MGE detailed information
MGE type: Conjugative plasmid MGE length: 98561 bp
Accession: NZ_CP122641 Location: 1..98561 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed7
Accession: NZ_CP122641 Location: 1..98561 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS28870 (1) | 1..1209 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| QDW62_RS28875 (1228) | 1228..2298 | + | 1071 | WP_052895276.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDW62_RS28880 (2291) | 2291..4582 | + | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| QDW62_RS28885 (4619) | 4619..7318 | - | 2700 | WP_006855641.1 | hypothetical protein | Relaxase |
| QDW62_RS28890 (7329) | 7329..7661 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QDW62_RS28895 (7895) | 7895..8230 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDW62_RS28900 (8316) | 8316..9164 | - | 849 | WP_001077030.1 | DUF4942 domain-containing protein | - |
| QDW62_RS28905 (9289) | 9289..9633 | - | 345 | WP_223683696.1 | hypothetical protein | - |
| QDW62_RS28910 (9744) | 9744..9995 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| QDW62_RS28915 (10026) | 10026..10271 | - | 246 | WP_001260884.1 | hypothetical protein | - |
| QDW62_RS28920 (10271) | 10271..11185 | - | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| QDW62_RS28925 (11250) | 11250..11516 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| QDW62_RS28930 (11609) | 11609..12043 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| QDW62_RS28935 (12772) | 12772..13272 | - | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| QDW62_RS28940 (13735) | 13735..14331 | - | 597 | WP_000978005.1 | hypothetical protein | - |
| QDW62_RS28945 (14328) | 14328..15047 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QDW62_RS28950 (15044) | 15044..15478 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| QDW62_RS28955 (15533) | 15533..17491 | - | 1959 | WP_282840401.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW62_RS28960 (17550) | 17550..17783 | - | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| QDW62_RS28965 (17841) | 17841..18368 | - | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| QDW62_RS28970 (18719) | 18719..19000 | - | 282 | WP_162713425.1 | hypothetical protein | - |
| QDW62_RS28975 (19138) | 19138..19329 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QDW62_RS28980 (19326) | 19326..19748 | - | 423 | WP_282840404.1 | hypothetical protein | - |
| QDW62_RS28985 (19795) | 19795..20220 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QDW62_RS28990 (20637) | 20637..21407 | - | 771 | WP_202020886.1 | hypothetical protein | - |
| QDW62_RS28995 (21458) | 21458..21925 | - | 468 | WP_236522761.1 | DUF1380 family protein | - |
| QDW62_RS29000 (21906) | 21906..22127 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| QDW62_RS29005 (22128) | 22128..22811 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QDW62_RS29010 (22888) | 22888..23199 | - | 312 | WP_236522836.1 | hypothetical protein | - |
| QDW62_RS29015 (23196) | 23196..24098 | - | 903 | WP_096917582.1 | DUF1281 domain-containing protein | - |
| QDW62_RS29020 (24517) | 24517..24765 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QDW62_RS29025 (24762) | 24762..25199 | + | 438 | WP_282840409.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QDW62_RS29030 (25199) | 25199..26470 | + | 1272 | WP_052971087.1 | Y-family DNA polymerase | - |
| QDW62_RS29035 (26475) | 26475..26867 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| QDW62_RS29040 (26872) | 26872..27843 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| QDW62_RS29045 (28072) | 28072..28716 | + | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| QDW62_RS29050 (28710) | 28710..28985 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| QDW62_RS29055 (29123) | 29123..29905 | - | 783 | WP_001372173.1 | site-specific integrase | - |
| QDW62_RS29060 (29973) | 29973..30581 | - | 609 | WP_000715519.1 | hypothetical protein | - |
| QDW62_RS29065 (30651) | 30651..31001 | - | 351 | WP_000493380.1 | hypothetical protein | - |
| QDW62_RS29070 (31468) | 31468..32154 | + | 687 | Protein_40 | DNA-binding protein | - |
| QDW62_RS29075 (32151) | 32151..32771 | + | 621 | WP_001247238.1 | hypothetical protein | - |
| QDW62_RS29080 (32768) | 32768..32959 | + | 192 | Protein_42 | hypothetical protein | - |
| QDW62_RS29085 (32975) | 32975..33556 | + | 582 | WP_223202817.1 | DUF2971 domain-containing protein | - |
| QDW62_RS29090 (33592) | 33592..34332 | + | 741 | WP_000884837.1 | abortive infection family protein | - |
| QDW62_RS29095 (34491) | 34491..35624 | - | 1134 | WP_044722458.1 | DUF3800 domain-containing protein | - |
| QDW62_RS29100 (35893) | 35893..36567 | + | 675 | WP_001306775.1 | hypothetical protein | - |
| QDW62_RS29105 (36982) | 36982..37236 | + | 255 | WP_000343107.1 | hypothetical protein | - |
| QDW62_RS29110 (37236) | 37236..37826 | + | 591 | WP_001306774.1 | hypothetical protein | - |
| QDW62_RS29115 (38039) | 38039..39091 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| QDW62_RS29120 (39267) | 39267..39869 | + | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| QDW62_RS29125 (39982) | 39982..40659 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QDW62_RS29130 (40659) | 40659..41006 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QDW62_RS29135 (41026) | 41026..42597 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| QDW62_RS29140 (42632) | 42632..43126 | + | 495 | WP_015058884.1 | hypothetical protein | - |
| QDW62_RS29145 (43126) | 43126..43392 | + | 267 | WP_000627832.1 | hypothetical protein | - |
| QDW62_RS29150 (43631) | 43631..43996 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS29155 (43996) | 43996..45183 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS29160 (45460) | 45460..45825 | + | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW62_RS29165 (45825) | 45825..47012 | + | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW62_RS29170 (47319) | 47319..47522 | - | 204 | Protein_60 | hypothetical protein | - |
| QDW62_RS29175 (47628) | 47628..47903 | - | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW62_RS29180 (47903) | 47903..48187 | - | 285 | WP_001178090.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QDW62_RS29185 (49093) | 49093..50124 | - | 1032 | WP_022630251.1 | plasmid replication initiator RepA | - |
| QDW62_RS29190 (51081) | 51081..51239 | + | 159 | Protein_64 | ash family protein | - |
| QDW62_RS29195 (51277) | 51277..51564 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDW62_RS29200 (52006) | 52006..52539 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QDW62_RS29205 (52793) | 52793..53476 | + | 684 | WP_000213863.1 | hypothetical protein | - |
| QDW62_RS29210 (53648) | 53648..53902 | + | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QDW62_RS29215 (54654) | 54654..55721 | + | 1068 | WP_021513968.1 | hypothetical protein | VF |
| QDW62_RS29220 (55721) | 55721..56158 | + | 438 | WP_000539811.1 | hypothetical protein | VF |
| QDW62_RS29225 (56172) | 56172..57854 | + | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDW62_RS29230 (57847) | 57847..59142 | + | 1296 | WP_000752776.1 | type 4b pilus protein PilO2 | - |
| QDW62_RS29235 (59129) | 59129..59581 | + | 453 | WP_001247333.1 | hypothetical protein | VF |
| QDW62_RS29240 (59592) | 59592..61145 | + | 1554 | WP_000362204.1 | hypothetical protein | VF |
| QDW62_RS29245 (61158) | 61158..62243 | + | 1086 | WP_001208803.1 | hypothetical protein | VF |
| QDW62_RS29250 (62260) | 62260..62874 | + | 615 | WP_000908228.1 | hypothetical protein | VF |
| QDW62_RS29255 (62884) | 62884..63444 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| QDW62_RS29260 (63429) | 63429..64085 | + | 657 | WP_001193551.1 | hypothetical protein | VF |
| QDW62_RS29265 (64073) | 64073..65497 | + | 1425 | WP_282840384.1 | hypothetical protein | VF |
| QDW62_RS29270 (65529) | 65529..66179 | + | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| QDW62_RS29275 (66179) | 66179..66526 | + | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| QDW62_RS29280 (66546) | 66546..68117 | + | 1572 | WP_000381442.1 | IS66 family transposase IS679 | Transposase |
| QDW62_RS29285 (69854) | 69854..71008 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| QDW62_RS29290 (71159) | 71159..71983 | + | 825 | WP_282840385.1 | conjugal transfer protein TraE | - |
| QDW62_RS29295 (72069) | 72069..73271 | + | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| QDW62_RS29300 (73331) | 73331..73915 | + | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| QDW62_RS29305 (74310) | 74310..74768 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDW62_RS29310 (74765) | 74765..75583 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QDW62_RS29315 (75580) | 75580..76728 | + | 1149 | WP_001024976.1 | putative protein YggR | VF |
| QDW62_RS29320 (76725) | 76725..77015 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| QDW62_RS29325 (77030) | 77030..77581 | + | 552 | WP_022630639.1 | Phospholipase D | VF |
| QDW62_RS29330 (77671) | 77671..81438 | + | 3768 | WP_022630638.1 | DUF5710 domain-containing protein | - |
| QDW62_RS29335 (81456) | 81456..81803 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDW62_RS29340 (81800) | 81800..82492 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QDW62_RS29345 (82503) | 82503..83486 | + | 984 | WP_021513963.1 | hypothetical protein | VF |
| QDW62_RS29350 (83489) | 83489..84778 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| QDW62_RS29355 (84778) | 84778..85482 | + | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| QDW62_RS29360 (85482) | 85482..86009 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDW62_RS29365 (86060) | 86060..86464 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QDW62_RS29370 (86528) | 86528..86716 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDW62_RS29375 (86700) | 86700..87500 | + | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| QDW62_RS29380 (87590) | 87590..90634 | + | 3045 | WP_282840386.1 | IncI1-type conjugal transfer protein TraU | - |
| QDW62_RS29385 (90634) | 90634..91248 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QDW62_RS29390 (91215) | 91215..92417 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QDW62_RS29395 (92446) | 92446..93030 | + | 585 | WP_282840387.1 | conjugal transfer protein TraX | - |
| QDW62_RS29400 (93127) | 93127..95295 | + | 2169 | WP_282840388.1 | DotA/TraY family protein | - |
| QDW62_RS29405 (95360) | 95360..96022 | + | 663 | WP_077738432.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDW62_RS29410 (96094) | 96094..96303 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDW62_RS29415 (96695) | 96695..96871 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (97357) | 97357..97408 | + | 52 | NuclAT_1 | - | - |
| - (97357) | 97357..97408 | + | 52 | NuclAT_1 | - | - |
| - (97357) | 97357..97408 | + | 52 | NuclAT_1 | - | - |
| - (97357) | 97357..97408 | + | 52 | NuclAT_1 | - | - |
| QDW62_RS29420 (97795) | 97795..98046 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| QDW62_RS29425 (98118) | 98118..98270 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (98320) | 98320..98382 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (98320) | 98320..98382 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (98320) | 98320..98382 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (98320) | 98320..98382 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|