MGE detailed information
MGE type: Genomic_island MGE length: 10426 bp
Accession: NZ_CP122457 Location: 1003547..1013972 Organism: Salmonella enterica subsp. enterica strain TZ282 Replicon: chromosome
Accession: NZ_CP122457 Location: 1003547..1013972 Organism: Salmonella enterica subsp. enterica strain TZ282 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCX26_RS04750 (1000157) | 1000157..1000555 | + | 399 | Protein_930 | cytoplasmic protein | - |
| QCX26_RS04755 (1000746) | 1000746..1000985 | + | 240 | Protein_931 | hypothetical protein | - |
| QCX26_RS04760 (1001142) | 1001142..1001810 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| QCX26_RS04765 (1001837) | 1001837..1002331 | + | 495 | WP_080184759.1 | hypothetical protein | - |
| QCX26_RS04770 (1002503) | 1002503..1003159 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| QCX26_RS04775 (1003518) | 1003518..1003723 | + | 206 | Protein_935 | IS5 family transposase ISEcl3 | Transposase |
| QCX26_RS04780 (1003796) | 1003796..1004323 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QCX26_RS04785 (1004320) | 1004320..1004610 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QCX26_RS04790 (1004880) | 1004880..1005069 | - | 190 | Protein_938 | IS3 family transposase | - |
| QCX26_RS04795 (1005310) | 1005310..1005636 | + | 327 | WP_050067855.1 | hypothetical protein | - |
| QCX26_RS04800 (1005909) | 1005909..1006256 | - | 348 | WP_001555786.1 | DUF1493 family protein | - |
| QCX26_RS04805 (1006241) | 1006241..1006690 | - | 450 | WP_000381616.1 | hypothetical protein | - |
| QCX26_RS04810 (1007109) | 1007109..1007552 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| QCX26_RS04815 (1008009) | 1008009..1008659 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| QCX26_RS04820 (1008656) | 1008656..1010344 | + | 1689 | WP_000848102.1 | Type 3 secretion system secretin | VF |
| QCX26_RS04825 (1010341) | 1010341..1011459 | + | 1119 | WP_000612166.1 | Protein MxiC | VF |
| QCX26_RS04830 (1011484) | 1011484..1013541 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| QCX26_RS04835 (1013565) | 1013565..1013972 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| QCX26_RS04840 (1013969) | 1013969..1015264 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| QCX26_RS04845 (1015242) | 1015242..1015685 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| QCX26_RS04850 (1015685) | 1015685..1016695 | + | 1011 | WP_283880529.1 | SPI-1 type III secretion system protein SpaN | - |
| QCX26_RS04855 (1016695) | 1016695..1017606 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| QCX26_RS04860 (1017596) | 1017596..1018270 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| QCX26_RS04865 (1018296) | 1018296..1018556 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |