NZ_CP1216561..186301

MGE detailed information

MGE type: Non-Mobilizable plasmid        MGE length: 186301 bp
Accession: NZ_CP121656        Location: 1..186301         Organism: Rhizobium sp. CB3171       Replicon: plasmid pCB3171_4


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QA648_RS35465 (QA648_35465) 1..1215 + 1215 WP_283055006.1 hypothetical protein VF
QA648_RS35470 (QA648_35470) 1212..2207 + 996 WP_283055007.1 plasmid partitioning protein RepB -
QA648_RS35475 (QA648_35475) 2402..3616 + 1215 WP_283055008.1 plasmid replication protein RepC -
QA648_RS35480 (QA648_35480) 3666..4073 + 408 Protein_3 hypothetical protein -
QA648_RS35485 (QA648_35485) 4117..4320 - 204 WP_040678917.1 cold-shock protein -
QA648_RS35490 (QA648_35490) 4577..4972 + 396 WP_283055009.1 RidA family protein -
QA648_RS35495 (QA648_35495) 5096..6193 + 1098 WP_283055071.1 IS1595 family transposase ISRm32 Transposase
QA648_RS35500 (QA648_35500) 6458..7279 - 822 WP_283055010.1 hypothetical protein -
QA648_RS35505 (QA648_35505) 7808..8266 + 459 WP_283055011.1 GNAT family N-acetyltransferase -
QA648_RS35510 (QA648_35510) 8558..8794 + 237 WP_283055012.1 hypothetical protein -
QA648_RS35515 (QA648_35515) 8953..10005 - 1053 WP_283055013.1 site-specific integrase -
QA648_RS35520 (QA648_35520) 10005..10391 - 387 WP_283055014.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
QA648_RS35525 (QA648_35525) 10391..10648 - 258 WP_283055015.1 type II toxin-antitoxin system VapB family antitoxin Antitoxin Detail
QA648_RS35530 (QA648_35530) 10909..12480 + 1572 WP_283055072.1 IS481 family transposase ISChy6 Transposase
QA648_RS35535 (QA648_35535) 12471..13409 + 939 WP_283055016.1 TniB family NTP-binding protein -
QA648_RS35540 (QA648_35540) 13406..14548 + 1143 WP_283055017.1 TniQ family protein -
QA648_RS35545 (QA648_35545) 15017..15976 + 960 WP_283055018.1 DUF1403 family protein -
QA648_RS35550 (QA648_35550) 15979..16683 + 705 WP_283055019.1 SMC-Scp complex subunit ScpB -
QA648_RS35555 (QA648_35555) 16785..18791 + 2007 WP_283055020.1 ATP-binding protein -
QA648_RS35560 (QA648_35560) 18944..20218 - 1275 WP_283055021.1 hypothetical protein -
QA648_RS35565 (QA648_35565) 20301..21722 - 1422 WP_283055022.1 UvrD-helicase domain-containing protein -
QA648_RS35570 (QA648_35570) 21724..22830 - 1107 WP_283055023.1 AAA family ATPase -
QA648_RS35575 (QA648_35575) 23034..24560 + 1527 WP_283051926.1 IS21 family transposase ISRsp3 Transposase
QA648_RS35580 (QA648_35580) 24550..25362 + 813 WP_283051923.1 IS21 family transposase IS1600 Transposase
QA648_RS35585 (QA648_35585) 25982..26899 - 918 WP_283055024.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
QA648_RS35590 (QA648_35590) 26896..27498 - 603 WP_283055025.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin Detail
QA648_RS35595 (QA648_35595) 27599..31669 + 4071 WP_283055026.1 helix-turn-helix transcriptional regulator -
QA648_RS35600 (QA648_35600) 32097..33749 - 1653 WP_283054807.1 IS66 family transposase ISRm14 Transposase
QA648_RS35605 (QA648_35605) 33812..34165 - 354 WP_283054400.1 IS66 family transposase ISRm14 Transposase
QA648_RS35610 (QA648_35610) 34162..34605 - 444 WP_283054806.1 transposase -
QA648_RS35615 (QA648_35615) 34796..36370 - 1575 WP_283055027.1 S53 family peptidase -
QA648_RS35620 (QA648_35620) 36367..37563 - 1197 WP_283055029.1 hypothetical protein -
QA648_RS35625 (QA648_35625) 37579..37914 - 336 WP_283055030.1 hypothetical protein -
QA648_RS35630 (QA648_35630) 37994..40096 - 2103 WP_283055031.1 multicopper oxidase family protein -
QA648_RS35635 (QA648_35635) 40846..41072 + 227 Protein_34 hypothetical protein -
QA648_RS35640 (QA648_35640) 41150..41443 - 294 WP_283055073.1 WGR domain-containing protein -
QA648_RS35645 (QA648_35645) 41620..41832 + 213 WP_283055032.1 hypothetical protein -
QA648_RS35650 (QA648_35650) 41772..43139 - 1368 WP_283055033.1 ISL3 family transposase ISMex24 Transposase
QA648_RS35655 (QA648_35655) 43372..45279 - 1908 WP_283055034.1 DUF262 domain-containing protein -
QA648_RS35660 (QA648_35660) 45964..46257 - 294 WP_283055074.1 WGR domain-containing protein -
QA648_RS35665 (QA648_35665) 46442..46663 + 222 WP_283055035.1 hypothetical protein -
QA648_RS35670 (QA648_35670) 46951..47193 - 243 WP_283055036.1 DUF2312 domain-containing protein -
QA648_RS35675 (QA648_35675) 47264..47605 - 342 WP_283055037.1 hypothetical protein -
QA648_RS35680 (QA648_35680) 47623..48297 - 675 WP_283055038.1 hypothetical protein VF
QA648_RS35685 (QA648_35685) 48783..49169 + 387 WP_283055039.1 hypothetical protein Relaxase
QA648_RS35690 (QA648_35690) 49162..52386 + 3225 WP_283055040.1 hypothetical protein Relaxase
QA648_RS35695 (QA648_35695) 52801..53118 - 318 WP_283055041.1 CopG family transcriptional regulator -
QA648_RS35700 (QA648_35700) 53115..53483 - 369 WP_283055042.1 hypothetical protein -
QA648_RS35705 (QA648_35705) 53547..53981 - 435 WP_283055043.1 hypothetical protein -
QA648_RS35710 (QA648_35710) 53981..54187 - 207 WP_283055044.1 hypothetical protein -
QA648_RS35715 (QA648_35715) 54312..55409 - 1098 WP_283055045.1 IS1595 family transposase ISRm32 Transposase
QA648_RS35720 (QA648_35720) 55412..55759 - 348 WP_283055046.1 hypothetical protein -
QA648_RS35725 (QA648_35725) 56221..56469 + 249 WP_283055047.1 hypothetical protein -
QA648_RS35730 (QA648_35730) 56529..56699 + 171 WP_283055048.1 hypothetical protein -
QA648_RS35735 (QA648_35735) 56706..57296 + 591 WP_283055049.1 zeta toxin family protein -
QA648_RS35740 (QA648_35740) 57522..57737 + 216 WP_283055050.1 hypothetical protein -
QA648_RS35745 (QA648_35745) 57741..65459 - 7719 WP_283055051.1 XopAD/skwp family type III secretion system effector -
QA648_RS35750 (QA648_35750) 65646..65810 - 165 Protein_57 IS5 family transposase ISRtr4 Transposase
QA648_RS35755 (QA648_35755) 65982..66175 + 194 Protein_58 IS66 family transposase -
QA648_RS35760 (QA648_35760) 66525..66860 + 336 WP_283055052.1 hypothetical protein -
QA648_RS35765 (QA648_35765) 67122..68138 + 1017 WP_283055075.1 IS110 family transposase ISMdi12 Transposase
QA648_RS35770 (QA648_35770) 68750..69196 + 447 WP_283055053.1 IS5 family transposase ISCARN107 Transposase
QA648_RS35775 (QA648_35775) 69307..70044 - 738 WP_104825865.1 IS21 family transposase ISRel16 Transposase
QA648_RS35780 (QA648_35780) 70057..71586 - 1530 WP_283047244.1 IS21 family transposase ISRel16 Transposase
QA648_RS35785 (QA648_35785) 71774..71983 + 210 WP_283055076.1 transposase -
QA648_RS35790 (QA648_35790) 72117..73499 - 1383 WP_283055054.1 shikimate kinase -
QA648_RS35795 (QA648_35795) 73454..73846 - 393 WP_283055055.1 hypothetical protein -
QA648_RS35800 (QA648_35800) 73800..74516 - 717 WP_283055056.1 hypothetical protein -
QA648_RS35805 (QA648_35805) 74482..74841 - 360 WP_283055057.1 hypothetical protein -
QA648_RS35810 (QA648_35810) 75040..77088 - 2049 WP_283055058.1 hypothetical protein -
QA648_RS35815 (QA648_35815) 77462..77803 - 342 WP_283054965.1 thioredoxin -
QA648_RS35820 (QA648_35820) 78032..78682 - 651 WP_283055059.1 IS110 family transposase ISCARN67 Transposase
QA648_RS35825 (QA648_35825) 78679..79299 - 621 WP_283055060.1 IS110 family transposase ISAtu7 Transposase
QA648_RS35830 (QA648_35830) 79558..80775 - 1218 WP_283055061.1 IS3 family transposase ISRm1 Transposase
QA648_RS35835 (QA648_35835) 80917..81708 + 792 WP_283055062.1 ATP-binding protein -
QA648_RS35840 (QA648_35840) 81950..82672 + 723 WP_283055063.1 Transcriptional regulatory protein OmpR VF
QA648_RS35845 (QA648_35845) 82740..83045 - 306 Protein_76 IS6 family transposase ISRle7 Transposase
QA648_RS35850 (QA648_35850) 83474..84514 - 1041 WP_283055064.1 IS110 family transposase ISMex9 Transposase
QA648_RS35855 (QA648_35855) 84990..86024 - 1035 WP_283054969.1 IS110 family transposase ISMno14 Transposase
QA648_RS35860 (QA648_35860) 86228..87245 + 1018 Protein_79 IS110 family transposase -
QA648_RS35865 (QA648_35865) 87621..88517 - 897 WP_283055065.1 IS21 family transposase ISRel5 Transposase
QA648_RS35870 (QA648_35870) 88514..89986 - 1473 WP_283055067.1 IS21 family transposase ISRel5 Transposase
QA648_RS35875 (QA648_35875) 90431..91484 - 1054 Protein_82 IS630 family transposase -
QA648_RS35880 (QA648_35880) 91851..92090 - 240 Protein_83 IS110 family transposase ISMdi10 Transposase
QA648_RS35885 (QA648_35885) 92093..92290 - 198 WP_283055068.1 IS110 family transposase ISMdi10 Transposase
QA648_RS35890 (QA648_35890) 92814..93800 + 987 WP_283055070.1 lytic transglycosylase domain-containing protein -
QA648_RS35895 (QA648_35895) 93810..94121 + 312 WP_283054941.1 hypothetical protein VF
QA648_RS35900 (QA648_35900) 94206..94484 + 279 WP_283054942.1 VirB3 family type IV secretion system protein -
QA648_RS35905 (QA648_35905) 94477..96837 + 2361 WP_283054943.1 DUF87 domain-containing protein -
QA648_RS35910 (QA648_35910) 96968..97771 + 804 WP_283054944.1 type IV secretion system protein -
QA648_RS35915 (QA648_35915) 97776..98912 + 1137 WP_283054945.1 type IV secretion system protein -
QA648_RS35920 (QA648_35920) 99124..99798 + 675 WP_283054947.1 Type IV secretion system protein PtlE VF
QA648_RS35925 (QA648_35925) 99937..100608 + 672 WP_283054948.1 Type IV secretion system protein virB9 VF
QA648_RS35930 (QA648_35930) 100802..101998 + 1197 WP_283054949.1 hypothetical protein VF
QA648_RS35935 (QA648_35935) 101995..102996 + 1002 WP_283054950.1 Type IV secretion system protein VirB11 VF
QA648_RS35940 (QA648_35940) 103303..103509 - 207 WP_283054951.1 hypothetical protein -
QA648_RS35945 (QA648_35945) 103479..104534 - 1056 WP_283055077.1 recombinase family protein -
QA648_RS35950 (QA648_35950) 104517..104909 - 393 Protein_97 IS607 family transposase ISNma20 Transposase
QA648_RS35955 (QA648_35955) 105053..105382 - 330 WP_283054952.1 ribbon-helix-helix protein, CopG family -
QA648_RS35960 (QA648_35960) 105484..106155 + 672 Protein_99 group II intron maturase-specific domain-containing protein -
QA648_RS35965 (QA648_35965) 106251..107954 - 1704 WP_283054953.1 Protein VirD4 VF
QA648_RS35970 (QA648_35970) 108119..108835 - 717 WP_283054954.1 hypothetical protein -
QA648_RS35975 (QA648_35975) 109158..109856 + 699 WP_283054955.1 zinc ribbon domain-containing protein -
QA648_RS35980 (QA648_35980) 109783..110232 - 450 Protein_103 IS110 family transposase ISRsp4 Transposase
QA648_RS35985 (QA648_35985) 110212..111065 - 854 Protein_104 IS110 family transposase ISMno14 Transposase
QA648_RS35990 (QA648_35990) 111348..112364 - 1017 WP_283055075.1 IS110 family transposase ISMdi12 Transposase
QA648_RS35995 (QA648_35995) 113419..114174 - 756 WP_283054956.1 IS21 family transposase ISRel16 Transposase
QA648_RS36000 (QA648_36000) 114187..115722 - 1536 WP_283054957.1 IS21 family transposase ISRel16 Transposase
QA648_RS36005 (QA648_36005) 116121..117158 - 1038 WP_120708988.1 IS110 family transposase ISMex9 Transposase
QA648_RS36010 (QA648_36010) 117348..117740 + 393 Protein_109 IS1595 family transposase ISRm32 Transposase
QA648_RS36015 (QA648_36015) 117839..118645 - 807 WP_283055078.1 reverse transcriptase domain-containing protein -
QA648_RS36020 (QA648_36020) 118627..119208 - 582 WP_283054958.1 IS4 family transposase ISHti4 Transposase
QA648_RS36025 (QA648_36025) 119501..119758 + 258 WP_283054959.1 hypothetical protein -
QA648_RS36030 (QA648_36030) 119995..120204 + 210 Protein_113 IS6 family transposase -
QA648_RS36035 (QA648_36035) 120928..126903 + 5976 Protein_114 XopAD/skwp family type III secretion system effector -
QA648_RS36040 (QA648_36040) 127057..127866 + 810 WP_283055079.1 shikimate kinase -
QA648_RS36045 (QA648_36045) 128255..129271 - 1017 WP_283055075.1 IS110 family transposase ISMdi12 Transposase
QA648_RS36050 (QA648_36050) 129489..129731 - 243 WP_283054960.1 IS66 family transposase IS292 Transposase
QA648_RS36055 (QA648_36055) 129841..130182 - 342 Protein_118 IS110 family transposase ISMtsp6 Transposase
QA648_RS36060 (QA648_36060) 130552..131793 + 1242 WP_283054961.1 hypothetical protein VF
QA648_RS36065 (QA648_36065) 131909..133099 + 1191 Protein_120 plasmid replication protein RepC -
QA648_RS36070 (QA648_36070) 133188..133406 - 219 Protein_121 IS6 family transposase -
QA648_RS36075 (QA648_36075) 133467..134168 - 702 WP_283054962.1 IS6 family transposase ISBj7 Transposase
QA648_RS36080 (QA648_36080) 134202..136328 - 2127 WP_283054963.1 Tn3 family transposase TnpA_ISAzs17 Transposase
QA648_RS36085 (QA648_36085) 136494..137075 + 582 WP_283055080.1 Tn3 family transposase ISPsy42 Transposase
QA648_RS36090 (QA648_36090) 137062..138332 - 1271 Protein_125 IS701 family transposase ISMmg4 Transposase
QA648_RS36095 (QA648_36095) 138426..143402 - 4977 WP_283054964.1 shikimate kinase -
QA648_RS36100 (QA648_36100) 143776..144117 - 342 WP_283054965.1 thioredoxin -
QA648_RS36105 (QA648_36105) 144346..145614 - 1269 WP_283054966.1 IS110 family transposase ISHvo9 Transposase
QA648_RS36110 (QA648_36110) 146049..147206 - 1158 Protein_129 IS110 family transposase ISRel9 Transposase
QA648_RS36115 (QA648_36115) 147553..147822 + 270 WP_283054967.1 hypothetical protein -
QA648_RS36120 (QA648_36120) 148469..149509 - 1041 WP_283054968.1 IS110 family transposase ISMlo2 Transposase
QA648_RS36125 (QA648_36125) 149711..150745 + 1035 WP_283054969.1 IS110 family transposase ISMno14 Transposase
QA648_RS36130 (QA648_36130) 151220..152257 + 1038 WP_120708988.1 IS110 family transposase ISMex9 Transposase
QA648_RS36135 (QA648_36135) 152950..153774 - 825 WP_283054970.1 IS110 family transposase ISMex9 Transposase
QA648_RS36140 (QA648_36140) 153805..154371 - 567 WP_283055081.1 transposase -
QA648_RS36145 (QA648_36145) 154549..155423 - 875 Protein_136 ISL3 family transposase ISAzs13 Transposase
QA648_RS36150 (QA648_36150) 155499..155732 - 234 Protein_137 IS21 family transposase ISRel3 Transposase
