MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP121262 Location: 995309..1005735 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013 Replicon: chromosome
Accession: NZ_CP121262 Location: 995309..1005735 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain 013 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8621_RS04745 (990422) | 990422..990802 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| P8621_RS04750 (990858) | 990858..993425 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P8621_RS04755 (993584) | 993584..994105 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| P8621_RS04760 (994277) | 994277..994933 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| P8621_RS04765 (995280) | 995280..995485 | + | 206 | Protein_934 | IS5 family transposase ISEcl3 | Transposase |
| P8621_RS04770 (995558) | 995558..996085 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P8621_RS04775 (996082) | 996082..996372 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P8621_RS04780 (996642) | 996642..996820 | - | 179 | Protein_937 | IS3 family transposase | - |
| P8621_RS04785 (997061) | 997061..997387 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| P8621_RS04790 (997660) | 997660..998007 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P8621_RS04795 (997992) | 997992..998441 | - | 450 | WP_000381610.1 | membrane protein | - |
| P8621_RS04800 (998872) | 998872..999315 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| P8621_RS04805 (999772) | 999772..1000422 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| P8621_RS04810 (1000419) | 1000419..1002107 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P8621_RS04815 (1002104) | 1002104..1003222 | + | 1119 | WP_080247882.1 | Protein MxiC | VF |
| P8621_RS04820 (1003247) | 1003247..1005304 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P8621_RS04825 (1005328) | 1005328..1005735 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P8621_RS04830 (1005732) | 1005732..1007027 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P8621_RS04835 (1007005) | 1007005..1007448 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| P8621_RS04840 (1007448) | 1007448..1008458 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| P8621_RS04845 (1008458) | 1008458..1009369 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| P8621_RS04850 (1009359) | 1009359..1010033 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P8621_RS04855 (1010059) | 1010059..1010319 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |