MGE detailed information
MGE type: Prophage MGE length: 25383 bp
Accession: NZ_CP121298 Location: 2348558..2373940 Organism: Salmonella enterica subsp. enterica strain KKP 3080 Replicon: chromosome
Accession: NZ_CP121298 Location: 2348558..2373940 Organism: Salmonella enterica subsp. enterica strain KKP 3080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1839_RS11205 () | 2344831..2345472 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| P1839_RS11210 () | 2345572..2346750 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P1839_RS11215 () | 2346881..2347171 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P1839_RS11220 () | 2347239..2347592 | + | 354 | WP_001042119.1 | protein YebF | - |
| P1839_RS11225 () | 2347686..2348345 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| P1839_RS11230 () | 2348558..2350609 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| P1839_RS11235 () | 2350644..2351342 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| P1839_RS11240 () | 2351366..2352022 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| P1839_RS11245 () | 2352130..2352360 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P1839_RS11250 () | 2352498..2352872 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| P1839_RS11255 () | 2352873..2353748 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| P1839_RS11260 () | 2353765..2354118 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2354218..2354363 | - | 146 | - | - | Antitoxin Detail |
| - | 2354258..2354361 | + | 104 | - | - | Toxin Detail |
| P1839_RS11265 () | 2354492..2355415 | - | 924 | Protein_2180 | hypothetical protein ; Integrase | Integrase |
| P1839_RS11270 () | 2355679..2356140 | - | 462 | Protein_2181 | DNA breaking-rejoining protein | - |
| P1839_RS11275 () | 2356129..2356320 | + | 192 | Protein_2182 | glycoside hydrolase family 19 protein | - |
| P1839_RS11280 () | 2356374..2356907 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| P1839_RS11285 () | 2357164..2357331 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| P1839_RS11290 () | 2357396..2357584 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| P1839_RS11295 () | 2357639..2357899 | + | 261 | Protein_2186 | DUF1441 family protein | - |
| P1839_RS11300 () | 2357901..2358116 | + | 216 | Protein_2187 | shikimate transporter | - |
| P1839_RS11305 () | 2358114..2358458 | + | 345 | Protein_2188 | macro domain-containing protein | - |
| P1839_RS11310 () | 2358468..2358938 | + | 471 | Protein_2189 | tail fiber assembly protein | - |
| P1839_RS11315 () | 2359035..2359235 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| P1839_RS11320 () | 2359625..2359805 | - | 181 | Protein_2191 | IS3 family transposase | - |
| P1839_RS11325 () | 2359805..2359930 | + | 126 | WP_000457876.1 | hypothetical protein | - |
| P1839_RS11330 () | 2360444..2360590 | - | 147 | WP_001520350.1 | hypothetical protein | - |
| P1839_RS11335 () | 2360584..2360751 | + | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| P1839_RS11340 () | 2361078..2361692 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| P1839_RS11345 () | 2361702..2361860 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P1839_RS11350 () | 2361993..2362907 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| P1839_RS11355 () | 2364210..2364632 | - | 423 | Protein_2198 | hypothetical protein ; Integrase | Integrase |
| P1839_RS11360 () | 2364702..2365896 | + | 1195 | Protein_2199 | IS256 family transposase IS285 | Transposase |
| P1839_RS11365 () | 2366042..2366182 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| P1839_RS11370 () | 2366348..2366617 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| P1839_RS11375 () | 2366987..2367406 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| P1839_RS11380 () | 2367794..2368270 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| P1839_RS11385 () | 2368600..2368995 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| P1839_RS11390 () | 2369679..2370401 | + | 723 | WP_000182072.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P1839_RS11395 () | 2370686..2370850 | + | 165 | WP_001134856.1 | membrane protein | - |
| P1839_RS11400 () | 2371074..2371724 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| P1839_RS11405 () | 2371743..2371934 | - | 192 | WP_000457836.1 | YebW family protein | - |
| P1839_RS11410 () | 2372045..2372281 | - | 237 | WP_024131108.1 | YebV family protein | - |
| P1839_RS11415 () | 2372399..2373838 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P1839_RS11420 () | 2373916..2376549 | - | 2634 | WP_001535256.1 | PqiB family protein | - |
| P1839_RS11425 () | 2376518..2377801 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| P1839_RS11430 () | 2377930..2378427 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.005 |