MGE detailed information
MGE type: Genomic_island MGE length: 10391 bp
Accession: NZ_CP121070 Location: 1013843..1024233 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.0044 Replicon: chromosome
Accession: NZ_CP121070 Location: 1013843..1024233 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R22.0044 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I10_RS04815 (1008921) | 1008921..1009301 | + | 381 | WP_023993675.1 | DUF4440 domain-containing protein | - |
| P8I10_RS04820 (1009357) | 1009357..1011924 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| P8I10_RS04825 (1012083) | 1012083..1012604 | + | 522 | WP_023994250.1 | hypothetical protein | - |
| P8I10_RS04830 (1012775) | 1012775..1013431 | - | 657 | WP_000420451.1 | protein-serine/threonine phosphatase | - |
| P8I10_RS04835 (1013766) | 1013766..1013983 | + | 218 | Protein_946 | IS5 family transposase ISEcl3 | Transposase |
| P8I10_RS04840 (1014056) | 1014056..1014583 | - | 528 | WP_023994249.1 | GNAT family N-acetyltransferase | Toxin Detail |
| P8I10_RS04845 (1014580) | 1014580..1014870 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| P8I10_RS04850 (1015140) | 1015140..1015318 | - | 179 | Protein_949 | IS3 family transposase | - |
| P8I10_RS04855 (1015559) | 1015559..1015885 | + | 327 | WP_000393300.1 | hypothetical protein | - |
| P8I10_RS04860 (1016158) | 1016158..1016505 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| P8I10_RS04865 (1016490) | 1016490..1016939 | - | 450 | WP_000381612.1 | membrane protein | - |
| P8I10_RS04870 (1017371) | 1017371..1017814 | - | 444 | WP_023993678.1 | Type 3 secretion system pilotin | VF |
| P8I10_RS04875 (1018270) | 1018270..1018920 | + | 651 | WP_001728903.1 | Invasion protein InvF | VF |
| P8I10_RS04880 (1018917) | 1018917..1020605 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| P8I10_RS04885 (1020602) | 1020602..1021720 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| P8I10_RS04890 (1021745) | 1021745..1023802 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| P8I10_RS04895 (1023826) | 1023826..1024233 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| P8I10_RS04900 (1024230) | 1024230..1025525 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| P8I10_RS04905 (1025503) | 1025503..1025946 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| P8I10_RS04910 (1025946) | 1025946..1026956 | + | 1011 | WP_000503101.1 | SPI-1 type III secretion system protein SpaN | - |
| P8I10_RS04915 (1026956) | 1026956..1027867 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| P8I10_RS04920 (1027857) | 1027857..1028531 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| P8I10_RS04925 (1028557) | 1028557..1028817 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |