MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP122301 Location: 834396..845751 Organism: Salmonella enterica strain 27A Replicon: chromosome
Accession: NZ_CP122301 Location: 834396..845751 Organism: Salmonella enterica strain 27A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8R57_RS03990 (829842) | 829842..830940 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| P8R57_RS03995 (830950) | 830950..832467 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| P8R57_RS04000 (832543) | 832543..833088 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| P8R57_RS04005 (833353) | 833353..834111 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| P8R57_RS04015 (834396) | 834396..835202 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| P8R57_RS04020 (835482) | 835482..835733 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| P8R57_RS04025 (835942) | 835942..836169 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| P8R57_RS04030 (836169) | 836169..836567 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| P8R57_RS04035 (837375) | 837375..837911 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| P8R57_RS04040 (837958) | 837958..838590 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| P8R57_RS04045 (839309) | 839309..839890 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| P8R57_RS04050 (840010) | 840010..842493 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| P8R57_RS04055 (842534) | 842534..843277 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| P8R57_RS04060 (843274) | 843274..844350 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| P8R57_RS04065 (844494) | 844494..845006 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| P8R57_RS04070 (844993) | 844993..845751 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| P8R57_RS04075 (845961) | 845961..846809 | - | 849 | WP_000503687.1 | nickel/cobalt efflux protein RcnA | - |
| P8R57_RS04080 (846931) | 846931..847203 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| P8R57_RS04085 (847234) | 847234..848463 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| P8R57_RS04090 (848605) | 848605..849060 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| P8R57_RS04095 (849164) | 849164..850027 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |