MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 101572 bp
Accession: NZ_CP121068 Location: 1548059..1649630 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Accession: NZ_CP121068 Location: 1548059..1649630 Organism: Salmonella enterica subsp. enterica serovar Infantis strain R21.1575 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| P8I08_RS07400 (1543832) | 1543832..1544719 | - | 888 | WP_001119554.1 | threonine/homoserine exporter RhtA | - |
| P8I08_RS07405 (1545073) | 1545073..1545588 | + | 516 | WP_000716763.1 | outer membrane protein OmpX | - |
| P8I08_RS07410 (1545651) | 1545651..1547231 | - | 1581 | WP_023993604.1 | phosphoethanolamine transferase | - |
| P8I08_RS07415 (1547496) | 1547496..1547624 | - | 129 | WP_058799727.1 | manganase accumulation protein MntS | - |
| P8I08_RS07420 (1547810) | 1547810..1548283 | + | 474 | WP_000533542.1 | manganese-binding transcriptional regulator MntR | - |
| P8I08_RS07425 (1548280) | 1548280..1549392 | + | 1113 | WP_023993606.1 | anion transporter | - |
| P8I08_RS07430 (1549436) | 1549436..1550356 | - | 921 | WP_001056404.1 | L,D-transpeptidase | - |
| P8I08_RS07435 (1550575) | 1550575..1551897 | + | 1323 | Protein_1450 | ABC-F family ATPase | - |
| P8I08_RS07440 (1551960) | 1551960..1552664 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| P8I08_RS07445 (1552726) | 1552726..1553286 | + | 561 | Protein_1452 | PAS domain-containing protein | - |
| P8I08_RS07450 (1553261) | 1553261..1554358 | - | 1098 | Protein_1453 | TonB-dependent receptor | - |
| P8I08_RS07455 (1554415) | 1554415..1555383 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| P8I08_RS07460 (1555418) | 1555418..1556293 | - | 876 | WP_013188475.1 | Beta-lactamase Toho-1 | ARG |
| P8I08_RS07465 (1556543) | 1556543..1556734 | - | 192 | Protein_1456 | IS1380 family transposase | - |
| P8I08_RS07470 (1556798) | 1556798..1556926 | - | 129 | WP_002210551.1 | hypothetical protein | - |
| P8I08_RS07475 (1557247) | 1557247..1557951 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| P8I08_RS07480 (1558030) | 1558030..1558533 | + | 504 | WP_075322284.1 | sulfite exporter TauE/SafE family protein | - |
| P8I08_RS07485 (1558596) | 1558596..1558964 | + | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| P8I08_RS07490 (1559038) | 1559038..1560795 | - | 1758 | WP_011117602.1 | Arsenical pump-driving ATPase | VF |
| P8I08_RS07495 (1560816) | 1560816..1561178 | - | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| P8I08_RS07500 (1561254) | 1561254..1561799 | - | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| P8I08_RS07505 (1561808) | 1561808..1562458 | - | 651 | WP_001360294.1 | arsenical resistance protein ArsH | - |
| P8I08_RS07510 (1562619) | 1562619..1562942 | - | 324 | WP_001175594.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| P8I08_RS07515 (1563047) | 1563047..1564084 | + | 1038 | WP_044502555.1 | permease | - |
| P8I08_RS07520 (1564377) | 1564377..1564994 | - | 618 | WP_000521603.1 | ProQ/FINO family protein | - |
| P8I08_RS07525 (1565185) | 1565185..1566741 | - | 1557 | WP_058649952.1 | AAA family ATPase | - |
| P8I08_RS07530 (1567004) | 1567004..1567594 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| P8I08_RS07535 (1567594) | 1567594..1567851 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| P8I08_RS07540 (1568205) | 1568205..1570343 | + | 2139 | WP_075322282.1 | AAA family ATPase | - |
| P8I08_RS07545 (1570505) | 1570505..1570921 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| P8I08_RS07550 (1570918) | 1570918..1571148 | - | 231 | WP_001261287.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| P8I08_RS07555 (1571456) | 1571456..1573021 | + | 1566 | WP_000741348.1 | AAA family ATPase | - |
| P8I08_RS07560 (1573078) | 1573078..1573947 | - | 870 | WP_000253407.1 | hypothetical protein | - |
| P8I08_RS07565 (1573949) | 1573949..1575037 | - | 1089 | WP_000952231.1 | hypothetical protein | - |
| P8I08_RS07570 (1575335) | 1575335..1576267 | - | 933 | WP_000991830.1 | S-4TM family putative pore-forming effector | - |
| P8I08_RS07575 (1576271) | 1576271..1577266 | - | 996 | WP_000246635.1 | hypothetical protein | - |
| P8I08_RS07580 (1577947) | 1577947..1578261 | + | 315 | WP_001302628.1 | hypothetical protein | - |
| P8I08_RS07585 (1578323) | 1578323..1579093 | + | 771 | WP_001302622.1 | hypothetical protein | - |
