NZ_CP1223261..178621

MGE detailed information

MGE type: Mobilizable plasmid        MGE length: 178621 bp
Accession: NZ_CP122326        Location: 1..178621         Organism: Pantoea agglomerans pv. betae strain 4188       Replicon: plasmid pPAB03


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A7P61_RS02585 (A7P61_02585) 1..1074 + 1074 WP_031593098.1 RepB family plasmid replication initiator protein -
A7P61_RS02590 (A7P61_02590) 2397..3584 - 1188 WP_064703115.1 diguanylate phosphodiesterase -
A7P61_RS02595 (A7P61_02595) 3836..4045 - 210 WP_031593096.1 DUF1471 domain-containing protein -
A7P61_RS02600 (A7P61_02600) 4247..6031 - 1785 WP_064703116.1 GGDEF and EAL domain-containing protein -
A7P61_RS02605 (A7P61_02605) 6551..6775 - 225 WP_010256955.1 DUF3606 domain-containing protein -
A7P61_RS02610 (A7P61_02610) 7145..7384 + 240 WP_022624236.1 hypothetical protein -
A7P61_RS02615 (A7P61_02615) 7560..8048 + 489 WP_064703117.1 Hsp20 family protein -
A7P61_RS02620 (A7P61_02620) 8121..8885 - 765 WP_064703118.1 MerR family transcriptional regulator -
A7P61_RS02625 (A7P61_02625) 9081..9290 - 210 WP_010256969.1 CsbD family protein -
A7P61_RS02630 (A7P61_02630) 9450..10679 - 1230 WP_064703119.1 diguanylate phosphodiesterase -
A7P61_RS02635 (A7P61_02635) 11635..11868 + 234 WP_060678836.1 hypothetical protein -
A7P61_RS02640 (A7P61_02640) 11944..12273 - 330 WP_031593089.1 hypothetical protein -
A7P61_RS02645 (A7P61_02645) 12912..14570 + 1659 WP_064703120.1 hypothetical protein VF
A7P61_RS02650 (A7P61_02650) 15171..17096 + 1926 WP_064703121.1 hypothetical protein VF
A7P61_RS02655 (A7P61_02655) 17152..17964 - 813 WP_064703122.1 hypothetical protein -
A7P61_RS02660 (A7P61_02660) 18042..19157 - 1116 WP_064703123.1 metallophosphoesterase -
A7P61_RS02665 (A7P61_02665) 19395..21722 - 2328 WP_064703124.1 FdhF/YdeP family oxidoreductase -
A7P61_RS02670 (A7P61_02670) 22077..22520 + 444 WP_064703141.1 cyclophilin-like fold protein -
A7P61_RS02675 (A7P61_02675) 22694..23041 - 348 WP_003850685.1 HNH nuclease YajD -
A7P61_RS02680 (A7P61_02680) 23376..23543 - 168 WP_009093121.1 hypothetical protein -
A7P61_RS02685 (A7P61_02685) 23834..26938 + 3105 WP_064703125.1 Multidrug efflux pump subunit AcrB VF
A7P61_RS02690 (A7P61_02690) 26998..28023 - 1026 WP_031593079.1 alpha/beta hydrolase -
A7P61_RS02695 (A7P61_02695) 28092..29216 - 1125 WP_081273776.1 MFS transporter -
A7P61_RS02700 (A7P61_02700) 29419..30315 + 897 WP_064703127.1 LysR family transcriptional regulator -
A7P61_RS02705 (A7P61_02705) 30379..30555 - 177 WP_074399946.1 general stress protein -
A7P61_RS02710 (A7P61_02710) 30757..31053 + 297 WP_064703128.1 hypothetical protein -
A7P61_RS02715 (A7P61_02715) 31098..31385 - 288 WP_031593074.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
A7P61_RS02720 (A7P61_02720) 31385..31624 - 240 WP_064703129.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
A7P61_RS02725 (A7P61_02725) 31965..33938 + 1974 WP_064703130.1 hypothetical protein VF
A7P61_RS02730 (A7P61_02730) 34043..35059 + 1017 WP_039387390.1 NAD(P)-dependent alcohol dehydrogenase -
A7P61_RS02735 (A7P61_02735) 35109..35777 - 669 WP_064703131.1 DUF2268 domain-containing putative Zn-dependent protease -
A7P61_RS02740 (A7P61_02740) 36128..36907 + 780 WP_039387394.1 MBL fold metallo-hydrolase -
A7P61_RS02745 (A7P61_02745) 36982..37974 + 993 WP_064703132.1 HTH-type transcriptional regulator CdhR VF
A7P61_RS02750 (A7P61_02750) 38066..38467 - 402 WP_064703133.1 H-NS family nucleoid-associated regulatory protein -
A7P61_RS02755 (A7P61_02755) 38743..40305 + 1563 WP_064703134.1 hypothetical protein VF
A7P61_RS02760 (A7P61_02760) 40374..40820 + 447 WP_031593775.1 VOC family protein -
A7P61_RS02765 (A7P61_02765) 41048..41449 - 402 WP_010257055.1 H-NS family nucleoid-associated regulatory protein -
A7P61_RS02770 (A7P61_02770) 42629..42808 + 180 WP_071941192.1 DUF2256 domain-containing protein -
A7P61_RS02775 (A7P61_02775) 42861..43163 - 303 WP_031593776.1 hypothetical protein -
A7P61_RS02780 (A7P61_02780) 43276..43818 - 543 WP_064703135.1 YfaZ family outer membrane protein -
A7P61_RS02785 (A7P61_02785) 43882..44118 - 237 WP_031593778.1 YgdI/YgdR family lipoprotein -
A7P61_RS02790 (A7P61_02790) 44492..44911 + 420 WP_074399947.1 DUF1090 family protein -
A7P61_RS02795 (A7P61_02795) 45588..45968 + 381 WP_064703136.1 YgiW/YdeI family stress tolerance OB fold protein -
A7P61_RS02800 (A7P61_02800) 46402..46872 - 471 WP_064703137.1 WbuC family cupin fold metalloprotein -
A7P61_RS02805 (A7P61_02805) 47211..47435 + 225 WP_031593784.1 FeoA domain-containing protein -
A7P61_RS02810 (A7P61_02810) 47435..49762 + 2328 WP_064703138.1 Fe(2+) transporter FeoB VF
A7P61_RS02815 (A7P61_02815) 49888..50772 - 885 Protein_46 alpha/beta hydrolase -
A7P61_RS02820 (A7P61_02820) 51195..51836 - 642 WP_283833877.1 hypothetical protein -
A7P61_RS02825 (A7P61_02825) 52176..52354 + 179 Protein_48 DUF6500 family protein -
A7P61_RS02830 (A7P61_02830) 52360..53007 - 648 WP_064704006.1 Tn3 family transposase TnpR_TnEc1 Transposase
A7P61_RS02835 (A7P61_02835) 53176..56162 + 2987 Protein_50 Tn3 family transposase TnpA_TnEc1 Transposase
A7P61_RS02840 (A7P61_02840) 56874..57392 + 519 WP_064703440.1 amidohydrolase family protein -
A7P61_RS02845 (A7P61_02845) 57842..58879 - 1038 WP_064703442.1 tyrosine-type recombinase/integrase -
A7P61_RS02850 (A7P61_02850) 59827..60297 + 471 WP_064703443.1 SgcJ/EcaC family oxidoreductase -
A7P61_RS02855 (A7P61_02855) 60597..61814 - 1218 WP_064703444.1 monooxygenase -
A7P61_RS02860 (A7P61_02860) 61807..63267 - 1461 WP_064703445.1 MFS transporter -
A7P61_RS02865 (A7P61_02865) 63379..63558 - 180 WP_155740504.1 hypothetical protein -
A7P61_RS02870 (A7P61_02870) 63627..65036 - 1410 WP_064703446.1 LLM class flavin-dependent oxidoreductase -
A7P61_RS02875 (A7P61_02875) 65105..66517 - 1413 WP_064703447.1 FAD-dependent oxidoreductase -
A7P61_RS02880 (A7P61_02880) 66537..67709 - 1173 WP_064703448.1 FMNH2-dependent alkanesulfonate monooxygenase -
A7P61_RS02885 (A7P61_02885) 67984..69873 + 1890 WP_064703449.1 Anaerobic nitric oxide reductase transcription regulator NorR VF
A7P61_RS02890 (A7P61_02890) 69969..70919 + 951 WP_064703450.1 sulfonate ABC transporter substrate-binding protein -
A7P61_RS02895 (A7P61_02895) 71233..71502 - 270 WP_064703451.1 DUF1471 family periplasmic protein YahO -
