MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP121298 Location: 1341048..1351474 Organism: Salmonella enterica subsp. enterica strain KKP 3080 Replicon: chromosome
Accession: NZ_CP121298 Location: 1341048..1351474 Organism: Salmonella enterica subsp. enterica strain KKP 3080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P1839_RS06430 (1336161) | 1336161..1336541 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| P1839_RS06435 (1336597) | 1336597..1339164 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P1839_RS06440 (1339323) | 1339323..1339844 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| P1839_RS06445 (1340016) | 1340016..1340672 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| P1839_RS06450 (1341019) | 1341019..1341224 | + | 206 | Protein_1243 | IS5 family transposase ISEcl3 | Transposase |
| P1839_RS06455 (1341297) | 1341297..1341824 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P1839_RS06460 (1341821) | 1341821..1342111 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P1839_RS06465 (1342381) | 1342381..1342559 | - | 179 | Protein_1246 | IS3 family transposase | - |
| P1839_RS06470 (1342800) | 1342800..1343126 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| P1839_RS06475 (1343399) | 1343399..1343746 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P1839_RS06480 (1343731) | 1343731..1344180 | - | 450 | WP_000381610.1 | membrane protein | - |
| P1839_RS06485 (1344611) | 1344611..1345054 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| P1839_RS06490 (1345511) | 1345511..1346161 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| P1839_RS06495 (1346158) | 1346158..1347846 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P1839_RS06500 (1347843) | 1347843..1348961 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| P1839_RS06505 (1348986) | 1348986..1351043 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P1839_RS06510 (1351067) | 1351067..1351474 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P1839_RS06515 (1351471) | 1351471..1352766 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P1839_RS06520 (1352744) | 1352744..1353187 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| P1839_RS06525 (1353187) | 1353187..1354198 | + | 1012 | Protein_1258 | SPI-1 type III secretion system protein SpaN | - |
| P1839_RS06530 (1354198) | 1354198..1355109 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| P1839_RS06535 (1355099) | 1355099..1355773 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P1839_RS06540 (1355799) | 1355799..1356059 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |