MGE detailed information
MGE type: Conjugative plasmid MGE length: 91257 bp
Accession: NZ_CP122450 Location: 1..91257 Organism: Escherichia coli strain 85.0412 Replicon: plasmid p2
Accession: NZ_CP122450 Location: 1..91257 Organism: Escherichia coli strain 85.0412 Replicon: plasmid p2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QBY77_RS25330 (1) | 1..858 | + | 858 | WP_050947965.1 | incFII family plasmid replication initiator RepA | - |
| QBY77_RS25335 (1868) | 1868..2131 | + | 264 | WP_016241862.1 | hypothetical protein | - |
| QBY77_RS25340 (2121) | 2121..2420 | + | 300 | WP_016241863.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QBY77_RS25345 (2561) | 2561..3538 | + | 978 | WP_050947967.1 | DUF4238 domain-containing protein | - |
| QBY77_RS25350 (3906) | 3906..4190 | + | 285 | WP_044864180.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| QBY77_RS25355 (4190) | 4190..4465 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QBY77_RS25360 (4563) | 4563..4766 | + | 204 | Protein_6 | hypothetical protein | - |
| QBY77_RS25365 (5026) | 5026..8157 | + | 3132 | WP_044864181.1 | hypothetical protein | - |
| QBY77_RS25370 (8502) | 8502..9338 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QBY77_RS25375 (9338) | 9338..10141 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QBY77_RS25380 (10427) | 10427..11635 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| QBY77_RS25385 (11651) | 11651..11770 | - | 120 | Protein_11 | LysR family transcriptional regulator | - |
| QBY77_RS25390 (12001) | 12001..13206 | - | 1206 | WP_000599533.1 | sodium/glutamate symporter | - |
| QBY77_RS25395 (13650) | 13650..13970 | + | 321 | WP_000562370.1 | antibiotic biosynthesis monooxygenase | - |
| QBY77_RS25400 (13963) | 13963..14349 | + | 387 | WP_000460651.1 | hypothetical protein | - |
| QBY77_RS25405 (14357) | 14357..15043 | + | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| QBY77_RS25410 (15021) | 15021..15644 | - | 624 | WP_000088607.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QBY77_RS25415 (15726) | 15726..16931 | + | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QBY77_RS25420 (17044) | 17044..17637 | - | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QBY77_RS25425 (17725) | 17725..18141 | + | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| QBY77_RS25430 (18151) | 18151..19104 | - | 954 | Protein_20 | IS4 family transposase IS10R | Transposase |
| QBY77_RS25435 (19139) | 19139..22144 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QBY77_RS25440 (22308) | 22308..22865 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QBY77_RS25445 (23048) | 23048..23908 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QBY77_RS25450 (24057) | 24057..24314 | - | 258 | Protein_24 | IS4 family transposase IS10R | Transposase |
| QBY77_RS25455 (24384) | 24384..25315 | - | 932 | Protein_25 | IS3 family transposase IS1133 | Transposase |
| QBY77_RS25460 (25348) | 25348..26316 | + | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| QBY77_RS25465 (26373) | 26373..26579 | - | 207 | Protein_27 | IS3 family transposase IS1133 | Transposase |
| QBY77_RS25470 (26610) | 26610..27233 | - | 624 | WP_000904897.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| QBY77_RS25475 (27359) | 27359..30244 | + | 2886 | WP_001138082.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QBY77_RS25480 (30569) | 30569..30982 | + | 414 | WP_042110548.1 | hypothetical protein | - |
| QBY77_RS25485 (30984) | 30984..31766 | + | 783 | WP_023352052.1 | site-specific integrase | - |
| QBY77_RS25490 (31938) | 31938..32291 | + | 354 | WP_000864814.1 | colicin M immunity protein | - |
| QBY77_RS25495 (32341) | 32341..33156 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| QBY77_RS25500 (33400) | 33400..33927 | + | 528 | WP_021561684.1 | colicin B immunity protein | - |
| QBY77_RS25505 (33945) | 33945..35480 | - | 1536 | WP_001282377.1 | pore-forming bacteriocin colicin B | - |
| QBY77_RS25510 (35922) | 35922..36434 | + | 513 | WP_021561682.1 | hypothetical protein | - |
| QBY77_RS25515 (36586) | 36586..36936 | - | 351 | WP_024185881.1 | plasmid partitioning/stability family protein | - |
| QBY77_RS25520 (36939) | 36939..37901 | - | 963 | WP_000959879.1 | plasmid segregation protein ParM | - |
| QBY77_RS25525 (38105) | 38105..38416 | + | 312 | WP_064770523.1 | hypothetical protein | - |
| QBY77_RS25530 (38493) | 38493..39176 | + | 684 | WP_000085940.1 | DNA methylase | - |
| QBY77_RS25535 (39177) | 39177..39398 | + | 222 | WP_001104866.1 | hypothetical protein | - |
| QBY77_RS25540 (39292) | 39292..39847 | + | 556 | Protein_42 | DUF1380 family protein | - |
| QBY77_RS25545 (39892) | 39892..40662 | + | 771 | WP_050947971.1 | hypothetical protein | - |
| QBY77_RS25550 (41076) | 41076..41501 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| QBY77_RS25555 (41548) | 41548..41970 | + | 423 | WP_050947973.1 | DUF1380 family protein | - |
| QBY77_RS25560 (41967) | 41967..42158 | + | 192 | WP_001027519.1 | hypothetical protein | - |
| QBY77_RS25565 (42430) | 42430..42678 | - | 249 | WP_071535686.1 | hypothetical protein | - |
| QBY77_RS25570 (43196) | 43196..43426 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QBY77_RS25575 (43478) | 43478..44839 | + | 1362 | WP_047414123.1 | DUF3560 domain-containing protein | - |
| QBY77_RS25580 (44886) | 44886..45449 | + | 564 | WP_001377760.1 | class I SAM-dependent methyltransferase | - |
| QBY77_RS25585 (45601) | 45601..45864 | + | 264 | WP_071781663.1 | hypothetical protein | - |
| QBY77_RS25590 (46105) | 46105..46311 | + | 207 | WP_000547971.1 | hypothetical protein | - |
| QBY77_RS25595 (46337) | 46337..46876 | + | 540 | WP_000290812.1 | single-stranded DNA-binding protein | - |
| QBY77_RS25600 (46938) | 46938..47171 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| QBY77_RS25605 (47236) | 47236..49194 | + | 1959 | WP_000117212.1 | ParB/RepB/Spo0J family partition protein | - |
| QBY77_RS25610 (49249) | 49249..49683 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| QBY77_RS25615 (49680) | 49680..50442 | + | 763 | Protein_57 | plasmid SOS inhibition protein A | - |
| QBY77_RS25620 (50411) | 50411..50599 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - (50568) | 50568..50633 | + | 66 | NuclAT_1 | - | - |
| - (50411) | 50411..50635 | + | 225 | NuclAT_0 | - | - |
| - (50411) | 50411..50635 | + | 225 | NuclAT_0 | - | - |
| - (50411) | 50411..50635 | + | 225 | NuclAT_0 | - | - |
| - (50411) | 50411..50635 | + | 225 | NuclAT_0 | - | - |
| - (50411) | 50411..50635 | - | 225 | NuclAT_0 | - | - |
| QBY77_RS25625 (50621) | 50621..50770 | + | 150 | Protein_59 | plasmid maintenance protein Mok | - |
| QBY77_RS25630 (50712) | 50712..50837 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QBY77_RS25635 (51057) | 51057..51287 | + | 231 | WP_074158030.1 | hypothetical protein | - |
| QBY77_RS25640 (51285) | 51285..51458 | - | 174 | Protein_62 | hypothetical protein | - |
| QBY77_RS25645 (51759) | 51759..52046 | + | 288 | WP_000107520.1 | hypothetical protein | - |
| QBY77_RS25650 (52165) | 52165..52986 | + | 822 | WP_001234468.1 | DUF932 domain-containing protein | - |
| QBY77_RS25655 (53282) | 53282..53791 | - | 510 | WP_000759163.1 | hypothetical protein | VF |
| QBY77_RS25660 (54206) | 54206..54589 | + | 384 | WP_000124979.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QBY77_RS25665 (54780) | 54780..55466 | + | 687 | WP_000332493.1 | PAS domain-containing protein | - |
| QBY77_RS25670 (55560) | 55560..55787 | + | 228 | WP_001254385.1 | conjugal transfer relaxosome protein TraY | - |
| QBY77_RS25675 (55821) | 55821..56180 | + | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| QBY77_RS25680 (56195) | 56195..56506 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QBY77_RS25685 (56528) | 56528..57094 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QBY77_RS25690 (57081) | 57081..57809 | + | 729 | WP_001230796.1 | type-F conjugative transfer system secretin TraK | - |
| QBY77_RS25695 (57809) | 57809..59236 | + | 1428 | WP_000146658.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QBY77_RS25700 (59226) | 59226..59816 | + | 591 | WP_000002789.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QBY77_RS25705 (59803) | 59803..60123 | + | 321 | WP_001057279.1 | conjugal transfer protein TrbD | - |
| QBY77_RS25710 (60116) | 60116..60367 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| QBY77_RS25715 (60364) | 60364..60879 | + | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QBY77_RS25720 (61014) | 61014..61235 | + | 222 | WP_001278696.1 | conjugal transfer protein TraR | - |
| QBY77_RS25725 (61228) | 61228..61641 | + | 414 | WP_000549581.1 | hypothetical protein | - |
| QBY77_RS25730 (61634) | 61634..62107 | + | 474 | WP_000549572.1 | hypothetical protein | - |
| QBY77_RS25735 (62186) | 62186..62402 | + | 217 | Protein_81 | hypothetical protein | - |
| QBY77_RS25740 (62403) | 62403..62714 | + | 312 | WP_000141580.1 | hypothetical protein | - |
| QBY77_RS25745 (62784) | 62784..63146 | + | 363 | WP_000835374.1 | hypothetical protein | - |
| QBY77_RS25750 (63272) | 63272..65902 | + | 2631 | WP_000069740.1 | type IV secretion system protein TraC | - |
| QBY77_RS25755 (65899) | 65899..66285 | + | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| QBY77_RS25760 (66282) | 66282..66914 | + | 633 | WP_001203714.1 | type-F conjugative transfer system protein TraW | - |
| QBY77_RS25765 (66911) | 66911..67903 | + | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| QBY77_RS25770 (67929) | 67929..68390 | + | 462 | WP_000277845.1 | hypothetical protein | - |
| QBY77_RS25775 (68420) | 68420..68872 | + | 453 | WP_000069428.1 | hypothetical protein | - |
| QBY77_RS25780 (68900) | 68900..69538 | + | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QBY77_RS25785 (69535) | 69535..71343 | + | 1809 | WP_000821816.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QBY77_RS25790 (71370) | 71370..71627 | + | 258 | WP_000864328.1 | conjugal transfer protein TrbE | - |
| QBY77_RS25795 (71620) | 71620..72363 | + | 744 | WP_001030391.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QBY77_RS25800 (72379) | 72379..72726 | + | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QBY77_RS25805 (72845) | 72845..73129 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QBY77_RS25810 (73116) | 73116..73661 | + | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QBY77_RS25815 (73591) | 73591..73953 | + | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| QBY77_RS25820 (73953) | 73953..75326 | + | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QBY77_RS25825 (75323) | 75323..78148 | + | 2826 | WP_001007030.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QBY77_RS25830 (78145) | 78145..78654 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QBY77_RS25835 (78668) | 78668..79399 | + | 732 | WP_000850424.1 | conjugal transfer complement resistance protein TraT | - |
| QBY77_RS25840 (79652) | 79652..81877 | + | 2226 | WP_000009363.1 | type IV conjugative transfer system coupling protein TraD | - |
| QBY77_RS25845 (81877) | 81877..87147 | + | 5271 | WP_283154802.1 | Multifunctional conjugation protein TraI | Relaxase |
| QBY77_RS25850 (87167) | 87167..87913 | + | 747 | WP_050947963.1 | conjugal transfer pilus acetylase TraX | - |
| QBY77_RS25855 (87968) | 87968..88528 | + | 561 | WP_033803061.1 | fertility inhibition protein FinO | - |
| QBY77_RS25860 (88664) | 88664..88876 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| QBY77_RS25865 (89122) | 89122..89583 | + | 462 | WP_000978818.1 | thermonuclease family protein | - |
| QBY77_RS25870 (89629) | 89629..89838 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| QBY77_RS25875 (89877) | 89877..90467 | + | 591 | WP_024228807.1 | DUF2726 domain-containing protein | - |
| QBY77_RS25880 (90707) | 90707..90967 | + | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|