MGE detailed information
MGE type: Prophage MGE length: 30657 bp
Accession: NZ_CP121068 Location: 2624875..2655531 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Accession: NZ_CP121068 Location: 2624875..2655531 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I08_RS12790 () | 2620311..2621684 | + | 1374 | WP_000416139.1 | MFS transporter | - |
| P8I08_RS12795 () | 2621732..2622613 | - | 882 | WP_000984498.1 | protease HtpX | - |
| P8I08_RS12800 () | 2622807..2624855 | - | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| P8I08_RS12805 () | 2624875..2625561 | - | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| P8I08_RS12810 () | 2625659..2626156 | - | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| P8I08_RS12815 () | 2626285..2627568 | + | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| P8I08_RS12820 () | 2627537..2630170 | + | 2634 | WP_001529852.1 | Intermembrane transport protein YebT | VF |
| P8I08_RS12825 () | 2630248..2631687 | + | 1440 | WP_023993322.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| P8I08_RS12830 () | 2631805..2632041 | + | 237 | WP_024131167.1 | YebV family protein | - |
| P8I08_RS12835 () | 2632152..2632343 | + | 192 | WP_000457838.1 | DUF1482 family protein | - |
| P8I08_RS12840 () | 2632362..2633012 | - | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| P8I08_RS12845 () | 2633237..2633401 | - | 165 | WP_001134857.1 | hypothetical protein | - |
| P8I08_RS12850 () | 2633686..2634408 | - | 723 | WP_000182074.1 | Guanine nucleotide exchange factor sopE2 | VF |
| P8I08_RS12855 () | 2635092..2635487 | + | 396 | WP_000422890.1 | DUF1398 domain-containing protein | - |
| P8I08_RS12860 () | 2635817..2636293 | + | 477 | WP_023218584.1 | hypothetical protein | - |
| P8I08_RS12865 () | 2636680..2637099 | - | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| P8I08_RS12870 () | 2637472..2637741 | + | 270 | WP_012664556.1 | hypothetical protein | - |
| P8I08_RS12875 () | 2637907..2638047 | + | 141 | WP_001576018.1 | hypothetical protein | - |
| P8I08_RS12880 () | 2638193..2639401 | - | 1209 | WP_023993323.1 | IS256 family transposase ISEc39 | Transposase |
| P8I08_RS12885 () | 2639471..2639894 | + | 424 | Protein_2525 | tyrosine-type recombinase/integrase | - |
| P8I08_RS12890 () | 2641184..2642098 | + | 915 | WP_001233445.1 | DMT family transporter | - |
| P8I08_RS12895 () | 2642231..2642389 | + | 159 | WP_000480735.1 | DUF5993 family protein | - |
| P8I08_RS12900 () | 2642399..2643013 | + | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| P8I08_RS12905 () | 2643340..2643507 | - | 168 | WP_001751917.1 | helix-turn-helix domain-containing protein | - |
| P8I08_RS12910 () | 2643501..2643647 | + | 147 | WP_001520350.1 | hypothetical protein | - |
| P8I08_RS12915 () | 2644161..2644286 | - | 126 | WP_000457876.1 | hypothetical protein | - |
| P8I08_RS12920 () | 2644286..2644466 | + | 181 | Protein_2532 | IS3 family transposase | - |
| P8I08_RS12925 () | 2644856..2645056 | + | 201 | Protein_2533 | PagK family vesicle-borne virulence factor | - |
| P8I08_RS12930 () | 2645153..2645664 | - | 512 | Protein_2534 | tail fiber assembly protein | - |
| P8I08_RS12935 () | 2645677..2645964 | - | 288 | Protein_2535 | macro domain-containing protein | - |
| P8I08_RS12940 () | 2645974..2646189 | - | 216 | Protein_2536 | shikimate transporter | - |
| P8I08_RS12945 () | 2646191..2646451 | - | 261 | Protein_2537 | DUF1441 family protein | - |
| P8I08_RS12950 () | 2646759..2646926 | + | 168 | WP_000789529.1 | lytic enzyme | - |
| P8I08_RS12955 () | 2647183..2647716 | - | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| P8I08_RS12960 () | 2647770..2647961 | - | 192 | Protein_2540 | glycoside hydrolase family 19 protein | - |
| P8I08_RS12965 () | 2647950..2648411 | + | 462 | Protein_2541 | DNA breaking-rejoining protein | - |
| P8I08_RS12970 () | 2648675..2649568 | + | 894 | Protein_2542 | hypothetical protein ; Integrase | Integrase |
| - | 2649726..2649869 | + | 144 | - | - | Antitoxin Detail |
| - | 2649728..2649831 | - | 104 | - | - | Toxin Detail |
| P8I08_RS12975 () | 2649971..2650324 | - | 354 | WP_000722368.1 | YebY family protein | - |
| P8I08_RS12980 () | 2650341..2651216 | - | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| P8I08_RS12985 () | 2651217..2651591 | - | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| P8I08_RS12990 () | 2651729..2651959 | + | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| P8I08_RS12995 () | 2652067..2652723 | + | 657 | WP_000100256.1 | nitrilase-related carbon-nitrogen hydrolase | - |
| P8I08_RS13000 () | 2652747..2653445 | + | 699 | WP_000944278.1 | exodeoxyribonuclease X | - |
| P8I08_RS13005 () | 2653480..2655531 | - | 2052 | WP_000936990.1 | oligopeptidase B | - |
| P8I08_RS13010 () | 2655745..2656404 | - | 660 | WP_023993328.1 | tellurite resistance TerB family protein | - |
| P8I08_RS13015 () | 2656498..2656851 | - | 354 | WP_001042123.1 | protein YebF | - |
| P8I08_RS13020 () | 2656919..2657209 | - | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| P8I08_RS13025 () | 2657340..2658518 | + | 1179 | WP_000173429.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| P8I08_RS13030 () | 2658618..2659259 | - | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.009 |