MGE detailed information
MGE type: Conjugative plasmid MGE length: 107589 bp
Accession: NZ_CP122623 Location: 1..107589 Organism: Escherichia coli strain ETEC4090 Replicon: plasmid unnamed3
Accession: NZ_CP122623 Location: 1..107589 Organism: Escherichia coli strain ETEC4090 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW69_RS27640 (1) | 1..2700 | + | 2700 | WP_001354015.1 | hypothetical protein | Relaxase |
| QDW69_RS27645 (2737) | 2737..5028 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QDW69_RS27650 (5021) | 5021..6091 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| QDW69_RS27655 (6110) | 6110..7318 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (7498) | 7498..7555 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| QDW69_RS27660 (7610) | 7610..7762 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QDW69_RS27665 (7834) | 7834..8085 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| QDW69_RS27670 (8586) | 8586..8681 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QDW69_RS27675 (8746) | 8746..8922 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| QDW69_RS27680 (9314) | 9314..9523 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QDW69_RS27685 (9595) | 9595..10257 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QDW69_RS27690 (10322) | 10322..12484 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| QDW69_RS27695 (12581) | 12581..13165 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QDW69_RS27700 (13194) | 13194..14396 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| QDW69_RS27705 (14363) | 14363..14977 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| QDW69_RS27710 (14977) | 14977..18021 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QDW69_RS27715 (18111) | 18111..18911 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QDW69_RS27720 (18895) | 18895..19083 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QDW69_RS27725 (19147) | 19147..19551 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| QDW69_RS27730 (19602) | 19602..20129 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QDW69_RS27735 (20129) | 20129..20833 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QDW69_RS27740 (20833) | 20833..22122 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| QDW69_RS27745 (22125) | 22125..23108 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QDW69_RS27750 (23119) | 23119..23811 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| QDW69_RS27755 (23808) | 23808..24155 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QDW69_RS27760 (24173) | 24173..27940 | - | 3768 | WP_001141529.1 | DUF5710 domain-containing protein | - |
| QDW69_RS27765 (28030) | 28030..28581 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QDW69_RS27770 (28596) | 28596..28886 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QDW69_RS27775 (28883) | 28883..30031 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QDW69_RS27780 (30028) | 30028..30846 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QDW69_RS27785 (30843) | 30843..31301 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QDW69_RS27790 (31696) | 31696..32280 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QDW69_RS27795 (32340) | 32340..33542 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QDW69_RS27800 (33627) | 33627..34451 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QDW69_RS27805 (34602) | 34602..35756 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QDW69_RS27810 (35755) | 35755..36039 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| QDW69_RS27815 (37277) | 37277..37525 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QDW69_RS27820 (37522) | 37522..38814 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QDW69_RS27825 (38814) | 38814..39470 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QDW69_RS27830 (39455) | 39455..40015 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QDW69_RS27835 (40025) | 40025..40639 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QDW69_RS27840 (40657) | 40657..41754 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QDW69_RS27845 (41767) | 41767..43320 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QDW69_RS27850 (43331) | 43331..43783 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QDW69_RS27855 (43770) | 43770..45065 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QDW69_RS27860 (45058) | 45058..46740 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QDW69_RS27865 (46754) | 46754..47191 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QDW69_RS27870 (47191) | 47191..48257 | - | 1067 | Protein_46 | hypothetical protein | VF |
| QDW69_RS27875 (48931) | 48931..49383 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| QDW69_RS27880 (49426) | 49426..49680 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QDW69_RS27885 (49948) | 49948..50514 | - | 567 | WP_000776428.1 | protein TraD | - |
| QDW69_RS27890 (50528) | 50528..51211 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QDW69_RS27895 (51465) | 51465..51998 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QDW69_RS27900 (52440) | 52440..52727 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QDW69_RS27905 (52645) | 52645..52923 | - | 279 | WP_219065241.1 | ash family protein | - |
| QDW69_RS27910 (53881) | 53881..54912 | + | 1032 | WP_000907875.1 | plasmid replication initiator RepA | - |
| QDW69_RS27915 (55608) | 55608..55766 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| QDW69_RS27920 (55821) | 55821..56090 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QDW69_RS27925 (56090) | 56090..56368 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QDW69_RS27930 (56408) | 56408..56560 | + | 153 | Protein_58 | 3'-5' exonuclease | - |
| QDW69_RS27935 (56749) | 56749..57936 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27940 (57936) | 57936..58301 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW69_RS27945 (58578) | 58578..59765 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27950 (59765) | 59765..60130 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW69_RS27955 (60407) | 60407..61594 | - | 1188 | WP_000937614.1 | IS91 family transposase IS91 | Transposase |
| QDW69_RS27960 (61594) | 61594..61959 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| QDW69_RS27965 (62044) | 62044..63291 | + | 1248 | Protein_65 | transposase family protein | - |
| QDW69_RS27970 (63294) | 63294..64154 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| QDW69_RS27975 (64256) | 64256..65779 | + | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| QDW69_RS27980 (65766) | 65766..66551 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| QDW69_RS27985 (66727) | 66727..67227 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QDW69_RS27990 (67355) | 67355..68194 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QDW69_RS27995 (68188) | 68188..68535 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QDW69_RS28000 (68652) | 68652..69490 | - | 839 | Protein_72 | Streptomycin 3''-adenylyltransferase | ARG |
| QDW69_RS28005 (69583) | 69583..70056 | - | 474 | WP_000777555.1 | Dihydrofolate reductase type 1 | ARG |
| QDW69_RS28010 (70213) | 70213..71331 | + | 1119 | WP_000845049.1 | IS91 family transposase ISAzo26 | Transposase |
| QDW69_RS28015 (71303) | 71303..72139 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QDW69_RS28020 (72139) | 72139..72942 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QDW69_RS28025 (73003) | 73003..73818 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| QDW69_RS28030 (74126) | 74126..74977 | - | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| QDW69_RS28035 (74964) | 74964..75683 | - | 720 | Protein_79 | helicase RepA family protein | - |
| QDW69_RS28040 (75733) | 75733..76437 | - | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW69_RS28045 (76501) | 76501..76839 | + | 339 | Protein_81 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QDW69_RS28050 (77022) | 77022..77882 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QDW69_RS28055 (78029) | 78029..78310 | + | 282 | Protein_83 | transposase zinc-binding domain-containing protein | - |
| QDW69_RS28060 (78480) | 78480..79184 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| QDW69_RS28065 (79236) | 79236..79778 | + | 543 | Protein_85 | Tn3 family transposase | - |
| QDW69_RS28070 (79833) | 79833..80156 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| QDW69_RS28075 (80261) | 80261..81394 | + | 1134 | WP_001089728.1 | permease | - |
| QDW69_RS28080 (81687) | 81687..82304 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| QDW69_RS28085 (82495) | 82495..84051 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| QDW69_RS28090 (84314) | 84314..84904 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| QDW69_RS28095 (84904) | 84904..85161 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| QDW69_RS28100 (85730) | 85730..86143 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| QDW69_RS28105 (86145) | 86145..86930 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| QDW69_RS28110 (87514) | 87514..88146 | + | 633 | WP_000312331.1 | ParA family protein | - |
| QDW69_RS28115 (88146) | 88146..88520 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| QDW69_RS28120 (88759) | 88759..89733 | + | 975 | WP_001217836.1 | plasmid segregation protein ParM | - |
| QDW69_RS28125 (89737) | 89737..90129 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| QDW69_RS28130 (90213) | 90213..90392 | - | 180 | WP_000618104.1 | hypothetical protein | - |
| QDW69_RS28135 (90810) | 90810..91712 | + | 903 | WP_282868252.1 | DUF1281 domain-containing protein | - |
| QDW69_RS28140 (91716) | 91716..92021 | + | 306 | WP_001348080.1 | hypothetical protein | - |
| QDW69_RS28145 (92097) | 92097..92780 | + | 684 | WP_000086147.1 | DNA methylase | - |
| QDW69_RS28150 (92781) | 92781..93002 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| QDW69_RS28155 (93016) | 93016..93450 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| QDW69_RS28160 (93496) | 93496..94272 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| QDW69_RS28165 (94690) | 94690..95115 | + | 426 | WP_001198939.1 | antirestriction protein | - |
| QDW69_RS28170 (95162) | 95162..95584 | + | 423 | WP_000271705.1 | DUF1380 family protein | - |
| QDW69_RS28175 (95581) | 95581..95772 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QDW69_RS28180 (95843) | 95843..96157 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| QDW69_RS28185 (96541) | 96541..97068 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| QDW69_RS28190 (97126) | 97126..97359 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| QDW69_RS28195 (97418) | 97418..99376 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| QDW69_RS28200 (99431) | 99431..99865 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| QDW69_RS28205 (99862) | 99862..100581 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| QDW69_RS28210 (100578) | 100578..101174 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| QDW69_RS28215 (101636) | 101636..102136 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QDW69_RS28220 (102865) | 102865..103299 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QDW69_RS28225 (103393) | 103393..103659 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QDW69_RS28230 (103724) | 103724..104662 | + | 939 | WP_000078704.1 | ISNCY family transposase ISRor2 | VF |
| QDW69_RS28235 (104725) | 104725..104883 | + | 159 | WP_000150310.1 | hypothetical protein | - |
| QDW69_RS28240 (104914) | 104914..105165 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QDW69_RS28245 (105745) | 105745..106593 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| QDW69_RS28250 (106679) | 106679..107014 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QDW69_RS28255 (107247) | 107247..107579 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|