MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106966 bp
Accession: NZ_CP122638 Location: 1..106966 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed4
Accession: NZ_CP122638 Location: 1..106966 Organism: Escherichia coli strain ETEC4085 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS27460 (1) | 1..5295 | + | 5295 | WP_000949132.1 | Multifunctional conjugation protein TraI | Relaxase |
| QDW62_RS27465 (5313) | 5313..5879 | + | 567 | WP_000469207.1 | DUF2726 domain-containing protein | - |
| QDW62_RS27470 (5876) | 5876..6607 | + | 732 | WP_001071490.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| QDW62_RS27475 (6797) | 6797..7081 | + | 285 | WP_001398227.1 | hypothetical protein | - |
| QDW62_RS27480 (7187) | 7187..8182 | + | 996 | WP_063109503.1 | hypothetical protein | - |
| QDW62_RS27485 (8253) | 8253..8381 | + | 129 | Protein_6 | Hok/Gef family protein | - |
| QDW62_RS27490 (8626) | 8626..8886 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| QDW62_RS27495 (9111) | 9111..9185 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QDW62_RS27500 (9178) | 9178..10035 | + | 858 | WP_000130999.1 | incFII family plasmid replication initiator RepA | - |
| QDW62_RS27505 (10737) | 10737..10877 | + | 141 | WP_021503378.1 | hypothetical protein | - |
| QDW62_RS27510 (10952) | 10952..11236 | + | 285 | WP_072141942.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QDW62_RS27515 (11224) | 11224..11709 | + | 486 | WP_000501972.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QDW62_RS27520 (12035) | 12035..13222 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27525 (13222) | 13222..13587 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27535 (14675) | 14675..15019 | + | 345 | WP_272482423.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QDW62_RS27540 (15019) | 15019..15564 | + | 546 | WP_236295085.1 | hypothetical protein | VF |
| QDW62_RS27545 (15576) | 15576..18014 | + | 2439 | WP_282840334.1 | Outer membrane usher protein YraJ | VF |
| QDW62_RS27550 (18007) | 18007..18783 | + | 777 | WP_000044493.1 | Chaperone protein FaeE | VF |
| QDW62_RS27555 (18818) | 18818..19309 | + | 492 | WP_000753462.1 | hypothetical protein | VF |
| QDW62_RS27560 (19546) | 19546..20397 | + | 852 | WP_236295087.1 | K88 fimbrial protein AC | VF |
| QDW62_RS27565 (20568) | 20568..21365 | + | 798 | WP_000704731.1 | hypothetical protein | VF |
| QDW62_RS27570 (21395) | 21395..22159 | + | 765 | WP_000758129.1 | hypothetical protein | VF |
| QDW62_RS27575 (22176) | 22176..22949 | + | 774 | WP_000932014.1 | hypothetical protein | VF |
| QDW62_RS27580 (22949) | 22949..23080 | + | 132 | WP_255403664.1 | hypothetical protein | - |
| QDW62_RS27585 (23099) | 23099..23377 | - | 279 | Protein_26 | ISKra4 family transposase ISEc51 | Transposase |
| QDW62_RS27590 (23420) | 23420..23899 | - | 480 | Protein_27 | IS3 family transposase ISEc25 | Transposase |
| QDW62_RS27595 (23983) | 23983..24561 | - | 579 | Protein_28 | group II intron maturase-specific domain-containing protein | - |
| QDW62_RS27600 (24748) | 24748..25935 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27605 (25935) | 25935..26300 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27610 (26389) | 26389..26930 | - | 542 | Protein_31 | IS3 family transposase IS2 | Transposase |
| QDW62_RS27615 (27006) | 27006..27158 | + | 153 | Protein_32 | transposase | - |
| QDW62_RS27620 (27316) | 27316..27417 | + | 102 | Protein_33 | restriction endonuclease subunit M | - |
| QDW62_RS27625 (27523) | 27523..29019 | + | 1497 | WP_000231224.1 | hypothetical protein | VF |
| QDW62_RS27630 (29135) | 29135..29413 | - | 279 | Protein_35 | transposase | - |
| QDW62_RS27635 (29440) | 29440..31053 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27640 (31084) | 31084..31434 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27645 (31431) | 31431..31856 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDW62_RS27650 (31942) | 31942..32785 | - | 844 | Protein_39 | IS3 family transposase | - |
| QDW62_RS27655 (33173) | 33173..33388 | - | 216 | WP_000739296.1 | heat-stable enterotoxin ST-II | - |
| QDW62_RS27660 (33865) | 33865..34444 | - | 580 | Protein_41 | IS256 family transposase | - |
| QDW62_RS27665 (34470) | 34470..34769 | + | 300 | Protein_42 | IS3 family transposase | - |
| QDW62_RS27670 (34960) | 34960..36537 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| QDW62_RS27675 (36847) | 36847..37407 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QDW62_RS27680 (37411) | 37411..40377 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QDW62_RS27685 (40410) | 40410..40759 | + | 350 | Protein_46 | integrase core domain-containing protein | - |
| QDW62_RS27690 (40851) | 40851..41822 | - | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| QDW62_RS27695 (42034) | 42034..42747 | - | 714 | WP_001424997.1 | hypothetical protein | - |
| QDW62_RS27700 (43136) | 43136..43340 | + | 205 | Protein_49 | IS110 family transposase | - |
| QDW62_RS27705 (43614) | 43614..44390 | + | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| QDW62_RS27710 (44387) | 44387..44761 | + | 375 | WP_015675362.1 | heat-labile enterotoxin LT subunit B | - |
| QDW62_RS27715 (45109) | 45109..45505 | + | 397 | Protein_52 | ATP-binding protein | - |
| QDW62_RS27720 (45698) | 45698..46437 | + | 740 | Protein_53 | IS3 family transposase IS1203 | Transposase |
| QDW62_RS27725 (46739) | 46739..47104 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27730 (47104) | 47104..48291 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27735 (48568) | 48568..48933 | + | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27740 (48933) | 48933..50120 | + | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27745 (50389) | 50389..50754 | - | 366 | Protein_58 | transposase DNA-binding-containing protein | - |
| QDW62_RS27750 (50988) | 50988..51950 | - | 963 | WP_000756327.1 | ParB family protein | - |
| QDW62_RS27755 (51947) | 51947..53152 | - | 1206 | WP_000817634.1 | Plasmid partition protein A | VF |
| QDW62_RS27760 (53526) | 53526..53738 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| QDW62_RS27765 (53911) | 53911..54162 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QDW62_RS27770 (54159) | 54159..54446 | + | 288 | WP_001270417.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QDW62_RS27775 (54448) | 54448..54693 | + | 246 | Protein_64 | IS3 family transposase ISKpn37 | Transposase |
| QDW62_RS27780 (55373) | 55373..56350 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| QDW62_RS27785 (56635) | 56635..57375 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| QDW62_RS27790 (57738) | 57738..58032 | - | 295 | Protein_67 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QDW62_RS27795 (58019) | 58019..58269 | - | 251 | Protein_68 | type II toxin-antitoxin system ParD family antitoxin | - |
| QDW62_RS27800 (58792) | 58792..58901 | - | 110 | Protein_69 | IS5/IS1182 family transposase | - |
| QDW62_RS27805 (59352) | 59352..59594 | + | 243 | WP_050562259.1 | toxin-activating lysine-acyltransferase | - |
| QDW62_RS27810 (60066) | 60066..60194 | + | 129 | Protein_71 | Transcriptional repressor MprA | VF |
| QDW62_RS27815 (60243) | 60243..60566 | + | 324 | WP_230909587.1 | Transcriptional repressor MprA | VF |
| QDW62_RS27820 (60913) | 60913..62036 | - | 1124 | Protein_73 | IS3 family transposase IS3F | Transposase |
| QDW62_RS27825 (62106) | 62106..62279 | + | 174 | Protein_74 | IS3 family transposase | - |
| QDW62_RS27830 (62357) | 62357..63024 | + | 668 | Protein_75 | IS3 family transposase ISKpn38 | Transposase |
| QDW62_RS27835 (63052) | 63052..63273 | - | 222 | Protein_76 | IS3 family transposase IS2 | Transposase |
| QDW62_RS27840 (63462) | 63462..64649 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW62_RS27845 (64649) | 64649..65014 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW62_RS27850 (65246) | 65246..65329 | - | 84 | Protein_79 | DUF4113 domain-containing protein | - |
| QDW62_RS27855 (65331) | 65331..65859 | + | 529 | Protein_80 | DUF1281 domain-containing protein | - |
| QDW62_RS27860 (65856) | 65856..66167 | + | 312 | WP_001309256.1 | hypothetical protein | - |
| QDW62_RS27865 (66244) | 66244..66315 | + | 72 | Protein_82 | hypothetical protein | - |
| QDW62_RS27870 (66397) | 66397..68097 | - | 1701 | WP_000125555.1 | group II intron reverse transcriptase/maturase | - |
| QDW62_RS27875 (68719) | 68719..69330 | + | 612 | Protein_84 | DNA methylase | - |
| QDW62_RS27880 (69331) | 69331..69552 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| QDW62_RS27885 (69566) | 69566..70000 | + | 435 | WP_000274480.1 | DUF1380 family protein | - |
| QDW62_RS27890 (70051) | 70051..70830 | + | 780 | WP_001423681.1 | hypothetical protein | - |
| QDW62_RS27895 (71247) | 71247..71672 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QDW62_RS27900 (71719) | 71719..72138 | + | 420 | WP_000271716.1 | DUF1380 family protein | - |
| QDW62_RS27905 (72138) | 72138..72329 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDW62_RS27910 (73316) | 73316..73546 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QDW62_RS27915 (73598) | 73598..74959 | + | 1362 | WP_000170653.1 | DUF3560 domain-containing protein | - |
| QDW62_RS27920 (75006) | 75006..75569 | + | 564 | WP_001423687.1 | class I SAM-dependent methyltransferase | - |
| QDW62_RS27925 (75655) | 75655..76081 | - | 427 | Protein_94 | hypothetical protein | - |
| QDW62_RS27930 (76151) | 76151..76357 | + | 207 | WP_000275848.1 | hypothetical protein | - |
| QDW62_RS27935 (76383) | 76383..76922 | + | 540 | WP_000290811.1 | single-stranded DNA-binding protein | - |
| QDW62_RS27940 (76984) | 76984..77217 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| QDW62_RS27945 (77281) | 77281..79239 | + | 1959 | WP_000117204.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW62_RS27950 (79294) | 79294..79728 | + | 435 | WP_000845912.1 | conjugation system SOS inhibitor PsiB | - |
| QDW62_RS27955 (79725) | 79725..80533 | + | 809 | Protein_100 | plasmid SOS inhibition protein A | - |
| - (80502) | 80502..80700 | + | 199 | NuclAT_0 | - | - |
| - (80502) | 80502..80700 | + | 199 | NuclAT_0 | - | - |
| - (80502) | 80502..80700 | + | 199 | NuclAT_0 | - | - |
| - (80502) | 80502..80700 | + | 199 | NuclAT_0 | - | - |
| QDW62_RS27960 (80707) | 80707..80856 | + | 150 | Protein_101 | DUF5431 family protein | - |
| QDW62_RS27965 (80798) | 80798..80923 | + | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| QDW62_RS27970 (81224) | 81224..81410 | - | 187 | Protein_103 | pilus protein | - |
| QDW62_RS27975 (81470) | 81470..81757 | + | 288 | WP_000107541.1 | hypothetical protein | - |
| QDW62_RS27980 (81875) | 81875..82696 | + | 822 | WP_001424949.1 | DUF932 domain-containing protein | - |
| QDW62_RS27985 (82992) | 82992..83639 | - | 648 | WP_282840319.1 | hypothetical protein | VF |
| QDW62_RS27990 (83931) | 83931..84317 | + | 387 | WP_001137413.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QDW62_RS27995 (84796) | 84796..85077 | + | 282 | WP_000974581.1 | hypothetical protein | - |
| QDW62_RS28000 (85293) | 85293..85460 | + | 168 | WP_157187929.1 | hypothetical protein | - |
| QDW62_RS28005 (85558) | 85558..85917 | + | 360 | WP_001054135.1 | type IV conjugative transfer system pilin TraA | - |
| QDW62_RS28010 (85919) | 85919..86224 | + | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| QDW62_RS28015 (86244) | 86244..86807 | + | 564 | WP_000406018.1 | type IV conjugative transfer system protein TraE | - |
| QDW62_RS28020 (86797) | 86797..87537 | + | 741 | WP_000794313.1 | type-F conjugative transfer system secretin TraK | - |
| QDW62_RS28025 (87524) | 87524..88888 | + | 1365 | WP_000024506.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QDW62_RS28030 (89000) | 89000..89224 | + | 225 | WP_000786057.1 | TraR/DksA C4-type zinc finger protein | - |
| QDW62_RS28035 (89330) | 89330..89929 | + | 600 | WP_001046445.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QDW62_RS28040 (89940) | 89940..92531 | + | 2592 | WP_000714174.1 | type IV secretion system protein TraC | - |
| QDW62_RS28045 (92528) | 92528..92992 | + | 465 | WP_000206177.1 | type-F conjugative transfer system protein TrbI | - |
| QDW62_RS28050 (92992) | 92992..93627 | + | 636 | WP_000286241.1 | type-F conjugative transfer system protein TraW | - |
| QDW62_RS28055 (93624) | 93624..94610 | + | 987 | WP_001083236.1 | conjugal transfer pilus assembly protein TraU | - |
| QDW62_RS28060 (94621) | 94621..94989 | + | 369 | WP_282840321.1 | hypothetical protein | - |
| QDW62_RS28065 (94986) | 94986..95600 | + | 615 | WP_000832605.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QDW62_RS28070 (95597) | 95597..97435 | + | 1839 | WP_000833263.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QDW62_RS28075 (97432) | 97432..98211 | + | 780 | WP_001202910.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QDW62_RS28080 (98235) | 98235..98837 | + | 603 | WP_000906495.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QDW62_RS28085 (98843) | 98843..100204 | + | 1362 | WP_001237463.1 | conjugal transfer pilus assembly protein TraH | - |
| QDW62_RS28090 (100206) | 100206..103088 | + | 2883 | WP_000963403.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QDW62_RS28095 (103098) | 103098..103328 | + | 231 | WP_282840324.1 | hypothetical protein | - |
| QDW62_RS28100 (103840) | 103840..104577 | + | 738 | WP_000812365.1 | conjugal transfer complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|