MGE detailed information
MGE type: Prophage MGE length: 21707 bp
Accession: NZ_CP122317 Location: 162513..184219 Organism: Escherichia coli strain HT-948 Replicon: chromosome
Accession: NZ_CP122317 Location: 162513..184219 Organism: Escherichia coli strain HT-948 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QCG49_RS00705 (159028) | 159028..159774 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| QCG49_RS00710 (159863) | 159863..160549 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QCG49_RS00715 (160726) | 160726..160929 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QCG49_RS00720 (160964) | 160964..162424 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| QCG49_RS00725 (162513) | 162513..163880 | - | 1368 | Protein_144 | MHS family MFS transporter | - |
| QCG49_RS00730 (164401) | 164401..164514 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QCG49_RS00735 (164583) | 164583..164816 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QCG49_RS00740 (165133) | 165133..165723 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QCG49_RS00745 (165821) | 165821..166396 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QCG49_RS00750 (166396) | 166396..167358 | - | 963 | WP_001027733.1 | phage tail protein | - |
| QCG49_RS00755 (167309) | 167309..167878 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| QCG49_RS00760 (168267) | 168267..168500 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QCG49_RS00765 (168558) | 168558..168968 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QCG49_RS00770 (169120) | 169120..169293 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QCG49_RS00775 (169465) | 169465..169620 | - | 156 | WP_001309517.1 | protein YnfN | - |
| QCG49_RS00780 (169699) | 169699..169764 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| QCG49_RS00785 (169767) | 169767..169955 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| QCG49_RS00790 (169966) | 169966..170178 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QCG49_RS00795 (170541) | 170541..171038 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QCG49_RS00800 (171035) | 171035..171568 | - | 534 | WP_001092971.1 | lysozyme | - |
| QCG49_RS00805 (171565) | 171565..171876 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| QCG49_RS00810 (171881) | 171881..172096 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QCG49_RS00815 (172316) | 172316..172486 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QCG49_RS00820 (172850) | 172850..173065 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QCG49_RS00825 (173366) | 173366..173578 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QCG49_RS00830 (173633) | 173633..173722 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| QCG49_RS00835 (174000) | 174000..174752 | - | 753 | WP_001047135.1 | antitermination protein | - |
| QCG49_RS00840 (174766) | 174766..175815 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| QCG49_RS00845 (175817) | 175817..176095 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| QCG49_RS00850 (176162) | 176162..176413 | - | 252 | WP_000980994.1 | protein Rem | - |
| QCG49_RS00855 (176630) | 176630..176785 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QCG49_RS00860 (176857) | 176857..177144 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QCG49_RS00865 (177144) | 177144..177383 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QCG49_RS00870 (177408) | 177408..177713 | + | 306 | WP_001326990.1 | protein YdfV | - |
| QCG49_RS00875 (177916) | 177916..178248 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QCG49_RS00880 (178685) | 178685..178834 | - | 150 | WP_011443592.1 | protein YdfW | - |
| QCG49_RS00885 (178869) | 178869..179147 | - | 279 | Protein_176 | protein YdfX | - |
| QCG49_RS00890 (179131) | 179131..179361 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QCG49_RS00895 (179445) | 179445..179852 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| QCG49_RS00900 (180019) | 180019..180174 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QCG49_RS00905 (180176) | 180176..180304 | + | 129 | WP_000344964.1 | protein YdfB | - |
| QCG49_RS00910 (180334) | 180334..180552 | + | 219 | WP_001171942.1 | protein YdfC | - |
| QCG49_RS00915 (181120) | 181120..181308 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QCG49_RS00920 (181305) | 181305..181496 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| QCG49_RS00925 (181589) | 181589..182356 | + | 768 | Protein_184 | exonuclease | - |
| QCG49_RS00930 (182353) | 182353..183048 | + | 696 | Protein_185 | IS3 family transposase IS2 | Transposase |
| QCG49_RS00935 (183062) | 183062..184219 | + | 1158 | Protein_186 | Putative defective protein IntQ ; Integrase | Integrase |
| QCG49_RS00940 (184407) | 184407..185426 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QCG49_RS00945 (185438) | 185438..186652 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QCG49_RS00950 (186858) | 186858..187184 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| QCG49_RS00955 (187319) | 187319..187660 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QCG49_RS00960 (187695) | 187695..188255 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QCG49_RS00965 (188258) | 188258..188968 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.002 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0.003 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.002 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0 |