MGE detailed information
MGE type: IScluster/Tn MGE length: 45806 bp
Accession: NZ_CP121222 Location: 93431..139236 Organism: Shigella flexneri 2a strain Sflex 21-42 Replicon: plasmid unnamed5
Accession: NZ_CP121222 Location: 93431..139236 Organism: Shigella flexneri 2a strain Sflex 21-42 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5F89_RS01250 (P5F89_01240) | 89723..89959 | + | 237 | WP_000588813.1 | phosphopantetheine-binding protein | - |
| P5F89_RS01255 (P5F89_01245) | 90176..91105 | + | 930 | WP_000227976.1 | virulence regulon transcriptional activator VirB | - |
| P5F89_RS01260 (P5F89_01250) | 92052..92831 | - | 780 | WP_005059304.1 | type III secretion system effector cysteine protease IpaJ | - |
| P5F89_RS01265 (P5F89_01255) | 93028..93837 | - | 810 | Protein_112 | IS110 family transposase | - |
| P5F89_RS01270 (P5F89_01260) | 94184..95188 | + | 1005 | WP_000255980.1 | IS21 family transposase IS100kyp | Transposase |
| P5F89_RS01275 (P5F89_01265) | 95380..96576 | + | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| P5F89_RS01280 (P5F89_01270) | 96626..97463 | - | 838 | Protein_115 | IS21 family transposase ISEc62 | Transposase |
| P5F89_RS01285 (P5F89_01275) | 97446..97787 | - | 342 | Protein_116 | IS21 family transposase ISEc62 | Transposase |
| P5F89_RS01290 (P5F89_01280) | 97902..98705 | - | 804 | Protein_117 | IS3 family transposase ISKpn38 | Transposase |
| P5F89_RS01295 (P5F89_01285) | 98746..99810 | - | 1065 | Protein_118 | IS3 family transposase IS600 | Transposase |
| P5F89_RS01300 (P5F89_01290) | 100148..101602 | - | 1455 | WP_015683184.1 | hypothetical protein | VF |
| P5F89_RS01305 (P5F89_01295) | 102175..102849 | + | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS01310 (P5F89_01300) | 102846..103196 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS01315 (P5F89_01305) | 103193..104794 | + | 1602 | WP_005063916.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS01320 (P5F89_01310) | 105048..105212 | - | 165 | WP_001346193.1 | hypothetical protein | - |
| P5F89_RS01325 (P5F89_01315) | 106114..106398 | + | 285 | WP_011114751.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P5F89_RS01330 (P5F89_01320) | 106386..106871 | + | 486 | WP_000501974.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P5F89_RS01335 (P5F89_01325) | 107044..107325 | - | 282 | Protein_126 | IS4 family transposase ISSfl1 | Transposase |
| P5F89_RS01340 (P5F89_01330) | 107392..108548 | + | 1157 | WP_094085527.1 | IS3 family transposase IS600 | Transposase |
| P5F89_RS01345 (P5F89_01335) | 108618..109891 | + | 1274 | WP_094081497.1 | IS3 family transposase IS2 | Transposase |
| P5F89_RS01350 (P5F89_01340) | 109929..110072 | + | 144 | Protein_129 | DUF3440 domain-containing protein | - |
| P5F89_RS01355 (P5F89_01345) | 110057..110695 | + | 639 | WP_000502854.1 | ParB N-terminal domain-containing protein | - |
| P5F89_RS01360 (P5F89_01350) | 110923..111347 | + | 425 | Protein_131 | hypothetical protein | - |
| P5F89_RS01365 (P5F89_01355) | 111342..112538 | - | 1197 | WP_005119583.1 | IS110 family transposase ISSfl4 | Transposase |
| P5F89_RS01370 (P5F89_01360) | 112789..113262 | + | 474 | WP_005038443.1 | HTH-type transcriptional activator RhaR | VF |
| P5F89_RS01375 (P5F89_01365) | 113351..113808 | + | 458 | Protein_134 | IS5 family transposase ISSfl7 | Transposase |
| P5F89_RS01380 (P5F89_01370) | 113874..115030 | + | 1157 | WP_094081550.1 | IS3 family transposase IS600 | Transposase |
| P5F89_RS01385 (P5F89_01375) | 115073..115483 | + | 411 | Protein_136 | IS5 family transposase ISSfl7 | Transposase |
| P5F89_RS01390 (P5F89_01380) | 115520..115651 | - | 132 | WP_000124143.1 | hypothetical protein | - |
| P5F89_RS01395 (P5F89_01385) | 115733..115926 | + | 194 | Protein_138 | HNH endonuclease signature motif containing protein | - |
| P5F89_RS01400 (P5F89_01390) | 116069..116290 | + | 222 | Protein_139 | IS66 family transposase ISCro1 | Transposase |
| P5F89_RS01405 (P5F89_01395) | 116311..116373 | - | 63 | Protein_140 | IS66 family transposase ISCro1 | Transposase |
| P5F89_RS01410 (P5F89_01400) | 116823..118235 | + | 1413 | WP_001026857.1 | hypothetical protein | VF |
| P5F89_RS01415 (P5F89_01405) | 118339..118488 | - | 150 | Protein_142 | IS1 family transposase | - |
| P5F89_RS01420 (P5F89_01410) | 118564..120261 | + | 1698 | WP_024259347.1 | hypothetical protein | VF |
| P5F89_RS01425 (P5F89_01415) | 120378..120497 | + | 120 | Protein_144 | IS66 family transposase ISCro1 | Transposase |
| P5F89_RS01430 (P5F89_01420) | 120664..120936 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| P5F89_RS01435 (P5F89_01425) | 120917..122124 | + | 1208 | WP_094085525.1 | IS91 family transposase ISSbo1 | Transposase |
| P5F89_RS01440 (P5F89_01430) | 122337..123145 | + | 809 | WP_094096897.1 | IS5 family transposase ISSfl7 | Transposase |
| P5F89_RS01445 (P5F89_01435) | 123260..124291 | + | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| P5F89_RS01450 (P5F89_01440) | 124485..125175 | + | 691 | Protein_149 | IS1 family transposase | - |
| P5F89_RS01455 (P5F89_01445) | 125192..125371 | - | 180 | Protein_150 | transposase | - |
| P5F89_RS01460 (P5F89_01450) | 125700..127397 | + | 1698 | WP_064203851.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| P5F89_RS01465 (P5F89_01455) | 127825..129549 | + | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| P5F89_RS01470 (P5F89_01460) | 129601..130809 | + | 1209 | Protein_153 | IS3 family transposase | - |
| P5F89_RS01475 (P5F89_01465) | 130852..131375 | - | 524 | Protein_154 | IS3 family transposase ISSfl11 | Transposase |
| P5F89_RS01480 (P5F89_01470) | 131443..131925 | - | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P5F89_RS01485 (P5F89_01475) | 131916..132218 | - | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P5F89_RS01490 (P5F89_01480) | 132490..132762 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| P5F89_RS01495 (P5F89_01485) | 132743..133951 | + | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| P5F89_RS01500 (P5F89_01490) | 134123..134251 | + | 129 | Protein_159 | IS5 family transposase ISSfl7 | Transposase |
| P5F89_RS01505 (P5F89_01495) | 134400..135854 | - | 1455 | WP_000701108.1 | hypothetical protein | VF |
| P5F89_RS01510 (P5F89_01500) | 136258..136877 | + | 620 | Protein_161 | IS1 family transposase IS1X2 | Transposase |
| P5F89_RS01515 (P5F89_01505) | 136927..138136 | + | 1210 | Protein_162 | IS3 family transposase | - |
| P5F89_RS01520 (P5F89_01510) | 138141..138590 | + | 450 | Protein_163 | IS66 family transposase ISEc23 | Transposase |
| P5F89_RS01525 (P5F89_01515) | 138622..139236 | + | 615 | Protein_164 | IS21 family transposase ISEc10 | Transposase |
| P5F89_RS01530 (P5F89_01520) | 139405..143500 | - | 4096 | Protein_165 | serine protease autotransporter toxin SepA | - |
| P5F89_RS01535 (P5F89_01525) | 143902..144090 | + | 189 | WP_000957853.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|