MGE detailed information
MGE type: Conjugative plasmid MGE length: 109222 bp
Accession: NZ_CP122654 Location: 1..109222 Organism: Escherichia coli strain ETEC4075 Replicon: plasmid unnamed2
Accession: NZ_CP122654 Location: 1..109222 Organism: Escherichia coli strain ETEC4075 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW61_RS24900 (1) | 1..849 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| QDW61_RS24905 (935) | 935..1270 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDW61_RS24910 (1504) | 1504..1836 | + | 333 | WP_052938717.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDW61_RS24915 (1847) | 1847..4546 | + | 2700 | WP_052938718.1 | hypothetical protein | Relaxase |
| QDW61_RS24920 (4582) | 4582..6873 | - | 2292 | WP_021497839.1 | F-type conjugative transfer protein TrbC | - |
| QDW61_RS24925 (6866) | 6866..7936 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDW61_RS24930 (7955) | 7955..9163 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (9343) | 9343..9405 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (9343) | 9343..9405 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (9343) | 9343..9405 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (9343) | 9343..9405 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QDW61_RS24935 (9455) | 9455..9607 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| QDW61_RS24940 (9679) | 9679..9930 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QDW61_RS24945 (10429) | 10429..10524 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QDW61_RS24950 (10589) | 10589..10765 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QDW61_RS24955 (11165) | 11165..11374 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDW61_RS24960 (11446) | 11446..12096 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDW61_RS24965 (12170) | 12170..14338 | - | 2169 | WP_052938719.1 | DotA/TraY family protein | - |
| QDW61_RS24970 (14435) | 14435..15019 | - | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| QDW61_RS24975 (15048) | 15048..16250 | - | 1203 | WP_052938672.1 | IncI1-type conjugal transfer protein TraW | - |
| QDW61_RS24980 (16217) | 16217..16831 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDW61_RS24985 (16831) | 16831..19875 | - | 3045 | WP_001024782.1 | IncI1-type conjugal transfer protein TraU | - |
| QDW61_RS24990 (19965) | 19965..20765 | - | 801 | WP_021497829.1 | IncI1-type conjugal transfer protein TraT | - |
| QDW61_RS24995 (20749) | 20749..20937 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDW61_RS25000 (21001) | 21001..21405 | - | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| QDW61_RS25005 (21456) | 21456..21983 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDW61_RS25010 (21983) | 21983..22687 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| QDW61_RS25015 (22687) | 22687..23976 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| QDW61_RS25020 (23979) | 23979..24962 | - | 984 | WP_052938673.1 | hypothetical protein | VF |
| QDW61_RS25025 (24973) | 24973..25665 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| QDW61_RS25030 (25662) | 25662..26009 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDW61_RS25035 (26027) | 26027..29791 | - | 3765 | WP_021497833.1 | DUF5710 domain-containing protein | - |
| QDW61_RS25040 (29881) | 29881..30432 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| QDW61_RS25045 (30447) | 30447..30737 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QDW61_RS25050 (30734) | 30734..31882 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDW61_RS25055 (31879) | 31879..32697 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDW61_RS25060 (32694) | 32694..33152 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDW61_RS25065 (33547) | 33547..34131 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDW61_RS25070 (34191) | 34191..35393 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QDW61_RS25075 (35479) | 35479..36303 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| QDW61_RS25080 (36454) | 36454..37608 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QDW61_RS25085 (38800) | 38800..39048 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QDW61_RS25090 (39045) | 39045..40337 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QDW61_RS25095 (40337) | 40337..40993 | - | 657 | WP_001193554.1 | hypothetical protein | VF |
| QDW61_RS25100 (40978) | 40978..41538 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDW61_RS25105 (41548) | 41548..42162 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QDW61_RS25110 (42180) | 42180..43277 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QDW61_RS25115 (43290) | 43290..44843 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QDW61_RS25120 (44854) | 44854..45306 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QDW61_RS25125 (45293) | 45293..46588 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QDW61_RS25130 (46581) | 46581..48263 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDW61_RS25135 (48277) | 48277..48714 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDW61_RS25140 (48714) | 48714..49780 | - | 1067 | Protein_48 | hypothetical protein | VF |
| QDW61_RS25145 (50454) | 50454..50906 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| QDW61_RS25150 (50949) | 50949..51203 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QDW61_RS25155 (51471) | 51471..52037 | - | 567 | WP_000776428.1 | protein TraD | - |
| QDW61_RS25160 (52051) | 52051..52734 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QDW61_RS25165 (52988) | 52988..53521 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QDW61_RS25170 (53963) | 53963..54250 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDW61_RS25175 (54168) | 54168..54398 | - | 231 | WP_228772074.1 | ash family protein | - |
| QDW61_RS25180 (55404) | 55404..56435 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| QDW61_RS25185 (57418) | 57418..58428 | - | 1011 | WP_096984501.1 | IS110 family transposase IS1663 | Transposase |
| QDW61_RS25190 (58821) | 58821..59090 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDW61_RS25195 (59090) | 59090..59368 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDW61_RS25200 (59408) | 59408..60256 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| QDW61_RS25205 (60493) | 60493..60618 | - | 126 | Protein_61 | MerR family transcriptional regulator | - |
| QDW61_RS25210 (60613) | 60613..62223 | + | 1611 | Protein_62 | DDE-type integrase/transposase/recombinase | - |
| QDW61_RS25215 (62226) | 62226..63086 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| QDW61_RS25220 (63188) | 63188..64711 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| QDW61_RS25225 (64698) | 64698..65483 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| QDW61_RS25230 (65659) | 65659..66159 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QDW61_RS25235 (66287) | 66287..67126 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QDW61_RS25240 (67120) | 67120..67467 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QDW61_RS25245 (67584) | 67584..68422 | - | 839 | Protein_69 | Streptomycin 3''-adenylyltransferase | ARG |
| QDW61_RS25250 (68515) | 68515..68988 | - | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| QDW61_RS25255 (69145) | 69145..70263 | + | 1119 | WP_000845049.1 | IS91 family transposase ISAzo26 | Transposase |
| QDW61_RS25260 (70235) | 70235..71071 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QDW61_RS25265 (71071) | 71071..71874 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QDW61_RS25270 (71935) | 71935..72750 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| QDW61_RS25275 (73058) | 73058..73909 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| QDW61_RS25280 (73896) | 73896..74615 | - | 720 | Protein_76 | helicase RepA family protein | - |
| QDW61_RS25285 (74665) | 74665..75369 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QDW61_RS25290 (75539) | 75539..75820 | - | 282 | Protein_78 | transposase zinc-binding domain-containing protein | - |
| QDW61_RS25295 (75967) | 75967..76827 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDW61_RS25300 (77010) | 77010..77348 | - | 339 | Protein_80 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW61_RS25305 (77412) | 77412..78116 | + | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW61_RS25310 (78169) | 78169..79437 | + | 1269 | Protein_82 | Tn3-like element TnAs3 family transposase | - |
| QDW61_RS25315 (79516) | 79516..80520 | + | 1005 | WP_282953783.1 | IS110 family transposase IS4321R | Transposase |
| QDW61_RS25320 (80785) | 80785..81189 | + | 405 | WP_044568872.1 | hypothetical protein | - |
| QDW61_RS25325 (81666) | 81666..81932 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| QDW61_RS25330 (81932) | 81932..82426 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| QDW61_RS25335 (82482) | 82482..83084 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| QDW61_RS25340 (83438) | 83438..84784 | + | 1347 | WP_001132019.1 | protein YagA | - |
| QDW61_RS25345 (85063) | 85063..86943 | + | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDW61_RS25350 (86961) | 86961..87308 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| QDW61_RS25355 (87427) | 87427..87774 | + | 348 | WP_000142424.1 | DUF6404 family protein | - |
| QDW61_RS25360 (87792) | 87792..88382 | - | 591 | WP_000194563.1 | hypothetical protein | - |
| QDW61_RS25365 (88379) | 88379..88639 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| QDW61_RS25370 (89208) | 89208..89621 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| QDW61_RS25375 (89623) | 89623..90408 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| QDW61_RS25380 (90992) | 90992..91624 | + | 633 | WP_000312331.1 | ParA family protein | - |
| QDW61_RS25385 (91624) | 91624..91998 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| QDW61_RS25390 (92237) | 92237..93211 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| QDW61_RS25395 (93215) | 93215..93607 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| QDW61_RS25400 (94288) | 94288..95190 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| QDW61_RS25405 (95194) | 95194..95499 | + | 306 | WP_001348080.1 | hypothetical protein | - |
| QDW61_RS25410 (95575) | 95575..96258 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QDW61_RS25415 (96259) | 96259..96480 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QDW61_RS25420 (96494) | 96494..96928 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| QDW61_RS25425 (96974) | 96974..97750 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| QDW61_RS25430 (98168) | 98168..98593 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| QDW61_RS25435 (98640) | 98640..99062 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| QDW61_RS25440 (99059) | 99059..99250 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDW61_RS25445 (99321) | 99321..99635 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QDW61_RS25450 (100019) | 100019..100546 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| QDW61_RS25455 (100604) | 100604..100837 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| QDW61_RS25460 (100896) | 100896..102854 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW61_RS25465 (102909) | 102909..103343 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| QDW61_RS25470 (103340) | 103340..104059 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| QDW61_RS25475 (104056) | 104056..104652 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| QDW61_RS25480 (105114) | 105114..105614 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QDW61_RS25485 (106343) | 106343..106777 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDW61_RS25490 (106871) | 106871..107137 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDW61_RS25495 (107202) | 107202..108140 | + | 939 | WP_000078704.1 | ISNCY family transposase ISRor2 | VF |
| QDW61_RS25500 (108203) | 108203..108361 | + | 159 | WP_000150310.1 | hypothetical protein | - |
| QDW61_RS25505 (108392) | 108392..108643 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|