24890 (13544) | 13544..16171 | + | 2628 | WP_282953963.1 | type IV secretion system protein TraC | - |
| QDW60_RS24895 (16168) | 16168..16554 | + | 387 | WP_032082946.1 | type-F conjugative transfer system protein TrbI | - |
| QDW60_RS24900 (16551) | 16551..17183 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| QDW60_RS24905 (17180) | 17180..18172 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| QDW60_RS24910 (18181) | 18181..18819 | + | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDW60_RS24915 (18816) | 18816..20624 | + | 1809 | WP_032082947.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDW60_RS24920 (20651) | 20651..20908 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| QDW60_RS24925 (20901) | 20901..21644 | + | 744 | WP_135460420.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDW60_RS24930 (21660) | 21660..22007 | + | 348 | WP_032082949.1 | conjugal transfer protein TrbA | - |
| QDW60_RS24935 (22009) | 22009..22284 | - | 276 | WP_074430089.1 | toxin ArtA | - |
| QDW60_RS24940 (22365) | 22365..22649 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QDW60_RS24945 (22636) | 22636..23181 | + | 546 | WP_032082911.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDW60_RS24950 (23111) | 23111..23452 | + | 342 | WP_001442101.1 | P-type conjugative transfer protein TrbJ | - |
| QDW60_RS24955 (23439) | 23439..23831 | + | 393 | WP_032082924.1 | F-type conjugal transfer protein TrbF | - |
| QDW60_RS24960 (23818) | 23818..25191 | + | 1374 | WP_000944319.1 | conjugal transfer pilus assembly protein TraH | - |
| QDW60_RS24965 (25188) | 25188..28013 | + | 2826 | WP_062873763.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDW60_RS24970 (28010) | 28010..28519 | + | 510 | WP_032082913.1 | conjugal transfer entry exclusion protein TraS | - |
| QDW60_RS24975 (28533) | 28533..29264 | + | 732 | WP_024187508.1 | conjugal transfer complement resistance protein TraT | - |
| QDW60_RS24980 (29516) | 29516..31669 | + | 2154 | WP_062873762.1 | type IV conjugative transfer system coupling protein TraD | - |
| QDW60_RS24985 (31678) | 31678..32076 | - | 399 | WP_000911317.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QDW60_RS24990 (32076) | 32076..32303 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QDW60_RS24995 (32385) | 32385..37655 | + | 5271 | WP_096136349.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDW60_RS25000 (37675) | 37675..38421 | + | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| QDW60_RS25005 (38480) | 38480..39340 | + | 861 | WP_000704522.1 | Quorum-quenching protein AidA | VF |
| QDW60_RS25010 (39443) | 39443..40003 | + | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| QDW60_RS25015 (40136) | 40136..40294 | + | 159 | WP_021545194.1 | hypothetical protein | - |
| QDW60_RS25020 (40593) | 40593..41054 | + | 462 | WP_021545193.1 | thermonuclease family protein | - |
| QDW60_RS25025 (41100) | 41100..41309 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| QDW60_RS25030 (41347) | 41347..41937 | + | 591 | WP_032082916.1 | DUF2726 domain-containing protein | - |
| QDW60_RS25035 (42177) | 42177..42434 | + | 258 | WP_032082917.1 | replication regulatory protein RepA | - |
| QDW60_RS25040 (42668) | 42668..42742 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| QDW60_RS25045 (42735) | 42735..43592 | + | 858 | WP_001401515.1 | incFII family plasmid replication initiator RepA | - |
| QDW60_RS25050 (44513) | 44513..45214 | - | 702 | WP_282953960.1 | hypothetical protein | - |
| QDW60_RS25055 (45666) | 45666..46853 | - | 1188 | WP_042634447.1 | IS91 family transposase ISEc37 | Transposase |
| QDW60_RS25060 (46853) | 46853..47218 | - | 366 | WP_000124135.1 | hypothetical protein | - |
| QDW60_RS25065 (47253) | 47253..47711 | - | 459 | Protein_60 | transposase | - |
| QDW60_RS25070 (47789) | 47789..47938 | - | 150 | Protein_61 | IS3 family transposase ISKpn37 | Transposase |
| QDW60_RS25075 (48446) | 48446..48664 | + | 219 | WP_001353651.1 | Heat-stable enterotoxin ST-IA/ST-P | VF |
| QDW60_RS25080 (48958) | 48958..49374 | + | 417 | Protein_63 | IS66 family transposase ISCro1 | Transposase |
| QDW60_RS25085 (49446) | 49446..50243 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| QDW60_RS25090 (50243) | 50243..51415 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| QDW60_RS25095 (51518) | 51518..51712 | - | 195 | Protein_66 | IS3 family transposase ISKpn37 | Transposase |
| QDW60_RS25100 (51784) | 51784..51891 | - | 108 | Protein_67 | IS3 family transposase IS1351 | Transposase |
| QDW60_RS25105 (52506) | 52506..53042 | + | 537 | WP_241363800.1 | hypothetical protein | - |
| QDW60_RS25110 (53321) | 53321..53575 | + | 255 | WP_231245300.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QDW60_RS25115 (53710) | 53710..54225 | + | 516 | WP_062873941.1 | hypothetical protein | VF |
| QDW60_RS25120 (54340) | 54340..56754 | + | 2415 | WP_062873940.1 | Outer membrane usher protein FimD | VF |
| QDW60_RS25125 (56747) | 56747..57439 | + | 693 | WP_062873939.1 | Chaperone protein FaeE | VF |
| QDW60_RS25130 (57504) | 57504..57935 | + | 432 | WP_282953961.1 | F18 fimbrial protein FedE | - |
| QDW60_RS25135 (58086) | 58086..58928 | + | 843 | WP_062873937.1 | hypothetical protein | - |
| QDW60_RS25140 (58995) | 58995..59120 | - | 126 | Protein_75 | IS256 family transposase | - |
| QDW60_RS25145 (59192) | 59192..59272 | - | 81 | Protein_76 | ATP-binding protein | - |
| QDW60_RS25150 (59357) | 59357..59641 | + | 285 | WP_032084130.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDW60_RS25155 (59641) | 59641..59916 | + | 276 | WP_032084131.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW60_RS25160 (60022) | 60022..60225 | + | 204 | Protein_79 | hypothetical protein | - |
| QDW60_RS25165 (60572) | 60572..60918 | + | 347 | Protein_80 | DUF6404 family protein | - |
| QDW60_RS25170 (60936) | 60936..61370 | - | 435 | Protein_81 | hypothetical protein | - |
| QDW60_RS25175 (61654) | 61654..62577 | - | 924 | WP_032084040.1 | hypothetical protein | - |
| QDW60_RS25180 (63621) | 63621..63824 | + | 204 | Protein_83 | integrase core domain-containing protein | - |
| QDW60_RS25185 (64750) | 64750..65163 | + | 414 | WP_000465045.1 | hypothetical protein | - |
| QDW60_RS25190 (65165) | 65165..65947 | + | 783 | WP_001164199.1 | site-specific integrase | - |
| QDW60_RS25195 (66120) | 66120..66473 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| QDW60_RS25200 (66523) | 66523..67338 | - | 816 | WP_032084023.1 | lipid II-degrading bacteriocin colicin M | - |
| QDW60_RS25205 (67582) | 67582..68109 | + | 528 | WP_032084022.1 | colicin B immunity protein | - |
| QDW60_RS25210 (68127) | 68127..69227 | - | 1101 | Protein_89 | pore-forming bacteriocin colicin B | - |
| QDW60_RS25215 (69286) | 69286..70083 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| QDW60_RS25220 (70083) | 70083..71255 | - | 1173 | WP_015056461.1 | IS21 family transposase IS21 | Transposase |
| QDW60_RS25225 (71357) | 71357..71797 | - | 441 | Protein_92 | colicin-like bacteriocin tRNase domain-containing protein | - |
| QDW60_RS25230 (72238) | 72238..72750 | + | 513 | WP_001027529.1 | hypothetical protein | - |
| QDW60_RS25235 (72901) | 72901..73251 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| QDW60_RS25240 (73254) | 73254..74216 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| QDW60_RS25245 (74364) | 74364..74657 | + | 294 | WP_032084025.1 | hypothetical protein | - |
| QDW60_RS25250 (74734) | 74734..75417 | + | 684 | WP_000085940.1 | DNA methylase | - |
| QDW60_RS25255 (75418) | 75418..75639 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QDW60_RS25260 (75569) | 75569..76087 | + | 519 | WP_231240224.1 | DUF1380 family protein | - |
| QDW60_RS25265 (76132) | 76132..76902 | + | 771 | WP_001006199.1 | hypothetical protein | - |
| QDW60_RS25270 (77319) | 77319..77744 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QDW60_RS25275 (77791) | 77791..78213 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QDW60_RS25280 (78210) | 78210..78401 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QDW60_RS25285 (78615) | 78615..78770 | + | 156 | WP_001744062.1 | hypothetical protein | - |
| QDW60_RS25290 (79436) | 79436..79666 | + | 231 | WP_033566681.1 | hypothetical protein | - |
| QDW60_RS25295 (79718) | 79718..81079 | + | 1362 | Protein_106 | DUF3560 domain-containing protein | - |
| QDW60_RS25300 (81127) | 81127..81690 | + | 564 | WP_042111888.1 | class I SAM-dependent methyltransferase | - |
| QDW60_RS25305 (81716) | 81716..81919 | + | 204 | WP_047090238.1 | hypothetical protein | - |
| QDW60_RS25310 (81841) | 81841..82089 | + | 249 | WP_074430098.1 | hypothetical protein | - |
| QDW60_RS25315 (82082) | 82082..82417 | + | 336 | WP_077763704.1 | hypothetical protein | - |
| QDW60_RS25320 (82330) | 82330..82536 | + | 207 | WP_000275853.1 | hypothetical protein | - |
| QDW60_RS25325 (82562) | 82562..83101 | + | 540 | WP_000290839.1 | single-stranded DNA-binding protein | - |
| QDW60_RS25330 (83164) | 83164..83397 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|