MGE detailed information
MGE type: Genomic_island MGE length: 39517 bp
Accession: NZ_CP122620 Location: 4823601..4863117 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Accession: NZ_CP122620 Location: 4823601..4863117 Organism: Escherichia coli strain ETEC4090 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDW69_RS24495 (4818922) | 4818922..4819260 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QDW69_RS24500 (4819236) | 4819236..4820933 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| QDW69_RS24505 (4820970) | 4820970..4821545 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDW69_RS24515 (4821925) | 4821925..4823187 | + | 1263 | WP_063086402.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QDW69_RS24520 (4823381) | 4823381..4823536 | + | 156 | WP_158304851.1 | transposase domain-containing protein | - |
| QDW69_RS24525 (4823568) | 4823568..4823960 | + | 393 | Protein_4798 | IS4 family transposase IS4 | Transposase |
| QDW69_RS24530 (4823970) | 4823970..4824284 | - | 315 | Protein_4799 | IS66 family transposase ISCro1 | Transposase |
| QDW69_RS24535 (4824339) | 4824339..4824782 | + | 444 | Protein_4800 | IS66 family transposase ISEc43 | Transposase |
| QDW69_RS24540 (4824917) | 4824917..4826245 | + | 1329 | WP_000019626.1 | nucleotidyltransferase | - |
| QDW69_RS24545 (4826268) | 4826268..4826828 | + | 561 | WP_224471524.1 | SLATT domain-containing protein | - |
| QDW69_RS24550 (4827380) | 4827380..4828054 | - | 675 | WP_228997564.1 | TatD family hydrolase | - |
| QDW69_RS24555 (4828102) | 4828102..4829406 | - | 1305 | WP_000192872.1 | hypothetical protein | - |
| QDW69_RS24560 (4829403) | 4829403..4830155 | - | 753 | WP_000537317.1 | hypothetical protein | - |
| QDW69_RS24565 (4830155) | 4830155..4831939 | - | 1785 | WP_000269401.1 | P-loop NTPase fold protein | - |
| QDW69_RS24570 (4832071) | 4832071..4833597 | - | 1527 | WP_282867920.1 | hypothetical protein | - |
| QDW69_RS24575 (4833836) | 4833836..4834093 | - | 258 | Protein_4808 | VasL domain-containing protein | - |
| QDW69_RS24580 (4834806) | 4834806..4834997 | + | 192 | WP_001287884.1 | DUF4222 domain-containing protein | - |
| QDW69_RS24585 (4835050) | 4835050..4835283 | - | 234 | WP_000124191.1 | hypothetical protein | - |
| QDW69_RS24590 (4835379) | 4835379..4836002 | - | 624 | WP_001364382.1 | hypothetical protein | - |
| QDW69_RS24595 (4836136) | 4836136..4836306 | - | 171 | WP_001216315.1 | hypothetical protein | - |
| QDW69_RS24600 (4836312) | 4836312..4836725 | - | 414 | WP_001013297.1 | putative zinc ribbon protein | - |
| QDW69_RS24605 (4836722) | 4836722..4837105 | - | 384 | WP_000270991.1 | putative zinc ribbon protein | - |
| QDW69_RS24610 (4837365) | 4837365..4837934 | - | 570 | WP_000148635.1 | inovirus Gp2 family protein | - |
| QDW69_RS24615 (4838138) | 4838138..4838335 | + | 198 | WP_074156802.1 | hypothetical protein | - |
| QDW69_RS24620 (4838674) | 4838674..4838886 | - | 213 | WP_000453333.1 | hemolysin expression modulator Hha | - |
| QDW69_RS24625 (4839589) | 4839589..4839795 | + | 207 | WP_001025263.1 | AlpA family transcriptional regulator | - |
| QDW69_RS24630 (4839881) | 4839881..4840453 | + | 573 | WP_001170556.1 | hypothetical protein | - |
| QDW69_RS24635 (4840568) | 4840568..4842073 | - | 1506 | WP_063086396.1 | YfjI family protein | - |
| QDW69_RS24640 (4842441) | 4842441..4842617 | - | 177 | WP_282867921.1 | hypothetical protein | - |
| QDW69_RS24645 (4843255) | 4843255..4844127 | + | 873 | WP_001069689.1 | GTPase family protein | - |
| QDW69_RS24650 (4844499) | 4844499..4847345 | + | 2847 | WP_063086393.1 | Ag43/Cah family autotransporter adhesin | - |
| QDW69_RS24655 (4847673) | 4847673..4848491 | + | 819 | WP_001234392.1 | DUF932 domain-containing protein | - |
| QDW69_RS24660 (4848583) | 4848583..4849068 | + | 486 | WP_000213706.1 | antirestriction protein | - |
| QDW69_RS24665 (4849083) | 4849083..4849559 | + | 477 | WP_001186784.1 | RadC family protein | - |
| QDW69_RS24670 (4849628) | 4849628..4849849 | + | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| QDW69_RS24675 (4849868) | 4849868..4850512 | + | 645 | WP_000086748.1 | hypothetical protein | - |
| QDW69_RS24680 (4850562) | 4850562..4850930 | + | 369 | WP_032178229.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QDW69_RS24685 (4851020) | 4851020..4851397 | + | 378 | WP_000854800.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDW69_RS24690 (4851394) | 4851394..4851882 | + | 489 | WP_000779171.1 | DUF5983 family protein | - |
| QDW69_RS24695 (4851894) | 4851894..4852091 | + | 198 | WP_001374283.1 | DUF957 domain-containing protein | - |
| QDW69_RS24700 (4852176) | 4852176..4853018 | + | 843 | WP_063086391.1 | DUF4942 domain-containing protein | - |
| QDW69_RS24705 (4853767) | 4853767..4855305 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDW69_RS24710 (4855670) | 4855670..4857004 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDW69_RS24715 (4857084) | 4857084..4859231 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDW69_RS24720 (4859290) | 4859290..4860747 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QDW69_RS24725 (4860984) | 4860984..4862501 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDW69_RS24730 (4862620) | 4862620..4862793 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDW69_RS24735 (4862821) | 4862821..4863117 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDW69_RS24740 (4863344) | 4863344..4863616 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QDW69_RS24745 (4863628) | 4863628..4863858 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDW69_RS24750 (4864039) | 4864039..4865670 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| QDW69_RS24755 (4865667) | 4865667..4866386 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|