MGE detailed information
MGE type: Mobilizable plasmid MGE length: 178621 bp
Accession: NZ_CP122326 Location: 1..178621 Organism: Pantoea agglomerans pv. betae strain 4188 Replicon: plasmid pPAB03
Accession: NZ_CP122326 Location: 1..178621 Organism: Pantoea agglomerans pv. betae strain 4188 Replicon: plasmid pPAB03
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
A7P61_RS02585 (A7P61_02585) | 1..1074 | + | 1074 | WP_031593098.1 | RepB family plasmid replication initiator protein | - |
A7P61_RS02590 (A7P61_02590) | 2397..3584 | - | 1188 | WP_064703115.1 | diguanylate phosphodiesterase | - |
A7P61_RS02595 (A7P61_02595) | 3836..4045 | - | 210 | WP_031593096.1 | DUF1471 domain-containing protein | - |
A7P61_RS02600 (A7P61_02600) | 4247..6031 | - | 1785 | WP_064703116.1 | GGDEF and EAL domain-containing protein | - |
A7P61_RS02605 (A7P61_02605) | 6551..6775 | - | 225 | WP_010256955.1 | DUF3606 domain-containing protein | - |
A7P61_RS02610 (A7P61_02610) | 7145..7384 | + | 240 | WP_022624236.1 | hypothetical protein | - |
A7P61_RS02615 (A7P61_02615) | 7560..8048 | + | 489 | WP_064703117.1 | Hsp20 family protein | - |
A7P61_RS02620 (A7P61_02620) | 8121..8885 | - | 765 | WP_064703118.1 | MerR family transcriptional regulator | - |
A7P61_RS02625 (A7P61_02625) | 9081..9290 | - | 210 | WP_010256969.1 | CsbD family protein | - |
A7P61_RS02630 (A7P61_02630) | 9450..10679 | - | 1230 | WP_064703119.1 | diguanylate phosphodiesterase | - |
A7P61_RS02635 (A7P61_02635) | 11635..11868 | + | 234 | WP_060678836.1 | hypothetical protein | - |
A7P61_RS02640 (A7P61_02640) | 11944..12273 | - | 330 | WP_031593089.1 | hypothetical protein | - |
A7P61_RS02645 (A7P61_02645) | 12912..14570 | + | 1659 | WP_064703120.1 | hypothetical protein | VF |
A7P61_RS02650 (A7P61_02650) | 15171..17096 | + | 1926 | WP_064703121.1 | hypothetical protein | VF |
A7P61_RS02655 (A7P61_02655) | 17152..17964 | - | 813 | WP_064703122.1 | hypothetical protein | - |
A7P61_RS02660 (A7P61_02660) | 18042..19157 | - | 1116 | WP_064703123.1 | metallophosphoesterase | - |
A7P61_RS02665 (A7P61_02665) | 19395..21722 | - | 2328 | WP_064703124.1 | FdhF/YdeP family oxidoreductase | - |
A7P61_RS02670 (A7P61_02670) | 22077..22520 | + | 444 | WP_064703141.1 | cyclophilin-like fold protein | - |
A7P61_RS02675 (A7P61_02675) | 22694..23041 | - | 348 | WP_003850685.1 | HNH nuclease YajD | - |
A7P61_RS02680 (A7P61_02680) | 23376..23543 | - | 168 | WP_009093121.1 | hypothetical protein | - |
A7P61_RS02685 (A7P61_02685) | 23834..26938 | + | 3105 | WP_064703125.1 | Multidrug efflux pump subunit AcrB | VF |
A7P61_RS02690 (A7P61_02690) | 26998..28023 | - | 1026 | WP_031593079.1 | alpha/beta hydrolase | - |
A7P61_RS02695 (A7P61_02695) | 28092..29216 | - | 1125 | WP_081273776.1 | MFS transporter | - |
A7P61_RS02700 (A7P61_02700) | 29419..30315 | + | 897 | WP_064703127.1 | LysR family transcriptional regulator | - |
A7P61_RS02705 (A7P61_02705) | 30379..30555 | - | 177 | WP_074399946.1 | general stress protein | - |
A7P61_RS02710 (A7P61_02710) | 30757..31053 | + | 297 | WP_064703128.1 | hypothetical protein | - |
A7P61_RS02715 (A7P61_02715) | 31098..31385 | - | 288 | WP_031593074.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
A7P61_RS02720 (A7P61_02720) | 31385..31624 | - | 240 | WP_064703129.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
A7P61_RS02725 (A7P61_02725) | 31965..33938 | + | 1974 | WP_064703130.1 | hypothetical protein | VF |
A7P61_RS02730 (A7P61_02730) | 34043..35059 | + | 1017 | WP_039387390.1 | NAD(P)-dependent alcohol dehydrogenase | - |
A7P61_RS02735 (A7P61_02735) | 35109..35777 | - | 669 | WP_064703131.1 | DUF2268 domain-containing putative Zn-dependent protease | - |
A7P61_RS02740 (A7P61_02740) | 36128..36907 | + | 780 | WP_039387394.1 | MBL fold metallo-hydrolase | - |
A7P61_RS02745 (A7P61_02745) | 36982..37974 | + | 993 | WP_064703132.1 | HTH-type transcriptional regulator CdhR | VF |
A7P61_RS02750 (A7P61_02750) | 38066..38467 | - | 402 | WP_064703133.1 | H-NS family nucleoid-associated regulatory protein | - |
A7P61_RS02755 (A7P61_02755) | 38743..40305 | + | 1563 | WP_064703134.1 | hypothetical protein | VF |
A7P61_RS02760 (A7P61_02760) | 40374..40820 | + | 447 | WP_031593775.1 | VOC family protein | - |
A7P61_RS02765 (A7P61_02765) | 41048..41449 | - | 402 | WP_010257055.1 | H-NS family nucleoid-associated regulatory protein | - |
A7P61_RS02770 (A7P61_02770) | 42629..42808 | + | 180 | WP_071941192.1 | DUF2256 domain-containing protein | - |
A7P61_RS02775 (A7P61_02775) | 42861..43163 | - | 303 | WP_031593776.1 | hypothetical protein | - |
A7P61_RS02780 (A7P61_02780) | 43276..43818 | - | 543 | WP_064703135.1 | YfaZ family outer membrane protein | - |
A7P61_RS02785 (A7P61_02785) | 43882..44118 | - | 237 | WP_031593778.1 | YgdI/YgdR family lipoprotein | - |
A7P61_RS02790 (A7P61_02790) | 44492..44911 | + | 420 | WP_074399947.1 | DUF1090 family protein | - |
A7P61_RS02795 (A7P61_02795) | 45588..45968 | + | 381 | WP_064703136.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
A7P61_RS02800 (A7P61_02800) | 46402..46872 | - | 471 | WP_064703137.1 | WbuC family cupin fold metalloprotein | - |
A7P61_RS02805 (A7P61_02805) | 47211..47435 | + | 225 | WP_031593784.1 | FeoA domain-containing protein | - |
A7P61_RS02810 (A7P61_02810) | 47435..49762 | + | 2328 | WP_064703138.1 | Fe(2+) transporter FeoB | VF |
A7P61_RS02815 (A7P61_02815) | 49888..50772 | - | 885 | Protein_46 | alpha/beta hydrolase | - |
A7P61_RS02820 (A7P61_02820) | 51195..51836 | - | 642 | WP_283833877.1 | hypothetical protein | - |
A7P61_RS02825 (A7P61_02825) | 52176..52354 | + | 179 | Protein_48 | DUF6500 family protein | - |
A7P61_RS02830 (A7P61_02830) | 52360..53007 | - | 648 | WP_064704006.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
A7P61_RS02835 (A7P61_02835) | 53176..56162 | + | 2987 | Protein_50 | Tn3 family transposase TnpA_TnEc1 | Transposase |
A7P61_RS02840 (A7P61_02840) | 56874..57392 | + | 519 | WP_064703440.1 | amidohydrolase family protein | - |
A7P61_RS02845 (A7P61_02845) | 57842..58879 | - | 1038 | WP_064703442.1 | tyrosine-type recombinase/integrase | - |
A7P61_RS02850 (A7P61_02850) | 59827..60297 | + | 471 | WP_064703443.1 | SgcJ/EcaC family oxidoreductase | - |
A7P61_RS02855 (A7P61_02855) | 60597..61814 | - | 1218 | WP_064703444.1 | monooxygenase | - |
A7P61_RS02860 (A7P61_02860) | 61807..63267 | - | 1461 | WP_064703445.1 | MFS transporter | - |
A7P61_RS02865 (A7P61_02865) | 63379..63558 | - | 180 | WP_155740504.1 | hypothetical protein | - |
A7P61_RS02870 (A7P61_02870) | 63627..65036 | - | 1410 | WP_064703446.1 | LLM class flavin-dependent oxidoreductase | - |
A7P61_RS02875 (A7P61_02875) | 65105..66517 | - | 1413 | WP_064703447.1 | FAD-dependent oxidoreductase | - |
A7P61_RS02880 (A7P61_02880) | 66537..67709 | - | 1173 | WP_064703448.1 | FMNH2-dependent alkanesulfonate monooxygenase | - |
A7P61_RS02885 (A7P61_02885) | 67984..69873 | + | 1890 | WP_064703449.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
A7P61_RS02890 (A7P61_02890) | 69969..70919 | + | 951 | WP_064703450.1 | sulfonate ABC transporter substrate-binding protein | - |
A7P61_RS02895 (A7P61_02895) | 71233..71502 | - | 270 | WP_064703451.1 | DUF1471 family periplasmic protein YahO | - |
A7P61_RS02900 (A7P61_02900) | 71775..72911 | - | 1137 | WP_064703452.1 | HlyD family secretion protein | - |
A7P61_RS02905 (A7P61_02905) | 72913..73239 | - | 327 | WP_064703453.1 | DUF3302 domain-containing protein | - |
A7P61_RS02910 (A7P61_02910) | 73833..75485 | + | 1653 | WP_064703454.1 | intermembrane transport protein PqiB | - |
A7P61_RS02915 (A7P61_02915) | 75626..75877 | + | 252 | WP_064703455.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
A7P61_RS02920 (A7P61_02920) | 75874..76161 | + | 288 | WP_010257115.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
A7P61_RS02925 (A7P61_02925) | 76524..76838 | + | 315 | WP_031593845.1 | hypothetical protein | - |
A7P61_RS02930 (A7P61_02930) | 76835..77653 | - | 819 | WP_064703456.1 | DUF4225 domain-containing protein | - |
A7P61_RS02935 (A7P61_02935) | 77989..78684 | + | 696 | WP_064703457.1 | haloacid dehalogenase type II | - |
A7P61_RS02940 (A7P61_02940) | 78722..80251 | - | 1530 | WP_064703458.1 | Fic family protein | - |
A7P61_RS02945 (A7P61_02945) | 80398..80763 | - | 366 | WP_064703459.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF | - |
A7P61_RS02950 (A7P61_02950) | 80760..81080 | - | 321 | WP_022624286.1 | 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE | - |
A7P61_RS02955 (A7P61_02955) | 81080..82747 | - | 1668 | WP_064703460.1 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase | - |
A7P61_RS02960 (A7P61_02960) | 82747..83649 | - | 903 | WP_064703461.1 | 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase | - |
A7P61_RS02965 (A7P61_02965) | 83649..85628 | - | 1980 | WP_064703462.1 | Bifunctional polymyxin resistance protein ArnA | VF |
A7P61_RS02970 (A7P61_02970) | 85625..86608 | - | 984 | WP_064703463.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
A7P61_RS02975 (A7P61_02975) | 86610..87746 | - | 1137 | WP_064703464.1 | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | VF |
A7P61_RS02980 (A7P61_02980) | 88443..89021 | + | 579 | WP_064703471.1 | YceI family protein | - |
A7P61_RS02985 (A7P61_02985) | 89048..89833 | - | 786 | WP_064703465.1 | hypothetical protein | - |
A7P61_RS02990 (A7P61_02990) | 89830..90330 | - | 501 | WP_081273789.1 | sigma-70 family RNA polymerase sigma factor | - |
A7P61_RS02995 (A7P61_02995) | 90367..90903 | - | 537 | WP_064703467.1 | tetratricopeptide repeat protein | - |
A7P61_RS03000 (A7P61_03000) | 91047..92060 | - | 1014 | WP_064703468.1 | Gfo/Idh/MocA family oxidoreductase | - |
A7P61_RS03005 (A7P61_03005) | 92169..93179 | + | 1011 | WP_031593860.1 | LacI family DNA-binding transcriptional regulator | - |
A7P61_RS03010 (A7P61_03010) | 93813..94265 | + | 453 | WP_064703470.1 | PACE efflux transporter | - |
A7P61_RS03015 (A7P61_03015) | 94496..94699 | + | 204 | WP_031593862.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
A7P61_RS03020 (A7P61_03020) | 94880..99076 | - | 4197 | WP_283833876.1 | S6 family peptidase | - |
A7P61_RS03025 (A7P61_03025) | 99705..99854 | - | 150 | WP_231115726.1 | DUF333 domain-containing protein | - |
A7P61_RS03030 (A7P61_03030) | 100561..103416 | + | 2856 | WP_064703064.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
A7P61_RS03035 (A7P61_03035) | 103458..103778 | + | 321 | WP_064703065.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
A7P61_RS03040 (A7P61_03040) | 103952..104230 | - | 279 | WP_155740492.1 | hypothetical protein | - |
A7P61_RS03045 (A7P61_03045) | 104344..105051 | - | 708 | WP_231115724.1 | LuxR family transcriptional regulator | - |
A7P61_RS03050 (A7P61_03050) | 105017..105607 | - | 591 | WP_031594259.1 | helix-turn-helix domain-containing protein | - |
A7P61_RS03055 (A7P61_03055) | 106645..106962 | + | 318 | WP_064703067.1 | hypothetical protein | - |
A7P61_RS03060 (A7P61_03060) | 106972..107193 | + | 222 | WP_064703068.1 | hypothetical protein | - |
A7P61_RS03065 (A7P61_03065) | 107299..107829 | + | 531 | WP_064703069.1 | Major fimbrial subunit SMF-1 | VF |
A7P61_RS03070 (A7P61_03070) | 107890..108627 | + | 738 | WP_064703070.1 | putative fimbrial chaperone YadV | VF |
A7P61_RS03075 (A7P61_03075) | 108653..111238 | + | 2586 | WP_074399944.1 | Outer membrane usher protein HtrE | VF |
A7P61_RS03080 (A7P61_03080) | 111251..112312 | + | 1062 | WP_064703072.1 | hypothetical protein | VF |
A7P61_RS03085 (A7P61_03085) | 112369..113034 | + | 666 | WP_081273772.1 | response regulator transcription factor | - |
A7P61_RS03090 (A7P61_03090) | 113071..114393 | + | 1323 | WP_064703073.1 | TolC family outer membrane protein | - |
A7P61_RS03095 (A7P61_03095) | 114419..115678 | + | 1260 | WP_064703074.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
A7P61_RS03100 (A7P61_03100) | 115696..117879 | + | 2184 | WP_064703075.1 | peptidase domain-containing ABC transporter | - |
A7P61_RS03105 (A7P61_03105) | 117872..118303 | + | 432 | WP_064703076.1 | DcrB-related protein | - |
A7P61_RS03110 (A7P61_03110) | 118392..118889 | - | 498 | WP_064703077.1 | FidL-like protein | - |
A7P61_RS03115 (A7P61_03115) | 118886..119716 | - | 831 | WP_031594261.1 | winged helix-turn-helix domain-containing protein | - |
A7P61_RS03120 (A7P61_03120) | 120124..120738 | + | 615 | WP_031594262.1 | hypothetical protein | VF |
A7P61_RS03125 (A7P61_03125) | 120976..122259 | + | 1284 | WP_064703078.1 | beta-ketoacyl-ACP synthase II | - |
A7P61_RS03130 (A7P61_03130) | 122487..123371 | + | 885 | WP_064703079.1 | ROK family protein | - |
A7P61_RS03135 (A7P61_03135) | 123384..124337 | - | 954 | WP_064703080.1 | LacI family DNA-binding transcriptional regulator | - |
A7P61_RS03140 (A7P61_03140) | 124626..124955 | + | 330 | WP_031594544.1 | PTS sugar transporter subunit IIB | - |
A7P61_RS03145 (A7P61_03145) | 124952..126280 | + | 1329 | WP_064703081.1 | PTS sugar transporter subunit IIC | - |
A7P61_RS03150 (A7P61_03150) | 126301..127701 | + | 1401 | WP_031594546.1 | glycoside hydrolase family 1 protein | - |
A7P61_RS03155 (A7P61_03155) | 127698..128012 | + | 315 | WP_039387287.1 | PTS lactose/cellobiose transporter subunit IIA | - |
A7P61_RS03160 (A7P61_03160) | 128219..129007 | - | 789 | WP_031594549.1 | MipA/OmpV family protein | - |
A7P61_RS03165 (A7P61_03165) | 129137..129835 | + | 699 | WP_010256840.1 | Response regulator ArlR | VF |
A7P61_RS03170 (A7P61_03170) | 129832..131001 | + | 1170 | WP_064703083.1 | ATP-binding protein | - |
A7P61_RS03175 (A7P61_03175) | 131095..132228 | + | 1134 | WP_064703084.1 | efflux RND transporter periplasmic adaptor subunit | - |
A7P61_RS03180 (A7P61_03180) | 132225..135269 | + | 3045 | WP_064703085.1 | efflux RND transporter permease subunit | - |
A7P61_RS03185 (A7P61_03185) | 135320..135565 | - | 246 | WP_010256845.1 | hypothetical protein | - |
A7P61_RS03190 (A7P61_03190) | 135637..136542 | - | 906 | WP_022624205.1 | LysR family transcriptional regulator | - |
A7P61_RS03195 (A7P61_03195) | 136647..137429 | + | 783 | WP_033781025.1 | acetolactate decarboxylase | - |
A7P61_RS03200 (A7P61_03200) | 137444..139123 | + | 1680 | WP_010256852.1 | acetolactate synthase AlsS | - |
A7P61_RS03205 (A7P61_03205) | 139145..139918 | + | 774 | WP_064703086.1 | Diacetyl reductase [(S)-acetoin forming] | VF |
A7P61_RS03210 (A7P61_03210) | 140124..141575 | + | 1452 | WP_074399945.1 | Flagellin | VF |
A7P61_RS03215 (A7P61_03215) | 141916..143229 | + | 1314 | WP_031593743.1 | CitMHS family transporter | - |
A7P61_RS03220 (A7P61_03220) | 143397..144236 | + | 840 | WP_064703089.1 | MBL fold metallo-hydrolase | - |
A7P61_RS03225 (A7P61_03225) | 144288..144602 | - | 315 | WP_039387307.1 | HigA family addiction module antitoxin | - |
A7P61_RS03230 (A7P61_03230) | 144602..144883 | - | 282 | WP_064703090.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
A7P61_RS03235 (A7P61_03235) | 145037..145288 | + | 252 | WP_064703091.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | - |
A7P61_RS03240 (A7P61_03240) | 145459..147996 | - | 2538 | WP_064703092.1 | UvrABC system protein A | VF |
A7P61_RS03245 (A7P61_03245) | 148969..149352 | - | 384 | WP_064703094.1 | hypothetical protein | - |
A7P61_RS03250 (A7P61_03250) | 149352..149651 | - | 300 | WP_064703095.1 | type II toxin-antitoxin system HigB family toxin | - |
A7P61_RS03255 (A7P61_03255) | 149884..151362 | - | 1479 | WP_064703096.1 | YsnF/AvaK domain-containing protein | - |
A7P61_RS03260 (A7P61_03260) | 151649..152218 | - | 570 | WP_064703097.1 | Pyridoxine/pyridoxamine 5'-phosphate oxidase | VF |
A7P61_RS03265 (A7P61_03265) | 152479..153063 | + | 585 | WP_081273773.1 | GNAT family protein | - |
A7P61_RS03270 (A7P61_03270) | 153111..155249 | - | 2139 | WP_064703098.1 | EAL domain-containing protein | - |
A7P61_RS03275 (A7P61_03275) | 155655..155894 | - | 240 | WP_031593758.1 | hypothetical protein | - |
A7P61_RS03280 (A7P61_03280) | 156256..157689 | - | 1434 | WP_064703101.1 | hypothetical protein | VF |
A7P61_RS03285 (A7P61_03285) | 158036..159817 | + | 1782 | WP_064703102.1 | GGDEF and EAL domain-containing protein | - |
A7P61_RS03290 (A7P61_03290) | 159837..161420 | - | 1584 | WP_064703103.1 | sensor domain-containing diguanylate cyclase | - |
A7P61_RS03295 (A7P61_03295) | 161824..161997 | - | 174 | WP_231115725.1 | hypothetical protein | - |
A7P61_RS03300 (A7P61_03300) | 162516..163427 | + | 912 | WP_031593112.1 | hypothetical protein | - |
A7P61_RS03305 (A7P61_03305) | 163429..163674 | - | 246 | WP_031593111.1 | hypothetical protein | - |
A7P61_RS03310 (A7P61_03310) | 163892..164425 | + | 534 | WP_064703105.1 | SRPBCC family protein | - |
A7P61_RS03315 (A7P61_03315) | 164426..165592 | + | 1167 | WP_064703106.1 | zinc-dependent alcohol dehydrogenase | - |
A7P61_RS03320 (A7P61_03320) | 165930..166475 | + | 546 | WP_031593108.1 | chorismate mutase | - |
A7P61_RS03325 (A7P61_03325) | 166498..167688 | + | 1191 | WP_064703107.1 | cytochrome P450 | - |
A7P61_RS03330 (A7P61_03330) | 167723..168727 | - | 1005 | WP_064703108.1 | LacI family DNA-binding transcriptional regulator | - |
A7P61_RS03335 (A7P61_03335) | 168757..170166 | - | 1410 | WP_064703109.1 | sucrose-6-phosphate hydrolase | - |
A7P61_RS03340 (A7P61_03340) | 170166..171536 | - | 1371 | WP_064703110.1 | sucrose-specific PTS transporter subunit IIBC | - |
A7P61_RS03345 (A7P61_03345) | 171604..173139 | - | 1536 | WP_064703111.1 | carbohydrate porin | - |
A7P61_RS03350 (A7P61_03350) | 173297..174223 | - | 927 | WP_064703112.1 | aminoimidazole riboside kinase | - |
A7P61_RS03355 (A7P61_03355) | 174443..175414 | - | 972 | WP_064703113.1 | ParB family protein | - |
A7P61_RS03360 (A7P61_03360) | 175411..176613 | - | 1203 | WP_064703114.1 | Plasmid partition protein A | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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