MGE detailed information
MGE type: Conjugative plasmid MGE length: 110098 bp
Accession: NZ_CP122631 Location: 1..110098 Organism: Escherichia coli strain ETEC4088 Replicon: plasmid unnamed2
Accession: NZ_CP122631 Location: 1..110098 Organism: Escherichia coli strain ETEC4088 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW58_RS24175 (1) | 1..2700 | + | 2700 | WP_001354015.1 | Protein TraI | Relaxase |
| QDW58_RS24180 (2737) | 2737..5028 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDW58_RS24185 (5021) | 5021..6091 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDW58_RS24190 (6110) | 6110..7318 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QDW58_RS24195 (7610) | 7610..7762 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QDW58_RS24200 (7834) | 7834..7974 | - | 141 | WP_000880644.1 | hypothetical protein | - |
| QDW58_RS24205 (8586) | 8586..8681 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QDW58_RS24210 (8746) | 8746..8922 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| QDW58_RS24215 (9314) | 9314..9523 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDW58_RS24220 (9595) | 9595..10257 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDW58_RS24225 (10322) | 10322..12484 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| QDW58_RS24230 (12581) | 12581..13165 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDW58_RS24235 (13194) | 13194..14396 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QDW58_RS24240 (14363) | 14363..14977 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| QDW58_RS24245 (14977) | 14977..18021 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QDW58_RS24250 (18111) | 18111..18911 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDW58_RS24255 (18895) | 18895..19083 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDW58_RS24260 (19147) | 19147..19551 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| QDW58_RS24265 (19602) | 19602..20129 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDW58_RS24270 (20129) | 20129..20833 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDW58_RS24275 (20833) | 20833..21000 | - | 168 | Protein_20 | conjugal transfer protein TraO | - |
| QDW58_RS24280 (21068) | 21068..21850 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| QDW58_RS24285 (21847) | 21847..22869 | - | 1023 | WP_001349550.1 | IS21 family transposase IS100kyp | Transposase |
| QDW58_RS24290 (22951) | 22951..24081 | - | 1131 | Protein_23 | conjugal transfer protein TraO | - |
| QDW58_RS24295 (24084) | 24084..25067 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QDW58_RS24300 (25078) | 25078..25770 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| QDW58_RS24305 (25767) | 25767..26114 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDW58_RS24310 (26132) | 26132..29899 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| QDW58_RS24315 (29989) | 29989..30540 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QDW58_RS24320 (30555) | 30555..30845 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QDW58_RS24325 (30842) | 30842..31990 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDW58_RS24330 (31987) | 31987..32805 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QDW58_RS24335 (32802) | 32802..33260 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDW58_RS24340 (33655) | 33655..34239 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDW58_RS24345 (34299) | 34299..35501 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QDW58_RS24350 (35586) | 35586..36410 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QDW58_RS24355 (36561) | 36561..37715 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QDW58_RS24360 (39236) | 39236..39484 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QDW58_RS24365 (39481) | 39481..40773 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QDW58_RS24370 (40773) | 40773..41429 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QDW58_RS24375 (41414) | 41414..41974 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDW58_RS24380 (41984) | 41984..42598 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QDW58_RS24385 (42616) | 42616..43713 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QDW58_RS24390 (43726) | 43726..45279 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QDW58_RS24395 (45290) | 45290..45742 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QDW58_RS24400 (45729) | 45729..47024 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QDW58_RS24405 (47017) | 47017..48699 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QDW58_RS24410 (48713) | 48713..49150 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDW58_RS24415 (49150) | 49150..50217 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QDW58_RS24420 (50891) | 50891..51343 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| QDW58_RS24425 (51386) | 51386..51640 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QDW58_RS24430 (51908) | 51908..52474 | - | 567 | WP_000776428.1 | protein TraD | - |
| QDW58_RS24435 (52488) | 52488..53171 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QDW58_RS24440 (53425) | 53425..53958 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QDW58_RS24445 (54400) | 54400..54687 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDW58_RS24450 (54605) | 54605..54883 | - | 279 | WP_219065241.1 | ash family protein | - |
| QDW58_RS24455 (55841) | 55841..56872 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| QDW58_RS24460 (57568) | 57568..57726 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| QDW58_RS24465 (57781) | 57781..58050 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | - |
| QDW58_RS24470 (58050) | 58050..58328 | + | 279 | WP_244577696.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDW58_RS24475 (58368) | 58368..59216 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| QDW58_RS24480 (59453) | 59453..59578 | - | 126 | Protein_61 | MerR family transcriptional regulator | - |
| QDW58_RS24485 (59573) | 59573..61183 | + | 1611 | Protein_62 | DDE-type integrase/transposase/recombinase | - |
| QDW58_RS24490 (61186) | 61186..62046 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| QDW58_RS24495 (62148) | 62148..63671 | + | 1524 | WP_001324342.1 | IS21 family transposase IS1326 | Transposase |
| QDW58_RS24500 (63658) | 63658..64443 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| QDW58_RS24505 (64619) | 64619..65119 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QDW58_RS24510 (65247) | 65247..66086 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QDW58_RS24515 (66080) | 66080..66427 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QDW58_RS24520 (66544) | 66544..67382 | - | 839 | Protein_69 | Streptomycin 3''-adenylyltransferase | ARG |
| QDW58_RS24525 (67475) | 67475..67948 | - | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| QDW58_RS24530 (68105) | 68105..69223 | + | 1119 | WP_000845049.1 | IS91 family transposase ISAzo26 | Transposase |
| QDW58_RS24535 (69195) | 69195..70031 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QDW58_RS24540 (70031) | 70031..70834 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QDW58_RS24545 (70895) | 70895..71710 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| QDW58_RS24550 (72017) | 72017..72868 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| QDW58_RS24555 (72855) | 72855..73574 | - | 720 | Protein_76 | helicase RepA family protein | - |
| QDW58_RS24560 (73624) | 73624..74328 | - | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW58_RS24565 (74392) | 74392..74730 | + | 339 | Protein_78 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW58_RS24570 (74913) | 74913..75773 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDW58_RS24575 (75920) | 75920..76201 | + | 282 | Protein_80 | transposase zinc-binding domain-containing protein | - |
| QDW58_RS24580 (76371) | 76371..77075 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QDW58_RS24585 (77118) | 77118..79796 | + | 2679 | Protein_82 | Tn3-like element TnAs3 family transposase | - |
| QDW58_RS24590 (79730) | 79730..80221 | + | 492 | WP_000068661.1 | hypothetical protein | - |
| QDW58_RS24595 (80698) | 80698..80964 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| QDW58_RS24600 (80964) | 80964..81458 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| QDW58_RS24605 (81514) | 81514..82116 | - | 603 | WP_000517689.1 | ProQ/FINO family protein | - |
| QDW58_RS24610 (82470) | 82470..83816 | + | 1347 | WP_001132019.1 | protein YagA | - |
| QDW58_RS24615 (84095) | 84095..85975 | + | 1881 | WP_001283356.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QDW58_RS24620 (85993) | 85993..86340 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| QDW58_RS24625 (86459) | 86459..86806 | + | 348 | WP_000142424.1 | DUF6404 family protein | - |
| QDW58_RS24630 (86824) | 86824..87414 | - | 591 | WP_000194561.1 | hypothetical protein | - |
| QDW58_RS24635 (87411) | 87411..87671 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| QDW58_RS24640 (88240) | 88240..88653 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| QDW58_RS24645 (88655) | 88655..89440 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| QDW58_RS24650 (90024) | 90024..90656 | + | 633 | WP_000312331.1 | ParA family protein | - |
| QDW58_RS24655 (90656) | 90656..91030 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| QDW58_RS24660 (91269) | 91269..92243 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| QDW58_RS24665 (92247) | 92247..92639 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| QDW58_RS24670 (93320) | 93320..94222 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| QDW58_RS24675 (94226) | 94226..94531 | + | 306 | WP_001348080.1 | hypothetical protein | - |
| QDW58_RS24680 (94607) | 94607..95290 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QDW58_RS24685 (95291) | 95291..95512 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QDW58_RS24690 (95526) | 95526..95960 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| QDW58_RS24695 (96006) | 96006..96782 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| QDW58_RS24700 (97200) | 97200..97625 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| QDW58_RS24705 (97672) | 97672..98094 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| QDW58_RS24710 (98091) | 98091..98282 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDW58_RS24715 (98353) | 98353..98667 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QDW58_RS24720 (99051) | 99051..99578 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| QDW58_RS24725 (99636) | 99636..99869 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| QDW58_RS24730 (99928) | 99928..101886 | + | 1959 | WP_196046562.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW58_RS24735 (101941) | 101941..102375 | + | 435 | WP_094320532.1 | conjugation system SOS inhibitor PsiB | - |
| QDW58_RS24740 (102372) | 102372..103091 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| QDW58_RS24745 (103088) | 103088..103684 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| QDW58_RS24750 (104146) | 104146..104646 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QDW58_RS24755 (105375) | 105375..105809 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDW58_RS24760 (105903) | 105903..106169 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDW58_RS24765 (106234) | 106234..107172 | + | 939 | WP_000078704.1 | Recombination-promoting nuclease RpnA | VF |
| QDW58_RS24770 (107195) | 107195..107392 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| QDW58_RS24775 (107423) | 107423..107674 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDW58_RS24780 (108254) | 108254..109102 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| QDW58_RS24785 (109188) | 109188..109523 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDW58_RS24790 (109756) | 109756..110088 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|