A7P61_RS02900 (A7P61_02900) 71775..72911 - 1137 WP_064703452.1 HlyD family secretion protein -
A7P61_RS02905 (A7P61_02905) 72913..73239 - 327 WP_064703453.1 DUF3302 domain-containing protein -
A7P61_RS02910 (A7P61_02910) 73833..75485 + 1653 WP_064703454.1 intermembrane transport protein PqiB -
A7P61_RS02915 (A7P61_02915) 75626..75877 + 252 WP_064703455.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
A7P61_RS02920 (A7P61_02920) 75874..76161 + 288 WP_010257115.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
A7P61_RS02925 (A7P61_02925) 76524..76838 + 315 WP_031593845.1 hypothetical protein -
A7P61_RS02930 (A7P61_02930) 76835..77653 - 819 WP_064703456.1 DUF4225 domain-containing protein -
A7P61_RS02935 (A7P61_02935) 77989..78684 + 696 WP_064703457.1 haloacid dehalogenase type II -
A7P61_RS02940 (A7P61_02940) 78722..80251 - 1530 WP_064703458.1 Fic family protein -
A7P61_RS02945 (A7P61_02945) 80398..80763 - 366 WP_064703459.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF -
A7P61_RS02950 (A7P61_02950) 80760..81080 - 321 WP_022624286.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE -
A7P61_RS02955 (A7P61_02955) 81080..82747 - 1668 WP_064703460.1 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase -
A7P61_RS02960 (A7P61_02960) 82747..83649 - 903 WP_064703461.1 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase -
A7P61_RS02965 (A7P61_02965) 83649..85628 - 1980 WP_064703462.1 Bifunctional polymyxin resistance protein ArnA VF
A7P61_RS02970 (A7P61_02970) 85625..86608 - 984 WP_064703463.1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase VF
A7P61_RS02975 (A7P61_02975) 86610..87746 - 1137 WP_064703464.1 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase VF
A7P61_RS02980 (A7P61_02980) 88443..89021 + 579 WP_064703471.1 YceI family protein -
A7P61_RS02985 (A7P61_02985) 89048..89833 - 786 WP_064703465.1 hypothetical protein -
A7P61_RS02990 (A7P61_02990) 89830..90330 - 501 WP_081273789.1 sigma-70 family RNA polymerase sigma factor -
A7P61_RS02995 (A7P61_02995) 90367..90903 - 537 WP_064703467.1 tetratricopeptide repeat protein -
A7P61_RS03000 (A7P61_03000) 91047..92060 - 1014 WP_064703468.1 Gfo/Idh/MocA family oxidoreductase -
A7P61_RS03005 (A7P61_03005) 92169..93179 + 1011 WP_031593860.1 LacI family DNA-binding transcriptional regulator -
A7P61_RS03010 (A7P61_03010) 93813..94265 + 453 WP_064703470.1 PACE efflux transporter -
A7P61_RS03015 (A7P61_03015) 94496..94699 + 204 WP_031593862.1 Hha/YmoA family nucleoid-associated regulatory protein -
A7P61_RS03020 (A7P61_03020) 94880..99076 - 4197 WP_283833876.1 S6 family peptidase -
A7P61_RS03025 (A7P61_03025) 99705..99854 - 150 WP_231115726.1 DUF333 domain-containing protein -
A7P61_RS03030 (A7P61_03030) 100561..103416 + 2856 WP_064703064.1 autotransporter outer membrane beta-barrel domain-containing protein -
A7P61_RS03035 (A7P61_03035) 103458..103778 + 321 WP_064703065.1 NirD/YgiW/YdeI family stress tolerance protein -
A7P61_RS03040 (A7P61_03040) 103952..104230 - 279 WP_155740492.1 hypothetical protein -
A7P61_RS03045 (A7P61_03045) 104344..105051 - 708 WP_231115724.1 LuxR family transcriptional regulator -
A7P61_RS03050 (A7P61_03050) 105017..105607 - 591 WP_031594259.1 helix-turn-helix domain-containing protein -
A7P61_RS03055 (A7P61_03055) 106645..106962 + 318 WP_064703067.1 hypothetical protein -
A7P61_RS03060 (A7P61_03060) 106972..107193 + 222 WP_064703068.1 hypothetical protein -
A7P61_RS03065 (A7P61_03065) 107299..107829 + 531 WP_064703069.1 Major fimbrial subunit SMF-1 VF
A7P61_RS03070 (A7P61_03070) 107890..108627 + 738 WP_064703070.1 putative fimbrial chaperone YadV VF
A7P61_RS03075 (A7P61_03075) 108653..111238 + 2586 WP_074399944.1 Outer membrane usher protein HtrE VF
A7P61_RS03080 (A7P61_03080) 111251..112312 + 1062 WP_064703072.1 hypothetical protein VF
A7P61_RS03085 (A7P61_03085) 112369..113034 + 666 WP_081273772.1 response regulator transcription factor -
A7P61_RS03090 (A7P61_03090) 113071..114393 + 1323 WP_064703073.1 TolC family outer membrane protein -
A7P61_RS03095 (A7P61_03095) 114419..115678 + 1260 WP_064703074.1 HlyD family efflux transporter periplasmic adaptor subunit -
A7P61_RS03100 (A7P61_03100) 115696..117879 + 2184 WP_064703075.1 peptidase domain-containing ABC transporter -
A7P61_RS03105 (A7P61_03105) 117872..118303 + 432 WP_064703076.1 DcrB-related protein -
A7P61_RS03110 (A7P61_03110) 118392..118889 - 498 WP_064703077.1 FidL-like protein -
A7P61_RS03115 (A7P61_03115) 118886..119716 - 831 WP_031594261.1 winged helix-turn-helix domain-containing protein -
A7P61_RS03120 (A7P61_03120) 120124..120738 + 615 WP_031594262.1 hypothetical protein VF
A7P61_RS03125 (A7P61_03125) 120976..122259 + 1284 WP_064703078.1 beta-ketoacyl-ACP synthase II -
A7P61_RS03130 (A7P61_03130) 122487..123371 + 885 WP_064703079.1 ROK family protein -
A7P61_RS03135 (A7P61_03135) 123384..124337 - 954 WP_064703080.1 LacI family DNA-binding transcriptional regulator -
A7P61_RS03140 (A7P61_03140) 124626..124955 + 330 WP_031594544.1 PTS sugar transporter subunit IIB -
A7P61_RS03145 (A7P61_03145) 124952..126280 + 1329 WP_064703081.1 PTS sugar transporter subunit IIC -
A7P61_RS03150 (A7P61_03150) 126301..127701 + 1401 WP_031594546.1 glycoside hydrolase family 1 protein -
A7P61_RS03155 (A7P61_03155) 127698..128012 + 315 WP_039387287.1 PTS lactose/cellobiose transporter subunit IIA -
A7P61_RS03160 (A7P61_03160) 128219..129007 - 789 WP_031594549.1 MipA/OmpV family protein -
A7P61_RS03165 (A7P61_03165) 129137..129835 + 699 WP_010256840.1 Response regulator ArlR VF
A7P61_RS03170 (A7P61_03170) 129832..131001 + 1170 WP_064703083.1 ATP-binding protein -
A7P61_RS03175 (A7P61_03175) 131095..132228 + 1134 WP_064703084.1 efflux RND transporter periplasmic adaptor subunit -
A7P61_RS03180 (A7P61_03180) 132225..135269 + 3045 WP_064703085.1 efflux RND transporter permease subunit -
A7P61_RS03185 (A7P61_03185) 135320..135565 - 246 WP_010256845.1 hypothetical protein -
A7P61_RS03190 (A7P61_03190) 135637..136542 - 906 WP_022624205.1 LysR family transcriptional regulator -
A7P61_RS03195 (A7P61_03195) 136647..137429 + 783 WP_033781025.1 acetolactate decarboxylase -
A7P61_RS03200 (A7P61_03200) 137444..139123 + 1680 WP_010256852.1 acetolactate synthase AlsS -
A7P61_RS03205 (A7P61_03205) 139145..139918 + 774 WP_064703086.1 Diacetyl reductase [(S)-acetoin forming] VF
A7P61_RS03210 (A7P61_03210) 140124..141575 + 1452 WP_074399945.1 Flagellin VF
A7P61_RS03215 (A7P61_03215) 141916..143229 + 1314 WP_031593743.1 CitMHS family transporter -
A7P61_RS03220 (A7P61_03220) 143397..144236 + 840 WP_064703089.1 MBL fold metallo-hydrolase -
A7P61_RS03225 (A7P61_03225) 144288..144602 - 315 WP_039387307.1 HigA family addiction module antitoxin -
A7P61_RS03230 (A7P61_03230) 144602..144883 - 282 WP_064703090.1 type II toxin-antitoxin system RelE/ParE family toxin -
A7P61_RS03235 (A7P61_03235) 145037..145288 + 252 WP_064703091.1 YoeB-YefM toxin-antitoxin system antitoxin YefM -
A7P61_RS03240 (A7P61_03240) 145459..147996 - 2538 WP_064703092.1 UvrABC system protein A VF
A7P61_RS03245 (A7P61_03245) 148969..149352 - 384 WP_064703094.1 hypothetical protein -
A7P61_RS03250 (A7P61_03250) 149352..149651 - 300 WP_064703095.1 type II toxin-antitoxin system HigB family toxin -
A7P61_RS03255 (A7P61_03255) 149884..151362 - 1479 WP_064703096.1 YsnF/AvaK domain-containing protein -
A7P61_RS03260 (A7P61_03260) 151649..152218 - 570 WP_064703097.1 Pyridoxine/pyridoxamine 5'-phosphate oxidase VF
A7P61_RS03265 (A7P61_03265) 152479..153063 + 585 WP_081273773.1 GNAT family protein -
A7P61_RS03270 (A7P61_03270) 153111..155249 - 2139 WP_064703098.1 EAL domain-containing protein -
A7P61_RS03275 (A7P61_03275) 155655..155894 - 240 WP_031593758.1 hypothetical protein -
A7P61_RS03280 (A7P61_03280) 156256..157689 - 1434 WP_064703101.1 hypothetical protein VF
A7P61_RS03285 (A7P61_03285) 158036..159817 + 1782 WP_064703102.1 GGDEF and EAL domain-containing protein -
A7P61_RS03290 (A7P61_03290) 159837..161420 - 1584 WP_064703103.1 sensor domain-containing diguanylate cyclase -
A7P61_RS03295 (A7P61_03295) 161824..161997 - 174 WP_231115725.1 hypothetical protein -
A7P61_RS03300 (A7P61_03300) 162516..163427 + 912 WP_031593112.1 hypothetical protein -
A7P61_RS03305 (A7P61_03305) 163429..163674 - 246 WP_031593111.1 hypothetical protein -
A7P61_RS03310 (A7P61_03310) 163892..164425 + 534 WP_064703105.1 SRPBCC family protein -
A7P61_RS03315 (A7P61_03315) 164426..165592 + 1167 WP_064703106.1 zinc-dependent alcohol dehydrogenase -
A7P61_RS03320 (A7P61_03320) 165930..166475 + 546 WP_031593108.1 chorismate mutase -
A7P61_RS03325 (A7P61_03325) 166498..167688 + 1191 WP_064703107.1 cytochrome P450 -
A7P61_RS03330 (A7P61_03330) 167723..168727 - 1005 WP_064703108.1 LacI family DNA-binding transcriptional regulator -
A7P61_RS03335 (A7P61_03335) 168757..170166 - 1410 WP_064703109.1 sucrose-6-phosphate hydrolase -
A7P61_RS03340 (A7P61_03340) 170166..171536 - 1371 WP_064703110.1 sucrose-specific PTS transporter subunit IIBC -
A7P61_RS03345 (A7P61_03345) 171604..173139 - 1536 WP_064703111.1 carbohydrate porin -
A7P61_RS03350 (A7P61_03350) 173297..174223 - 927 WP_064703112.1 aminoimidazole riboside kinase -
A7P61_RS03355 (A7P61_03355) 174443..175414 - 972 WP_064703113.1 ParB family protein -
A7P61_RS03360 (A7P61_03360) 175411..176613 - 1203 WP_064703114.1 Plasmid partition protein A VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance