MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 45891 bp
Accession: NZ_CP121294 Location: 3807814..3853704 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Accession: NZ_CP121294 Location: 3807814..3853704 Organism: Escherichia coli O155:H21 strain NWU_1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P9N54_RS18285 (3802985) | 3802985..3805807 | - | 2823 | WP_001007008.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| P9N54_RS18290 (3805804) | 3805804..3807177 | - | 1374 | WP_000944323.1 | conjugal transfer pilus assembly protein TraH | - |
| P9N54_RS18295 (3807164) | 3807164..3807556 | - | 393 | WP_001208954.1 | F-type conjugal transfer protein TrbF | - |
| P9N54_RS18300 (3807543) | 3807543..3807884 | - | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| P9N54_RS18305 (3807814) | 3807814..3808359 | - | 546 | WP_000059834.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| P9N54_RS18310 (3808346) | 3808346..3808630 | - | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| P9N54_RS18315 (3808711) | 3808711..3809025 | + | 315 | WP_000415565.1 | hypothetical protein | - |
| P9N54_RS18320 (3809027) | 3809027..3809374 | - | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| P9N54_RS18325 (3809390) | 3809390..3810133 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| P9N54_RS18330 (3810126) | 3810126..3810383 | - | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| P9N54_RS18335 (3810410) | 3810410..3812218 | - | 1809 | WP_000821838.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| P9N54_RS18340 (3812215) | 3812215..3812853 | - | 639 | WP_000777695.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| P9N54_RS18345 (3812862) | 3812862..3813854 | - | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| P9N54_RS18350 (3813851) | 3813851..3814483 | - | 633 | WP_001203724.1 | type-F conjugative transfer system protein TraW | - |
| P9N54_RS18355 (3814480) | 3814480..3814866 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| P9N54_RS18360 (3814863) | 3814863..3817490 | - | 2628 | WP_001064245.1 | type IV secretion system protein TraC | - |
| P9N54_RS18365 (3817650) | 3817650..3817871 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| P9N54_RS18370 (3818006) | 3818006..3818521 | - | 516 | WP_000809838.1 | type IV conjugative transfer system lipoprotein TraV | - |
| P9N54_RS18375 (3818518) | 3818518..3818769 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| P9N54_RS18380 (3818762) | 3818762..3819082 | - | 321 | WP_001057287.1 | conjugal transfer protein TrbD | - |
| P9N54_RS18385 (3819069) | 3819069..3819659 | - | 591 | WP_000002779.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| P9N54_RS18390 (3819649) | 3819649..3821076 | - | 1428 | WP_000146673.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| P9N54_RS18395 (3821076) | 3821076..3821804 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| P9N54_RS18400 (3821791) | 3821791..3822357 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| P9N54_RS18405 (3822379) | 3822379..3822690 | - | 312 | WP_000012126.1 | type IV conjugative transfer system protein TraL | - |
| P9N54_RS18410 (3822705) | 3822705..3823070 | - | 366 | WP_000340270.1 | type IV conjugative transfer system pilin TraA | - |
| P9N54_RS18415 (3823104) | 3823104..3823331 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| P9N54_RS18420 (3823425) | 3823425..3824111 | - | 687 | WP_000332492.1 | PAS domain-containing protein | - |
| P9N54_RS18425 (3824301) | 3824301..3824684 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| P9N54_RS18430 (3825006) | 3825006..3825608 | + | 603 | WP_000243701.1 | hypothetical protein | VF |
| P9N54_RS18435 (3825904) | 3825904..3826725 | - | 822 | WP_001234417.1 | DUF932 domain-containing protein | - |
| P9N54_RS18440 (3826844) | 3826844..3827131 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| P9N54_RS18445 (3827156) | 3827156..3827362 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| P9N54_RS18450 (3827432) | 3827432..3827728 | + | 297 | Protein_3631 | hypothetical protein | - |
| P9N54_RS18455 (3828029) | 3828029..3828154 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| P9N54_RS18460 (3828096) | 3828096..3828245 | - | 150 | Protein_3633 | DUF5431 family protein | - |
| - (3828252) | 3828252..3828450 | - | 199 | NuclAT_1 | - | Antitoxin Detail |
| - (3828252) | 3828252..3828450 | - | 199 | NuclAT_1 | - | Antitoxin Detail |
| - (3828252) | 3828252..3828450 | - | 199 | NuclAT_1 | - | Antitoxin Detail |
| - (3828252) | 3828252..3828450 | - | 199 | NuclAT_1 | - | Antitoxin Detail |
| P9N54_RS18465 (3828419) | 3828419..3829181 | - | 763 | Protein_3634 | plasmid SOS inhibition protein A | - |
| P9N54_RS18470 (3829178) | 3829178..3829612 | - | 435 | WP_000845928.1 | conjugation system SOS inhibitor PsiB | - |
| P9N54_RS18475 (3829667) | 3829667..3831625 | - | 1959 | WP_000117173.1 | ParB/RepB/Spo0J family partition protein | - |
| P9N54_RS18480 (3831691) | 3831691..3831924 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| P9N54_RS18485 (3831981) | 3831981..3832520 | - | 540 | WP_000290801.1 | single-stranded DNA-binding protein | - |
| P9N54_RS18490 (3832838) | 3832838..3833347 | + | 510 | WP_071600123.1 | hypothetical protein | - |
| P9N54_RS18495 (3833317) | 3833317..3833508 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| P9N54_RS18500 (3833505) | 3833505..3833927 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| P9N54_RS18505 (3833974) | 3833974..3834399 | - | 426 | WP_001198920.1 | antirestriction protein | - |
| P9N54_RS18510 (3834813) | 3834813..3835589 | - | 777 | WP_001005032.1 | hypothetical protein | - |
| P9N54_RS18515 (3835635) | 3835635..3836189 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| P9N54_RS18520 (3836083) | 3836083..3836304 | - | 222 | WP_001104904.1 | hypothetical protein | - |
| P9N54_RS18525 (3836305) | 3836305..3836988 | - | 684 | WP_000085939.1 | DNA methylase | - |
| P9N54_RS18530 (3837065) | 3837065..3837370 | - | 306 | WP_010892536.1 | hypothetical protein | - |
| P9N54_RS18535 (3837374) | 3837374..3838275 | - | 902 | Protein_3648 | DUF1281 domain-containing protein | - |
| P9N54_RS18540 (3839033) | 3839033..3840004 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| P9N54_RS18545 (3840004) | 3840004..3841170 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| P9N54_RS18550 (3841769) | 3841769..3842455 | - | 687 | WP_072301646.1 | hypothetical protein ; Integrase | Integrase |
| P9N54_RS18555 (3842456) | 3842456..3842761 | - | 306 | WP_029305600.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P9N54_RS18560 (3842763) | 3842763..3842981 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P9N54_RS18565 (3843561) | 3843561..3844649 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| P9N54_RS18570 (3844651) | 3844651..3846876 | + | 2226 | WP_040073691.1 | P-loop NTPase fold protein | - |
| P9N54_RS18575 (3846926) | 3846926..3847825 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| P9N54_RS18580 (3847815) | 3847815..3848105 | - | 291 | WP_000538310.1 | hypothetical protein | - |
| P9N54_RS18585 (3850220) | 3850220..3850861 | + | 642 | WP_000990665.1 | hypothetical protein | - |
| P9N54_RS18590 (3851701) | 3851701..3852678 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| P9N54_RS18595 (3852964) | 3852964..3853704 | - | 741 | WP_001603634.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P9N54_RS18600 (3853825) | 3853825..3853959 | - | 135 | Protein_3661 | serine/threonine protein kinase | - |
| P9N54_RS18605 (3854461) | 3854461..3855960 | - | 1500 | WP_040072489.1 | alpha/beta hydrolase | - |
| P9N54_RS18610 (3856053) | 3856053..3857000 | - | 948 | WP_001193612.1 | omptin family outer membrane protease OmpP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|