| P8I08_RS07590 (1579138) | 1579138..1579923 | + | 786 | WP_077249540.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I08_RS07595 (1580061) | 1580061..1580336 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| P8I08_RS07600 (1580330) | 1580330..1580974 | - | 645 | WP_000633913.1 | division plane positioning ATPase MipZ | - |
| P8I08_RS07605 (1581203) | 1581203..1582174 | + | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| P8I08_RS07610 (1582179) | 1582179..1582571 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| P8I08_RS07615 (1582576) | 1582576..1583847 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| P8I08_RS07620 (1583847) | 1583847..1584284 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| P8I08_RS07625 (1584281) | 1584281..1584529 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| P8I08_RS07630 (1584947) | 1584947..1585849 | + | 903 | WP_001330417.1 | DUF1281 domain-containing protein | - |
| P8I08_RS07635 (1585853) | 1585853..1586158 | + | 306 | WP_013307862.1 | hypothetical protein | - |
| P8I08_RS07640 (1586234) | 1586234..1586917 | + | 684 | WP_000086137.1 | DNA methylase | - |
| P8I08_RS07645 (1586918) | 1586918..1587139 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| P8I08_RS07650 (1587069) | 1587069..1587587 | + | 519 | WP_223168556.1 | DUF1380 family protein | - |
| P8I08_RS07655 (1587632) | 1587632..1588402 | + | 771 | WP_052980418.1 | hypothetical protein | - |
| P8I08_RS07660 (1588820) | 1588820..1589245 | + | 426 | WP_001198941.1 | antirestriction protein | - |
| P8I08_RS07665 (1589292) | 1589292..1589714 | + | 423 | WP_000271741.1 | DUF1380 family protein | - |
| P8I08_RS07670 (1589711) | 1589711..1589902 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| P8I08_RS07675 (1590236) | 1590236..1590304 | - | 69 | Protein_1498 | pilus protein | - |
| P8I08_RS07680 (1590673) | 1590673..1591200 | + | 528 | WP_001276125.1 | single-stranded DNA-binding protein | - |
| P8I08_RS07685 (1591258) | 1591258..1591491 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| P8I08_RS07690 (1591550) | 1591550..1593508 | + | 1959 | WP_058649951.1 | ParB/RepB/Spo0J family partition protein | - |
| P8I08_RS07695 (1593563) | 1593563..1593997 | + | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| P8I08_RS07700 (1593994) | 1593994..1594713 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| P8I08_RS07705 (1594710) | 1594710..1595306 | + | 597 | WP_000978005.1 | hypothetical protein | - |
| P8I08_RS07710 (1595769) | 1595769..1596269 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| P8I08_RS07715 (1596998) | 1596998..1597432 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| P8I08_RS07720 (1597525) | 1597525..1597791 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| P8I08_RS07725 (1597856) | 1597856..1598770 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| P8I08_RS07730 (1598770) | 1598770..1599015 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| P8I08_RS07735 (1599046) | 1599046..1599297 | - | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| P8I08_RS07740 (1599877) | 1599877..1600725 | + | 849 | WP_058649950.1 | DUF4942 domain-containing protein | - |
| P8I08_RS07745 (1600811) | 1600811..1601146 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| P8I08_RS07750 (1601380) | 1601380..1601712 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| P8I08_RS07755 (1601723) | 1601723..1604422 | + | 2700 | WP_006855641.1 | IncI1-type relaxase NikB | - |
| P8I08_RS07760 (1604459) | 1604459..1606750 | - | 2292 | WP_001289275.1 | F-type conjugative transfer protein TrbC | - |
| P8I08_RS07765 (1606743) | 1606743..1607813 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| P8I08_RS07770 (1607832) | 1607832..1609040 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| P8I08_RS07775 (1609347) | 1609347..1610126 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (1610641) | 1610641..1610701 | - | 61 | NuclAT_1 | - | - |
| - (1610641) | 1610641..1610701 | - | 61 | NuclAT_1 | - | - |
| - (1610641) | 1610641..1610701 | - | 61 | NuclAT_1 | - | - |
| - (1610641) | 1610641..1610701 | - | 61 | NuclAT_1 | - | - |
| P8I08_RS07780 (1610753) | 1610753..1610905 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| P8I08_RS07785 (1610977) | 1610977..1611228 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| P8I08_RS07790 (1611729) | 1611729..1611824 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| P8I08_RS07795 (1611889) | 1611889..1612065 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| P8I08_RS07800 (1612457) | 1612457..1612666 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| P8I08_RS07805 (1612738) | 1612738..1613400 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| P8I08_RS07810 (1613471) | 1613471..1615639 | - | 2169 | WP_058649949.1 | DotA/TraY family protein | - |
| P8I08_RS07815 (1615736) | 1615736..1616320 | - | 585 | WP_001037996.1 | IncI1-type conjugal transfer protein TraX | - |
| P8I08_RS07820 (1616349) | 1616349..1617551 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| P8I08_RS07825 (1617518) | 1617518..1618132 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| P8I08_RS07830 (1618132) | 1618132..1621176 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| P8I08_RS07835 (1621266) | 1621266..1622066 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| P8I08_RS07840 (1622050) | 1622050..1622238 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| P8I08_RS07845 (1622302) | 1622302..1622706 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| P8I08_RS07850 (1622757) | 1622757..1623284 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| P8I08_RS07855 (1623284) | 1623284..1623988 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| P8I08_RS07860 (1623988) | 1623988..1625277 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| P8I08_RS07865 (1625280) | 1625280..1626263 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| P8I08_RS07870 (1626274) | 1626274..1626966 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| P8I08_RS07875 (1626963) | 1626963..1627310 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| P8I08_RS07880 (1627328) | 1627328..1631095 | - | 3768 | WP_058649948.1 | DUF5710 domain-containing protein | - |
| P8I08_RS07885 (1631185) | 1631185..1631736 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| P8I08_RS07890 (1631751) | 1631751..1632041 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| P8I08_RS07895 (1632038) | 1632038..1633186 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| P8I08_RS07900 (1633183) | 1633183..1634001 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| P8I08_RS07905 (1633998) | 1633998..1634456 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| P8I08_RS07910 (1634851) | 1634851..1635435 | - | 585 | WP_000977520.1 | histidine phosphatase family protein | - |
| P8I08_RS07915 (1635495) | 1635495..1636697 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| P8I08_RS07920 (1636783) | 1636783..1637607 | - | 825 | WP_058649947.1 | conjugal transfer protein TraE | - |
| P8I08_RS07925 (1637758) | 1637758..1638912 | - | 1155 | WP_001139955.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| P8I08_RS07930 (1639602) | 1639602..1639850 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| P8I08_RS07935 (1639847) | 1639847..1641139 | - | 1293 | WP_039719938.1 | hypothetical protein | VF |
| P8I08_RS07940 (1641139) | 1641139..1641795 | - | 657 | WP_001193551.1 | hypothetical protein | VF |
| P8I08_RS07945 (1641780) | 1641780..1642340 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| P8I08_RS07950 (1642350) | 1642350..1642964 | - | 615 | WP_000908228.1 | hypothetical protein | VF |
| P8I08_RS07955 (1642981) | 1642981..1644066 | - | 1086 | WP_001208803.1 | hypothetical protein | VF |
| P8I08_RS07960 (1644079) | 1644079..1645632 | - | 1554 | WP_000362204.1 | hypothetical protein | VF |
| P8I08_RS07965 (1645643) | 1645643..1646095 | - | 453 | WP_058649963.1 | hypothetical protein | VF |
| P8I08_RS07970 (1646082) | 1646082..1647377 | - | 1296 | WP_058649964.1 | type 4b pilus protein PilO2 | - |
| P8I08_RS07975 (1647370) | 1647370..1649052 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| P8I08_RS07980 (1649066) | 1649066..1649503 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| P8I08_RS07985 (1649503) | 1649503..1650570 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| P8I08_RS07990 (1651542) | 1651542..1651802 | - | 261 | WP_023994105.1 | hypothetical protein | - |
| P8I08_RS07995 (1652063) | 1652063..1652317 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| P8I08_RS08000 (1652489) | 1652489..1653172 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| P8I08_RS08005 (1653425) | 1653425..1653958 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|