MGE detailed information
MGE type: Genomic_island MGE length: 43853 bp
Accession: NZ_CP122600 Location: 4558000..4601852 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Accession: NZ_CP122600 Location: 4558000..4601852 Organism: Escherichia coli strain ETEC6333 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QDX83_RS22500 (4553005) | 4553005..4554702 | + | 1698 | WP_000068919.1 | protein-disulfide reductase DsbD | - |
| QDX83_RS22505 (4554739) | 4554739..4555314 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QDX83_RS22515 (4555694) | 4555694..4556959 | + | 1266 | WP_001218821.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QDX83_RS22520 (4557822) | 4557822..4558010 | + | 189 | WP_001051770.1 | hypothetical protein | - |
| QDX83_RS22525 (4558000) | 4558000..4559625 | + | 1626 | WP_000668951.1 | N-6 DNA methylase | - |
| QDX83_RS22530 (4559695) | 4559695..4562691 | - | 2997 | WP_001034306.1 | Eco57I restriction-modification methylase domain-containing protein | - |
| QDX83_RS22535 (4562967) | 4562967..4563131 | - | 165 | WP_194244553.1 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| QDX83_RS22540 (4563377) | 4563377..4564663 | - | 1287 | WP_000005571.1 | McrC family protein | - |
| QDX83_RS22545 (4564656) | 4564656..4566712 | - | 2057 | Protein_4414 | AAA family ATPase | - |
| QDX83_RS22550 (4567594) | 4567594..4568765 | + | 1172 | WP_282832828.1 | IS3 family transposase ISCfr6 | Transposase |
| QDX83_RS22555 (4568792) | 4568792..4570405 | - | 1614 | WP_000080200.1 | IS66 family transposase ISEc23 | Transposase |
| QDX83_RS22560 (4570436) | 4570436..4570786 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QDX83_RS22565 (4570783) | 4570783..4571208 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QDX83_RS22570 (4571290) | 4571290..4571694 | - | 405 | WP_282832830.1 | putative zinc ribbon protein | - |
| QDX83_RS22575 (4571691) | 4571691..4572074 | - | 384 | WP_000271029.1 | putative zinc ribbon protein | - |
| QDX83_RS22580 (4572334) | 4572334..4572903 | - | 570 | WP_000220726.1 | inovirus Gp2 family protein | - |
| QDX83_RS22585 (4573107) | 4573107..4573280 | + | 174 | WP_001387062.1 | hypothetical protein | - |
| QDX83_RS22590 (4573520) | 4573520..4573669 | - | 150 | WP_071776717.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QDX83_RS22595 (4574432) | 4574432..4574638 | + | 207 | WP_001095911.1 | AlpA family transcriptional regulator | - |
| QDX83_RS22600 (4574726) | 4574726..4575334 | + | 609 | WP_071776716.1 | hypothetical protein | - |
| QDX83_RS22605 (4576774) | 4576774..4577796 | + | 1023 | WP_001384106.1 | hypothetical protein | - |
| QDX83_RS22610 (4577880) | 4577880..4578752 | + | 873 | WP_096111351.1 | GTPase family protein | - |
| QDX83_RS22615 (4579124) | 4579124..4581970 | + | 2847 | WP_097423229.1 | Ag43/Cah family autotransporter adhesin | - |
| QDX83_RS22620 (4582041) | 4582041..4582274 | + | 234 | WP_001117561.1 | DUF905 family protein | - |
| QDX83_RS22625 (4582374) | 4582374..4583192 | + | 819 | WP_001234706.1 | DUF932 domain-containing protein | - |
| QDX83_RS22630 (4583284) | 4583284..4583769 | + | 486 | WP_000206661.1 | antirestriction protein | - |
| QDX83_RS22635 (4583784) | 4583784..4584260 | + | 477 | WP_001186710.1 | RadC family protein | - |
| QDX83_RS22640 (4584329) | 4584329..4584550 | + | 222 | WP_000692293.1 | DUF987 domain-containing protein | - |
| QDX83_RS22645 (4584564) | 4584564..4585208 | + | 645 | WP_001079776.1 | hypothetical protein | - |
| QDX83_RS22650 (4585258) | 4585258..4585626 | + | 369 | WP_024210939.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QDX83_RS22655 (4585716) | 4585716..4586093 | + | 378 | WP_001094449.1 | TA system toxin CbtA family protein | Toxin Detail |
| QDX83_RS22660 (4586090) | 4586090..4586239 | + | 150 | Protein_4437 | DUF5983 family protein | - |
| QDX83_RS22665 (4586315) | 4586315..4586512 | + | 198 | WP_087891818.1 | DUF957 domain-containing protein | - |
| QDX83_RS22670 (4586597) | 4586597..4587229 | + | 633 | Protein_4439 | DUF4942 domain-containing protein | - |
| QDX83_RS22680 (4588560) | 4588560..4588778 | + | 219 | Protein_4441 | DUF4942 domain-containing protein | - |
| QDX83_RS22685 (4588849) | 4588849..4589709 | + | 861 | WP_282953998.1 | CSS-motif domain-containing protein | - |
| QDX83_RS22690 (4589735) | 4589735..4590948 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| QDX83_RS22695 (4591003) | 4591003..4591698 | + | 696 | Protein_4444 | hypothetical protein | VF |
| QDX83_RS22700 (4592501) | 4592501..4594039 | + | 1539 | WP_001187196.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QDX83_RS22705 (4594405) | 4594405..4595739 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QDX83_RS22710 (4595819) | 4595819..4597966 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QDX83_RS22715 (4598025) | 4598025..4599482 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| QDX83_RS22720 (4599719) | 4599719..4601236 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QDX83_RS22725 (4601355) | 4601355..4601528 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QDX83_RS22730 (4601556) | 4601556..4601852 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QDX83_RS22735 (4602079) | 4602079..4602351 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QDX83_RS22740 (4602363) | 4602363..4602593 | - | 231 | WP_001550470.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QDX83_RS22745 (4602773) | 4602773..4604404 | + | 1632 | WP_001216482.1 | sensor histidine kinase | - |
| QDX83_RS22750 (4604401) | 4604401..4605120 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|