MGE detailed information
MGE type: Genomic_island MGE length: 35981 bp
Accession: NZ_CP122507 Location: 4246454..4282434 Organism: Escherichia coli strain W444 Replicon: chromosome
Accession: NZ_CP122507 Location: 4246454..4282434 Organism: Escherichia coli strain W444 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QC806_RS20860 (4243116) | 4243116..4245368 | - | 2253 | Protein_4076 | DUF1998 domain-containing protein | - |
| QC806_RS20865 (4245436) | 4245436..4246416 | + | 981 | WP_063114650.1 | IS5-like element ISKpn26 family transposase | - |
| QC806_RS20870 (4246454) | 4246454..4246924 | - | 471 | WP_232936827.1 | hypothetical protein | - |
| QC806_RS20875 (4247344) | 4247344..4248081 | - | 738 | WP_001389182.1 | OmpW family outer membrane protein | - |
| QC806_RS20880 (4248448) | 4248448..4248789 | + | 342 | Protein_4080 | IS3 family transposase ISEc31 | Transposase |
| QC806_RS20885 (4249462) | 4249462..4250970 | + | 1509 | WP_032347722.1 | group II intron reverse transcriptase/maturase | - |
| QC806_RS20890 (4251051) | 4251051..4251539 | + | 489 | Protein_4082 | IS3 family transposase | - |
| QC806_RS20895 (4251547) | 4251547..4251648 | - | 102 | Protein_4083 | hypothetical protein | - |
| QC806_RS20900 (4251718) | 4251718..4252341 | - | 624 | WP_042850840.1 | hypothetical protein | - |
| QC806_RS20905 (4252430) | 4252430..4252807 | - | 378 | WP_088569161.1 | hypothetical protein | - |
| QC806_RS20910 (4252901) | 4252901..4253305 | + | 405 | WP_000839182.1 | IS66 family transposase ISKpn24 | Transposase |
| QC806_RS20915 (4253302) | 4253302..4253649 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QC806_RS20920 (4253698) | 4253698..4255236 | + | 1539 | WP_152914964.1 | IS66 family transposase ISKpn24 | Transposase |
| QC806_RS20925 (4255273) | 4255273..4255392 | - | 120 | Protein_4089 | hypothetical protein | - |
| QC806_RS20930 (4255660) | 4255660..4255890 | - | 231 | WP_032216528.1 | AlpA family transcriptional regulator | - |
| QC806_RS20935 (4255959) | 4255959..4256519 | - | 561 | WP_032216519.1 | hypothetical protein | - |
| QC806_RS20940 (4256777) | 4256777..4257343 | - | 567 | WP_001126818.1 | inovirus-type Gp2 protein | - |
| QC806_RS20945 (4258883) | 4258883..4260487 | - | 1605 | WP_001083419.1 | YfjI family protein | - |
| QC806_RS20950 (4260814) | 4260814..4261545 | - | 732 | WP_063073420.1 | inovirus Gp2 family protein | - |
| QC806_RS20955 (4263103) | 4263103..4264233 | - | 1131 | WP_000147749.1 | hypothetical protein | - |
| QC806_RS20960 (4264418) | 4264418..4265302 | + | 885 | WP_000010408.1 | 50S ribosome-binding GTPase | - |
| QC806_RS20965 (4265505) | 4265505..4266185 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QC806_RS20970 (4266333) | 4266333..4267010 | + | 678 | WP_063073422.1 | hypothetical protein | - |
| QC806_RS20975 (4267016) | 4267016..4267168 | + | 153 | WP_001696589.1 | DUF905 family protein | - |
| QC806_RS20980 (4267269) | 4267269..4268087 | + | 819 | WP_096211214.1 | DUF932 domain-containing protein | - |
| QC806_RS20985 (4268179) | 4268179..4268664 | + | 486 | WP_000213716.1 | antirestriction protein | - |
| QC806_RS20990 (4268680) | 4268680..4269156 | + | 477 | WP_001186780.1 | RadC family protein | - |
| QC806_RS20995 (4269219) | 4269219..4269440 | + | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| QC806_RS21000 (4269459) | 4269459..4270103 | + | 645 | WP_045146861.1 | hypothetical protein | - |
| QC806_RS21005 (4270153) | 4270153..4270521 | + | 369 | WP_063112944.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QC806_RS21010 (4270611) | 4270611..4270988 | + | 378 | WP_057109034.1 | TA system toxin CbtA family protein | Toxin Detail |
| QC806_RS21015 (4270985) | 4270985..4271134 | + | 150 | Protein_4107 | DUF5983 family protein | - |
| QC806_RS21020 (4271210) | 4271210..4271407 | + | 198 | WP_023563519.1 | DUF957 domain-containing protein | - |
| QC806_RS21025 (4271492) | 4271492..4272334 | + | 843 | WP_001529559.1 | DUF4942 domain-containing protein | - |
| QC806_RS21030 (4273083) | 4273083..4274621 | + | 1539 | WP_072665252.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QC806_RS21035 (4274987) | 4274987..4276321 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QC806_RS21040 (4276401) | 4276401..4278548 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QC806_RS21045 (4278607) | 4278607..4280064 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QC806_RS21050 (4280301) | 4280301..4281818 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QC806_RS21055 (4281937) | 4281937..4282110 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QC806_RS21060 (4282138) | 4282138..4282434 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QC806_RS21065 (4282661) | 4282661..4282933 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QC806_RS21070 (4282945) | 4282945..4283175 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QC806_RS21075 (4283356) | 4283356..4284987 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| QC806_RS21080 (4284984) | 4284984..4285703 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|