QA648_RS36155 (QA648_36155) 155731..156327 - 597 WP_283054971.1 hypothetical protein -
QA648_RS36160 (QA648_36160) 156537..156725 + 189 WP_283054972.1 hypothetical protein -
QA648_RS36165 (QA648_36165) 156753..157806 + 1054 Protein_140 IS630 family transposase -
QA648_RS36170 (QA648_36170) 158303..158536 + 234 WP_283054973.1 DUF6074 family protein -
QA648_RS36175 (QA648_36175) 158577..159038 - 462 WP_283054974.1 thermonuclease family protein -
QA648_RS36180 (QA648_36180) 159044..159379 - 336 WP_283054975.1 DUF736 family protein -
QA648_RS36185 (QA648_36185) 159438..160019 - 582 WP_283054976.1 thermonuclease family protein -
QA648_RS36190 (QA648_36190) 160016..160684 - 669 WP_283054977.1 acyltransferase -
QA648_RS36195 (QA648_36195) 160681..161130 - 450 WP_283054978.1 hypothetical protein -
QA648_RS36200 (QA648_36200) 161149..161508 - 360 WP_283054979.1 hypothetical protein -
QA648_RS36205 (QA648_36205) 161557..162027 - 471 WP_283054980.1 hypothetical protein -
QA648_RS36210 (QA648_36210) 162111..162809 + 699 WP_283054981.1 lytic transglycosylase domain-containing protein -
QA648_RS36215 (QA648_36215) 162827..163180 + 354 WP_283054982.1 TrbC/VirB2 family protein -
QA648_RS36220 (QA648_36220) 163180..163476 + 297 WP_283054983.1 hypothetical protein VF
QA648_RS36225 (QA648_36225) 163488..165932 + 2445 WP_283054984.1 Type IV secretion system protein virB4 VF
QA648_RS36230 (QA648_36230) 165929..166573 + 645 WP_283054985.1 hypothetical protein -
QA648_RS36235 (QA648_36235) 166588..167328 + 741 WP_283054986.1 type IV secretion system protein -
QA648_RS36240 (QA648_36240) 167337..167537 + 201 WP_283054987.1 hypothetical protein -
QA648_RS36245 (QA648_36245) 167552..168598 + 1047 WP_283054988.1 type IV secretion system protein -
QA648_RS36250 (QA648_36250) 168619..169350 + 732 WP_283054989.1 hypothetical protein VF
QA648_RS36255 (QA648_36255) 169347..170153 + 807 WP_283054990.1 Type IV secretion system protein virB9 VF
QA648_RS36260 (QA648_36260) 170143..171423 + 1281 WP_283054991.1 hypothetical protein VF
QA648_RS36265 (QA648_36265) 171410..172465 + 1056 WP_283054992.1 Type IV secretion system protein VirB11 VF
QA648_RS36270 (QA648_36270) 172462..174876 + 2415 WP_283054993.1 type IV secretory system conjugative DNA transfer family protein -
QA648_RS36275 (QA648_36275) 175082..175462 - 381 WP_283054994.1 DUF5615 family PIN-like protein -
QA648_RS36280 (QA648_36280) 175459..176085 - 627 WP_283054995.1 DUF433 domain-containing protein -
QA648_RS36285 (QA648_36285) 176417..177049 + 633 WP_283054996.1 hypothetical protein -
QA648_RS36290 (QA648_36290) 177154..178155 - 1002 WP_283054997.1 S1/P1 nuclease -
QA648_RS36295 (QA648_36295) 178742..180043 + 1302 WP_283054998.1 plasmid replication protein RepC -
QA648_RS36300 (QA648_36300) 180309..180599 - 291 WP_283054999.1 hypothetical protein -
QA648_RS36305 (QA648_36305) 181606..182109 - 504 WP_283055000.1 hypothetical protein -
QA648_RS36310 (QA648_36310) 182406..182750 - 345 WP_283055001.1 integration host factor subunit alpha -
QA648_RS36315 (QA648_36315) 183257..184021 + 765 WP_283055002.1 polysaccharide deacetylase family protein -
QA648_RS36320 (QA648_36320) 184326..184532 - 207 WP_283055003.1 hypothetical protein -
QA648_RS36325 (QA648_36325) 185005..185163 + 159 WP_283055004.1 hypothetical protein -
QA648_RS36330 (QA648_36330) 185239..185490 - 252 WP_283055005.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance