MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 36533 bp
Accession: NZ_CP122639 Location: 1..36533 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed5
Accession: NZ_CP122639 Location: 1..36533 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS28110 (QDW62_28110) | 1..1119 | + | 1119 | WP_021548635.1 | Type IV secretion system protein virB10 | VF |
| QDW62_RS28115 (QDW62_28115) | 1121..2149 | + | 1029 | WP_001401678.1 | Type IV secretion system protein VirB11 | VF |
| QDW62_RS28120 (QDW62_28120) | 2136..3998 | + | 1863 | WP_000847102.1 | relaxosome-coupling protein TaxB | - |
| QDW62_RS28125 (QDW62_28125) | 4007..4429 | + | 423 | WP_001328552.1 | cag pathogenicity island Cag12 family protein | - |
| QDW62_RS28130 (QDW62_28130) | 4413..4718 | + | 306 | WP_000147044.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QDW62_RS28135 (QDW62_28135) | 4724..4978 | + | 255 | WP_000415096.1 | hypothetical protein | - |
| QDW62_RS28140 (QDW62_28140) | 5081..5389 | + | 309 | WP_000647576.1 | hypothetical protein | - |
| QDW62_RS28145 (QDW62_28145) | 5386..5880 | + | 495 | WP_001215680.1 | thermonuclease family protein | - |
| QDW62_RS28150 (QDW62_28150) | 5896..6300 | + | 405 | WP_001218543.1 | hypothetical protein | - |
| QDW62_RS28155 (QDW62_28155) | 6406..6981 | + | 576 | WP_001199074.1 | hypothetical protein | - |
| QDW62_RS28160 (QDW62_28160) | 6986..9139 | + | 2154 | WP_260733570.1 | type IA DNA topoisomerase | - |
| QDW62_RS28165 (QDW62_28165) | 9136..9342 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| QDW62_RS28170 (QDW62_28170) | 9360..9824 | + | 465 | WP_059342651.1 | H-NS family nucleoid-associated regulatory protein | - |
| QDW62_RS28175 (QDW62_28175) | 10570..10665 | + | 96 | WP_021534057.1 | DinQ-like type I toxin DqlB | - |
| QDW62_RS28180 (QDW62_28180) | 11328..11975 | + | 648 | WP_130559040.1 | division plane positioning ATPase MipZ | - |
| QDW62_RS28185 (QDW62_28185) | 12050..12319 | + | 270 | WP_001086090.1 | hypothetical protein | - |
| QDW62_RS28190 (QDW62_28190) | 12480..13289 | + | 810 | WP_277382658.1 | DUF2806 domain-containing protein | - |
| QDW62_RS28195 (QDW62_28195) | 13311..13964 | + | 654 | WP_076611454.1 | IS1595 family transposase ISEc69 | Transposase |
| QDW62_RS28200 (QDW62_28200) | 14078..15694 | + | 1617 | WP_065419574.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| QDW62_RS28205 (QDW62_28205) | 15743..16039 | + | 297 | WP_277382662.1 | hypothetical protein | - |
| QDW62_RS28210 (QDW62_28210) | 16078..16731 | + | 654 | WP_076611454.1 | IS1595 family transposase ISEc69 | Transposase |
| QDW62_RS28215 (QDW62_28215) | 16972..17499 | - | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| QDW62_RS28220 (QDW62_28220) | 17634..18038 | - | 405 | WP_012421203.1 | hypothetical protein | - |
| QDW62_RS28225 (QDW62_28225) | 18051..18287 | - | 237 | WP_071699791.1 | RepB family plasmid replication initiator protein | - |
| QDW62_RS28230 (QDW62_28230) | 18284..18916 | - | 633 | WP_077625774.1 | replication initiation protein | - |
| QDW62_RS28235 (QDW62_28235) | 20331..20846 | + | 516 | WP_001025395.1 | J domain-containing protein | - |
| QDW62_RS28240 (QDW62_28240) | 20951..21493 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| QDW62_RS28245 (QDW62_28245) | 21490..21741 | + | 252 | WP_001230707.1 | hypothetical protein | Toxin Detail |
| QDW62_RS28250 (QDW62_28250) | 21728..21955 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| QDW62_RS28255 (QDW62_28255) | 22409..22708 | + | 300 | WP_000650309.1 | hypothetical protein | - |
| QDW62_RS28260 (QDW62_28260) | 22799..23149 | + | 351 | WP_000854259.1 | hypothetical protein | - |
| QDW62_RS28265 (QDW62_28265) | 23454..23702 | + | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| QDW62_RS28270 (QDW62_28270) | 23699..24046 | + | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| QDW62_RS28275 (QDW62_28275) | 24407..24910 | + | 504 | WP_089552162.1 | relaxosome-coupling protein TaxA | - |
| QDW62_RS28280 (QDW62_28280) | 24914..26143 | + | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| QDW62_RS28285 (QDW62_28285) | 26220..26486 | + | 267 | WP_000160396.1 | hypothetical protein | - |
| QDW62_RS28290 (QDW62_28290) | 26491..26724 | + | 234 | WP_000121161.1 | EexN family lipoprotein | - |
| QDW62_RS28295 (QDW62_28295) | 27080..27700 | + | 621 | WP_000157548.1 | Type IV secretion system protein virB1 | VF |
| QDW62_RS28300 (QDW62_28300) | 27714..28040 | + | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| QDW62_RS28305 (QDW62_28305) | 28059..29237 | + | 1179 | WP_282840374.1 | VirB3 family type IV secretion system protein | - |
| QDW62_RS28310 (QDW62_28310) | 29410..30597 | - | 1188 | WP_000937591.1 | IS91 family transposase ISEc37 | Transposase |
| QDW62_RS28315 (QDW62_28315) | 30597..30962 | - | 366 | WP_000091308.1 | hypothetical protein | - |
| QDW62_RS28320 (QDW62_28320) | 31073..32635 | + | 1563 | WP_282840376.1 | Type IV secretion system protein virB4 | VF |
| QDW62_RS28325 (QDW62_28325) | 32647..33363 | + | 717 | WP_000832282.1 | type IV secretion system protein | - |
| QDW62_RS28330 (QDW62_28330) | 33374..34453 | + | 1080 | WP_000007791.1 | hypothetical protein | VF |
| QDW62_RS28335 (QDW62_28335) | 34950..35636 | + | 687 | WP_042098128.1 | Type IV secretion system protein virB8 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|