MGE detailed information
MGE type: Genomic_island MGE length: 9357 bp
Accession: NZ_CP122634 Location: 4725665..4735021 Organism: Escherichia coli strain ETEC4085 Replicon: chromosome
Accession: NZ_CP122634 Location: 4725665..4735021 Organism: Escherichia coli strain ETEC4085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW62_RS23680 (4720826) | 4720826..4722127 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QDW62_RS23685 (4722243) | 4722243..4722581 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QDW62_RS23690 (4722557) | 4722557..4724254 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| QDW62_RS23695 (4724291) | 4724291..4724866 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDW62_RS23705 (4725665) | 4725665..4727203 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDW62_RS23710 (4727569) | 4727569..4728903 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDW62_RS23715 (4728983) | 4728983..4731130 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDW62_RS23720 (4731189) | 4731189..4732646 | + | 1458 | WP_032167241.1 | dipeptide/tripeptide permease DtpC | - |
| QDW62_RS23725 (4732883) | 4732883..4734400 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDW62_RS23730 (4734524) | 4734524..4734697 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDW62_RS23735 (4734725) | 4734725..4735021 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDW62_RS23740 (4735248) | 4735248..4735520 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QDW62_RS23745 (4735532) | 4735532..4735762 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDW62_RS23750 (4735943) | 4735943..4737574 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| QDW62_RS23755 (4737571) | 4737571..4738290 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |