MGE detailed information
MGE type: IScluster/Tn MGE length: 21871 bp
Accession: NZ_CP121222 Location: 7996..29866 Organism: Shigella flexneri 2a strain Sflex 21-42 Replicon: plasmid unnamed5
Accession: NZ_CP121222 Location: 7996..29866 Organism: Shigella flexneri 2a strain Sflex 21-42 Replicon: plasmid unnamed5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P5F89_RS00720 (P5F89_00715) | 3081..3923 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| P5F89_RS00725 (P5F89_00720) | 4406..7318 | + | 2913 | WP_011114777.1 | ankyrin repeat domain-containing protein | - |
| P5F89_RS00730 (P5F89_00725) | 7348..7672 | - | 325 | Protein_5 | IS3 family transposase | - |
| P5F89_RS00735 (P5F89_00730) | 7670..7861 | + | 192 | Protein_6 | IS66 family insertion sequence element accessory protein TnpB | - |
| P5F89_RS00740 (P5F89_00735) | 7875..7955 | - | 81 | Protein_7 | hypothetical protein | - |
| P5F89_RS00745 (P5F89_00740) | 7996..9205 | - | 1210 | Protein_8 | IS3 family transposase | - |
| P5F89_RS00750 (P5F89_00745) | 9262..10530 | - | 1269 | Protein_9 | IS4 family transposase IS4 | Transposase |
| P5F89_RS00755 (P5F89_00750) | 10593..10859 | - | 267 | Protein_10 | IS66 family transposase ISCro1 | Transposase |
| P5F89_RS00760 (P5F89_00755) | 11216..11806 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| P5F89_RS00765 (P5F89_00760) | 11889..12058 | - | 170 | Protein_12 | type II toxin-antitoxin system toxin YacB | - |
| P5F89_RS00770 (P5F89_00765) | 12058..12327 | - | 270 | Protein_13 | type II toxin-antitoxin system antitoxin YacA | - |
| P5F89_RS00775 (P5F89_00770) | 12535..14172 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| P5F89_RS00780 | 14434..14541 | - | 108 | WP_023592908.1 | transposase domain-containing protein | - |
| P5F89_RS00785 (P5F89_00775) | 14565..14870 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| P5F89_RS00790 (P5F89_00780) | 14872..15090 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| P5F89_RS00795 (P5F89_00785) | 15626..16579 | - | 954 | Protein_18 | IS66 family transposase ISEc49 | Transposase |
| P5F89_RS00800 (P5F89_00790) | 16635..17332 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| P5F89_RS00805 (P5F89_00795) | 17558..17833 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| P5F89_RS00810 (P5F89_00800) | 17833..18117 | - | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| P5F89_RS00815 (P5F89_00805) | 18569..18820 | + | 252 | WP_015683204.1 | transporter | - |
| P5F89_RS00820 (P5F89_00810) | 18870..19079 | + | 210 | Protein_23 | peptidoglycan-binding protein | - |
| P5F89_RS00825 (P5F89_00815) | 19179..19364 | - | 186 | Protein_24 | IS21 family transposase IS100 | Transposase |
| P5F89_RS00830 (P5F89_00820) | 19553..21154 | - | 1602 | WP_011110603.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00835 (P5F89_00825) | 21174..21521 | - | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00840 (P5F89_00830) | 21518..22192 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00845 (P5F89_00835) | 22272..23314 | - | 1043 | Protein_28 | IS3 family transposase IS2 | Transposase |
| P5F89_RS00850 (P5F89_00840) | 23402..23671 | - | 270 | Protein_29 | IS3 family transposase ISEc48 | Transposase |
| P5F89_RS00855 (P5F89_00845) | 23786..24424 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| P5F89_RS00860 (P5F89_00850) | 24583..25053 | - | 471 | Protein_31 | IS1 family transposase IS1N | Transposase |
| P5F89_RS00865 (P5F89_00855) | 25252..25926 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00870 (P5F89_00860) | 25923..26273 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00875 (P5F89_00865) | 26270..26821 | + | 552 | Protein_34 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00880 (P5F89_00870) | 26879..28035 | + | 1157 | WP_094081569.1 | IS3 family transposase IS600 | Transposase |
| P5F89_RS00885 (P5F89_00875) | 28077..29138 | + | 1062 | Protein_36 | IS66 family transposase ISSfl3 | Transposase |
| P5F89_RS00890 (P5F89_00880) | 29147..29866 | + | 720 | Protein_37 | IS110 family transposase ISSfl8 | Transposase |
| P5F89_RS00895 (P5F89_00885) | 30205..30975 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| P5F89_RS00900 (P5F89_00890) | 31020..31506 | - | 487 | Protein_39 | DUF1380 family protein | - |
| P5F89_RS00905 (P5F89_00895) | 31466..31687 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| P5F89_RS00910 (P5F89_00900) | 31688..32371 | - | 684 | WP_000086135.1 | DNA methylase | - |
| P5F89_RS00915 (P5F89_00905) | 32435..32746 | - | 312 | WP_011114770.1 | hypothetical protein | - |
| P5F89_RS00920 (P5F89_00910) | 32743..33645 | - | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|