MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP121075 Location: 1343042..1353432 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.2574 Replicon: chromosome
Accession: NZ_CP121075 Location: 1343042..1353432 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.2574 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I05_RS06445 (1338120) | 1338120..1338500 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| P8I05_RS06450 (1338556) | 1338556..1341123 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P8I05_RS06455 (1341282) | 1341282..1341803 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| P8I05_RS06460 (1341974) | 1341974..1342630 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| P8I05_RS06465 (1342965) | 1342965..1343182 | + | 218 | Protein_1252 | IS5 family transposase ISEcl3 | Transposase |
| P8I05_RS06470 (1343255) | 1343255..1343782 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P8I05_RS06475 (1343779) | 1343779..1344069 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P8I05_RS06480 (1344339) | 1344339..1344517 | - | 179 | Protein_1255 | IS3 family transposase | - |
| P8I05_RS06485 (1344758) | 1344758..1345084 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| P8I05_RS06490 (1345357) | 1345357..1345704 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P8I05_RS06495 (1345689) | 1345689..1346138 | - | 450 | WP_000381612.1 | membrane protein | - |
| P8I05_RS06500 (1346570) | 1346570..1347013 | - | 444 | WP_023993678.1 | Type 3 secretion system pilotin | VF |
| P8I05_RS06505 (1347469) | 1347469..1348119 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| P8I05_RS06510 (1348116) | 1348116..1349804 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P8I05_RS06515 (1349801) | 1349801..1350919 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| P8I05_RS06520 (1350944) | 1350944..1353001 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P8I05_RS06525 (1353025) | 1353025..1353432 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P8I05_RS06530 (1353429) | 1353429..1354724 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P8I05_RS06535 (1354702) | 1354702..1355145 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| P8I05_RS06540 (1355145) | 1355145..1356155 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| P8I05_RS06545 (1356155) | 1356155..1357066 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| P8I05_RS06550 (1357056) | 1357056..1357730 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P8I05_RS06555 (1357756) | 1357756..1358016 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.007 |