MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 101572 bp
Accession: NZ_CP121076 Location: 1541233..1642804 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.3740 Replicon: chromosome
Accession: NZ_CP121076 Location: 1541233..1642804 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.3740 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I06_RS07365 (1537006) | 1537006..1537893 | - | 888 | WP_242211996.1 | threonine/homoserine exporter RhtA | - |
| P8I06_RS07370 (1538247) | 1538247..1538762 | + | 516 | WP_000716763.1 | outer membrane protein OmpX | - |
| P8I06_RS07375 (1538825) | 1538825..1540405 | - | 1581 | WP_023993604.1 | phosphoethanolamine transferase | - |
| P8I06_RS07380 (1540670) | 1540670..1540798 | - | 129 | WP_058799727.1 | manganase accumulation protein MntS | - |
| P8I06_RS07385 (1540984) | 1540984..1541457 | + | 474 | WP_000533542.1 | manganese-binding transcriptional regulator MntR | - |
| P8I06_RS07390 (1541454) | 1541454..1542566 | + | 1113 | WP_023993606.1 | anion transporter | - |
| P8I06_RS07395 (1542610) | 1542610..1543530 | - | 921 | WP_001056404.1 | L,D-transpeptidase | - |
| P8I06_RS07400 (1543749) | 1543749..1545071 | + | 1323 | Protein_1443 | ABC-F family ATPase | - |
| P8I06_RS07405 (1545134) | 1545134..1545838 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| P8I06_RS07410 (1545948) | 1545948..1546460 | + | 513 | WP_228766823.1 | PAS domain-containing protein | - |
| P8I06_RS07415 (1546435) | 1546435..1547532 | - | 1098 | Protein_1446 | TonB-dependent receptor | - |
| P8I06_RS07420 (1547589) | 1547589..1548557 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| P8I06_RS07425 (1548592) | 1548592..1549467 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| P8I06_RS07430 (1549717) | 1549717..1549908 | - | 192 | Protein_1449 | IS1380 family transposase | - |
| P8I06_RS07435 (1549972) | 1549972..1550100 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| P8I06_RS07440 (1550421) | 1550421..1551125 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| P8I06_RS07445 (1551204) | 1551204..1551707 | + | 504 | WP_075322284.1 | sulfite exporter TauE/SafE family protein | - |
| P8I06_RS07450 (1551770) | 1551770..1552138 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| P8I06_RS07455 (1552212) | 1552212..1553969 | - | 1758 | WP_011117602.1 | Arsenical pump-driving ATPase | VF |
| P8I06_RS07460 (1553990) | 1553990..1554352 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| P8I06_RS07465 (1554428) | 1554428..1554973 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| P8I06_RS07470 (1554982) | 1554982..1555632 | - | 651 | WP_001360294.1 | arsenical resistance protein ArsH | - |
| P8I06_RS07475 (1555793) | 1555793..1556116 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| P8I06_RS07480 (1556221) | 1556221..1557258 | + | 1038 | WP_044502555.1 | permease | - |
| P8I06_RS07485 (1557551) | 1557551..1558168 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| P8I06_RS07490 (1558359) | 1558359..1559915 | - | 1557 | WP_058649952.1 | AAA family ATPase | - |
| P8I06_RS07495 (1560178) | 1560178..1560768 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| P8I06_RS07500 (1560768) | 1560768..1561025 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| P8I06_RS07505 (1561379) | 1561379..1563517 | + | 2139 | WP_075322282.1 | AAA family ATPase | - |
| P8I06_RS07510 (1563679) | 1563679..1564095 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P8I06_RS07515 (1564092) | 1564092..1564322 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P8I06_RS07520 (1564630) | 1564630..1566195 | + | 1566 | WP_000741348.1 | AAA family ATPase | - |
| P8I06_RS07525 (1566252) | 1566252..1567121 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| P8I06_RS07530 (1567123) | 1567123..1568211 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| P8I06_RS07535 (1568509) | 1568509..1569441 | - | 933 | WP_000991830.1 | S-4TM family putative pore-forming effector | - |
| P8I06_RS07540 (1569445) | 1569445..1570440 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| P8I06_RS07545 (1571121) | 1571121..1571435 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| P8I06_RS07550 (1571497) | 1571497..1572267 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| P8I06_RS07555 (1572312) | 1572312..1573097 | + | 786 | WP_077249540.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I06_RS07560 (1573235) | 1573235..1573510 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| P8I06_RS07565 (1573504) | 1573504..1574148 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| P8I06_RS07570 (1574377) | 1574377..1575348 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| P8I06_RS07575 (1575353) | 1575353..1575745 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| P8I06_RS07580 (1575750) | 1575750..1577021 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| P8I06_RS07585 (1577021) | 1577021..1577458 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P8I06_RS07590 (1577455) | 1577455..1577703 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P8I06_RS07595 (1578121) | 1578121..1579023 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| P8I06_RS07600 (1579027) | 1579027..1579332 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| P8I06_RS07605 (1579408) | 1579408..1580091 | + | 684 | WP_000086137.1 | DNA methylase | - |
| P8I06_RS07610 (1580092) | 1580092..1580313 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| P8I06_RS07615 (1580243) | 1580243..1580761 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| P8I06_RS07620 (1580806) | 1580806..1581576 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| P8I06_RS07625 (1581994) | 1581994..1582419 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| P8I06_RS07630 (1582466) | 1582466..1582888 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| P8I06_RS07635 (1582885) | 1582885..1583076 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| P8I06_RS07640 (1583410) | 1583410..1583478 | - | 69 | Protein_1491 | pilus protein | - |
| P8I06_RS07645 (1583847) | 1583847..1584374 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| P8I06_RS07650 (1584432) | 1584432..1584665 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| P8I06_RS07655 (1584724) | 1584724..1586682 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| P8I06_RS07660 (1586737) | 1586737..1587171 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| P8I06_RS07665 (1587168) | 1587168..1587887 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| P8I06_RS07670 (1587884) | 1587884..1588480 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| P8I06_RS07675 (1588943) | 1588943..1589443 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| P8I06_RS07680 (1590172) | 1590172..1590606 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| P8I06_RS07685 (1590699) | 1590699..1590965 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| P8I06_RS07690 (1591030) | 1591030..1591944 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| P8I06_RS07695 (1591944) | 1591944..1592189 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| P8I06_RS07700 (1592220) | 1592220..1592471 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| P8I06_RS07705 (1593051) | 1593051..1593899 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| P8I06_RS07710 (1593985) | 1593985..1594320 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| P8I06_RS07715 (1594554) | 1594554..1594886 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| P8I06_RS07720 (1594897) | 1594897..1597596 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| P8I06_RS07725 (1597633) | 1597633..1599924 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| P8I06_RS07730 (1599917) | 1599917..1600987 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| P8I06_RS07735 (1601006) | 1601006..1602214 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| P8I06_RS07740 (1602521) | 1602521..1603300 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (1603815) | 1603815..1603875 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603815) | 1603815..1603875 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603815) | 1603815..1603875 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| - (1603815) | 1603815..1603875 | - | 61 | NuclAT_1 | - | Antitoxin Detail |
| P8I06_RS07745 (1603927) | 1603927..1604079 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| P8I06_RS07750 (1604151) | 1604151..1604402 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| P8I06_RS07755 (1604903) | 1604903..1604998 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| P8I06_RS07760 (1605063) | 1605063..1605239 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| P8I06_RS07765 (1605631) | 1605631..1605840 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| P8I06_RS07770 (1605912) | 1605912..1606574 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| P8I06_RS07775 (1606645) | 1606645..1608813 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| P8I06_RS07780 (1608910) | 1608910..1609494 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| P8I06_RS07785 (1609523) | 1609523..1610725 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| P8I06_RS07790 (1610692) | 1610692..1611306 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| P8I06_RS07795 (1611306) | 1611306..1614350 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| P8I06_RS07800 (1614440) | 1614440..1615240 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| P8I06_RS07805 (1615224) | 1615224..1615412 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| P8I06_RS07810 (1615476) | 1615476..1615880 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| P8I06_RS07815 (1615931) | 1615931..1616458 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| P8I06_RS07820 (1616458) | 1616458..1617162 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| P8I06_RS07825 (1617162) | 1617162..1618451 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| P8I06_RS07830 (1618454) | 1618454..1619437 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| P8I06_RS07835 (1619448) | 1619448..1620140 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| P8I06_RS07840 (1620137) | 1620137..1620484 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| P8I06_RS07845 (1620502) | 1620502..1624269 | - | 3768 | WP_058649948.1 | DUF5710 domain-containing protein | - |
| P8I06_RS07850 (1624359) | 1624359..1624910 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| P8I06_RS07855 (1624925) | 1624925..1625215 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| P8I06_RS07860 (1625212) | 1625212..1626360 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| P8I06_RS07865 (1626357) | 1626357..1627175 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| P8I06_RS07870 (1627172) | 1627172..1627630 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| P8I06_RS07875 (1628025) | 1628025..1628609 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| P8I06_RS07880 (1628669) | 1628669..1629871 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| P8I06_RS07885 (1629957) | 1629957..1630781 | - | 825 | WP_058649947.1 | conjugal transfer protein TraE | - |
| P8I06_RS07890 (1630932) | 1630932..1632086 | - | 1155 | WP_001139955.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I06_RS07895 (1632776) | 1632776..1633024 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| P8I06_RS07900 (1633021) | 1633021..1634313 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| P8I06_RS07905 (1634313) | 1634313..1634969 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| P8I06_RS07910 (1634954) | 1634954..1635514 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| P8I06_RS07915 (1635524) | 1635524..1636138 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| P8I06_RS07920 (1636155) | 1636155..1637240 | - | 1086 | WP_001208803.1 | hypothetical protein | VF |
| P8I06_RS07925 (1637253) | 1637253..1638806 | - | 1554 | WP_000362204.1 | hypothetical protein | VF |
| P8I06_RS07930 (1638817) | 1638817..1639269 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| P8I06_RS07935 (1639256) | 1639256..1640551 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| P8I06_RS07940 (1640544) | 1640544..1642226 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| P8I06_RS07945 (1642240) | 1642240..1642677 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| P8I06_RS07950 (1642677) | 1642677..1643744 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| P8I06_RS07955 (1644716) | 1644716..1644976 | - | 261 | WP_023994105.1 | hypothetical protein | - |
| P8I06_RS07960 (1645237) | 1645237..1645491 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| P8I06_RS07965 (1645663) | 1645663..1646346 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| P8I06_RS07970 (1646599) | 1646599..1647132 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|